RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 PTHP01270 115 aa17.25■□□□□ 0.35
COL9A3-202ENST00000452372 FCGR1AP12314 374 aa17.25■□□□□ 0.35
COL9A3-202ENST00000452372 PAX1P15863 534 aa17.25■□□□□ 0.35
COL9A3-202ENST00000452372 ENDOGQ14249 297 aaKnown RBP17.25■□□□□ 0.35
COL9A3-202ENST00000452372 SLC36A3Q495N2 470 aa17.25■□□□□ 0.35
COL9A3-202ENST00000452372 UGT2A3Q6UWM9 527 aa17.25■□□□□ 0.35
COL9A3-202ENST00000452372 PRSS57Q6UWY2 283 aa17.25■□□□□ 0.35
COL9A3-202ENST00000452372 YTHDF3Q7Z739 585 aaKnown RBP17.25■□□□□ 0.35
COL9A3-202ENST00000452372 ZBTB46Q86UZ6 589 aa17.25■□□□□ 0.35
COL9A3-202ENST00000452372 OR6V1Q8N148 313 aa17.25■□□□□ 0.35
COL9A3-202ENST00000452372 SDR9C7Q8NEX9 313 aa17.25■□□□□ 0.35
COL9A3-202ENST00000452372 OR2T33Q8NG76 320 aa17.25■□□□□ 0.35
COL9A3-202ENST00000452372 OR4Q3Q8NH05 313 aa17.25■□□□□ 0.35
COL9A3-202ENST00000452372 OR5K1Q8NHB7 308 aa17.25■□□□□ 0.35
COL9A3-202ENST00000452372 ZNF416Q9BWM5 594 aa17.25■□□□□ 0.35
COL9A3-202ENST00000452372 EMC7Q9NPA0 242 aa17.25■□□□□ 0.35
COL9A3-202ENST00000452372 CA10Q9NS85 328 aa17.25■□□□□ 0.35
COL9A3-202ENST00000452372 ZNF701Q9NV72 531 aaPredicted RBP17.25■□□□□ 0.35
COL9A3-202ENST00000452372 TIMM10BQ9Y5J6 103 aa17.25■□□□□ 0.35
COL9A3-202ENST00000452372 IGLV1-36A0A0B4J1U3 117 aa17.24■□□□□ 0.35
COL9A3-202ENST00000452372 IQCMA0A1B0GVH7 501 aa17.24■□□□□ 0.35
COL9A3-202ENST00000452372 C12orf71A8MTZ7 269 aa17.24■□□□□ 0.35
COL9A3-202ENST00000452372 H3BN98 237 aa17.24■□□□□ 0.35
COL9A3-202ENST00000452372 NR4A1P22736 598 aa17.24■□□□□ 0.35
COL9A3-202ENST00000452372 LSM6P62312 80 aaKnown RBP17.24■□□□□ 0.35
COL9A3-202ENST00000452372 PSG4Q00888 419 aa17.24■□□□□ 0.35
COL9A3-202ENST00000452372 HSF2Q03933 536 aa17.24■□□□□ 0.35
COL9A3-202ENST00000452372 KPNB1Q14974 876 aaKnown RBP17.24■□□□□ 0.35
COL9A3-202ENST00000452372 KCNMB1Q16558 191 aa17.24■□□□□ 0.35
COL9A3-202ENST00000452372 PABPC1L2AQ5JQF8 200 aa17.24■□□□□ 0.35
COL9A3-202ENST00000452372 ATG16L2Q8NAA4 619 aa17.24■□□□□ 0.35
COL9A3-202ENST00000452372 SLC30A7Q8NEW0 376 aa17.24■□□□□ 0.35
COL9A3-202ENST00000452372 TEX47Q8TBZ9 253 aa17.24■□□□□ 0.35
COL9A3-202ENST00000452372 LRTOMTQ8WZ04 291 aa17.24■□□□□ 0.35
COL9A3-202ENST00000452372 COX4I2Q96KJ9 171 aa17.24■□□□□ 0.35
COL9A3-202ENST00000452372 FOXN4Q96NZ1 517 aa17.24■□□□□ 0.35
COL9A3-202ENST00000452372 GSX2Q9BZM3 304 aa17.24■□□□□ 0.35
COL9A3-202ENST00000452372 RACGAP1Q9H0H5 632 aa17.24■□□□□ 0.35
COL9A3-202ENST00000452372 RPRD1BQ9NQG5 326 aaKnown RBP17.24■□□□□ 0.35
COL9A3-202ENST00000452372 CBLN4Q9NTU7 201 aa17.24■□□□□ 0.35
COL9A3-202ENST00000452372 FKBP7Q9Y680 259 aa17.24■□□□□ 0.35
COL9A3-202ENST00000452372 LY6G6DO95868 133 aa17.23■□□□□ 0.35
COL9A3-202ENST00000452372 OSMP13725 252 aa17.23■□□□□ 0.35
COL9A3-202ENST00000452372 DAG1Q14118 895 aa17.23■□□□□ 0.35
COL9A3-202ENST00000452372 C11orf71Q6IPW1 123 aa17.23■□□□□ 0.35
COL9A3-202ENST00000452372 FAHD1Q6P587 224 aa17.23■□□□□ 0.35
COL9A3-202ENST00000452372 HIPK1Q86Z02 1210 aa17.23■□□□□ 0.35
COL9A3-202ENST00000452372 ALDH16A1Q8IZ83 802 aa17.23■□□□□ 0.35
COL9A3-202ENST00000452372 CPEB3Q8NE35 698 aaKnown RBP17.23■□□□□ 0.35
COL9A3-202ENST00000452372 OR1J2Q8NGS2 313 aa17.23■□□□□ 0.35
COL9A3-202ENST00000452372 DNAJC9Q8WXX5 260 aa17.23■□□□□ 0.35
COL9A3-202ENST00000452372 Q96MF0 132 aa17.23■□□□□ 0.35
COL9A3-202ENST00000452372 OR2H1Q9GZK4 316 aa17.23■□□□□ 0.35
COL9A3-202ENST00000452372 ZNF442Q9H7R0 627 aa17.23■□□□□ 0.35
COL9A3-202ENST00000452372 KLHL21Q9UJP4 597 aa17.23■□□□□ 0.35
COL9A3-202ENST00000452372 SPEF1Q9Y4P9 236 aa17.23■□□□□ 0.35
COL9A3-202ENST00000452372 ANK3Q12955 4377 aaKnown RBP17.22■□□□□ 0.35
COL9A3-202ENST00000452372 VSTM5A8MXK1 200 aa17.22■□□□□ 0.35
COL9A3-202ENST00000452372 G3V2T6 193 aa17.22■□□□□ 0.35
COL9A3-202ENST00000452372 MPZL1O95297 269 aa17.22■□□□□ 0.35
COL9A3-202ENST00000452372 SNAP29O95721 258 aa17.22■□□□□ 0.35
COL9A3-202ENST00000452372 APEX1P27695 318 aaKnown RBP17.22■□□□□ 0.35
COL9A3-202ENST00000452372 THBS4P35443 961 aa17.22■□□□□ 0.35
COL9A3-202ENST00000452372 PTH2RP49190 550 aa17.22■□□□□ 0.35
COL9A3-202ENST00000452372 CENPAP49450 140 aa17.22■□□□□ 0.35
COL9A3-202ENST00000452372 GALK2Q01415 458 aa17.22■□□□□ 0.35
COL9A3-202ENST00000452372 SNTB2Q13425 540 aaKnown RBP17.22■□□□□ 0.35
COL9A3-202ENST00000452372 ADIPOQQ15848 244 aa17.22■□□□□ 0.35
COL9A3-202ENST00000452372 KRT80Q6KB66 452 aa17.22■□□□□ 0.35
COL9A3-202ENST00000452372 CLEC9AQ6UXN8 241 aa17.22■□□□□ 0.35
COL9A3-202ENST00000452372 AMIGO2Q86SJ2 522 aa17.22■□□□□ 0.35
COL9A3-202ENST00000452372 C10orf67Q8IYJ2 551 aa17.22■□□□□ 0.35
COL9A3-202ENST00000452372 CYB561A3Q8NBI2 242 aa17.22■□□□□ 0.35
COL9A3-202ENST00000452372 SLC37A3Q8NCC5 494 aa17.22■□□□□ 0.35
COL9A3-202ENST00000452372 PYDC1Q8WXC3 89 aa17.22■□□□□ 0.35
COL9A3-202ENST00000452372 C11orf40Q8WZ69 217 aa17.22■□□□□ 0.35
COL9A3-202ENST00000452372 PERPQ96FX8 193 aa17.22■□□□□ 0.35
COL9A3-202ENST00000452372 RAB3IPQ96QF0 476 aaPredicted RBP17.22■□□□□ 0.35
COL9A3-202ENST00000452372 WNT5BQ9H1J7 359 aa17.22■□□□□ 0.35
COL9A3-202ENST00000452372 ARFGEF3Q5TH69 2177 aa17.22■□□□□ 0.35
COL9A3-202ENST00000452372 H7C1Q1 480 aa17.21■□□□□ 0.35
COL9A3-202ENST00000452372 OR4A8P0C604 315 aa17.21■□□□□ 0.35
COL9A3-202ENST00000452372 GAAP10253 952 aa17.21■□□□□ 0.35
COL9A3-202ENST00000452372 CCL2P13500 99 aa17.21■□□□□ 0.35
COL9A3-202ENST00000452372 STOMP27105 288 aa17.21■□□□□ 0.35
COL9A3-202ENST00000452372 POU1F1P28069 291 aa17.21■□□□□ 0.35
COL9A3-202ENST00000452372 APLNRP35414 380 aa17.21■□□□□ 0.35
COL9A3-202ENST00000452372 GLRXP35754 106 aa17.21■□□□□ 0.35
COL9A3-202ENST00000452372 SERPINF1P36955 418 aa17.21■□□□□ 0.35
COL9A3-202ENST00000452372 CDKN1AP38936 164 aa17.21■□□□□ 0.35
COL9A3-202ENST00000452372 DAPP51397 102 aa17.21■□□□□ 0.35
COL9A3-202ENST00000452372 GLO1Q04760 184 aa17.21■□□□□ 0.35
COL9A3-202ENST00000452372 DBPQ10586 325 aaPredicted RBP17.21■□□□□ 0.35
COL9A3-202ENST00000452372 SWI5Q1ZZU3 235 aa17.21■□□□□ 0.35
COL9A3-202ENST00000452372 TBC1D28Q2M2D7 210 aa17.21■□□□□ 0.35
COL9A3-202ENST00000452372 MST1LQ2TV78 715 aa17.21■□□□□ 0.35
COL9A3-202ENST00000452372 SLC27A4Q6P1M0 643 aa17.21■□□□□ 0.35
COL9A3-202ENST00000452372 VHLLQ6RSH7 139 aa17.21■□□□□ 0.35
COL9A3-202ENST00000452372 ZDHHC13Q8IUH4 622 aa17.21■□□□□ 0.35
COL9A3-202ENST00000452372 AKR7LQ8NHP1 331 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms