RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 NCR1O76036 304 aa16.57■□□□□ 0.24
USP40-207ENST00000450940 ITGA2P17301 1181 aa16.57■□□□□ 0.24
USP40-207ENST00000450940 IL2RGP31785 369 aa16.57■□□□□ 0.24
USP40-207ENST00000450940 GDI2P50395 445 aaKnown RBP16.57■□□□□ 0.24
USP40-207ENST00000450940 TMEM33P57088 247 aa16.57■□□□□ 0.24
USP40-207ENST00000450940 LCN6P62502 163 aa16.57■□□□□ 0.24
USP40-207ENST00000450940 GNGT1P63211 74 aa16.57■□□□□ 0.24
USP40-207ENST00000450940 PCGF3Q3KNV8 242 aa16.57■□□□□ 0.24
USP40-207ENST00000450940 SPATS1Q496A3 300 aa16.57■□□□□ 0.24
USP40-207ENST00000450940 FGD3Q5JSP0 725 aa16.57■□□□□ 0.24
USP40-207ENST00000450940 GPR139Q6DWJ6 353 aa16.57■□□□□ 0.24
USP40-207ENST00000450940 UGT2A3Q6UWM9 527 aa16.57■□□□□ 0.24
USP40-207ENST00000450940 UNQ6126/PRO20091Q6UXV3 157 aa16.57■□□□□ 0.24
USP40-207ENST00000450940 YIPF5Q969M3 257 aa16.57■□□□□ 0.24
USP40-207ENST00000450940 MARS2Q96GW9 593 aaKnown RBP16.57■□□□□ 0.24
USP40-207ENST00000450940 ZNF570Q96NI8 536 aa16.57■□□□□ 0.24
USP40-207ENST00000450940 LRRC37BQ96QE4 947 aa16.57■□□□□ 0.24
USP40-207ENST00000450940 SHARPINQ9H0F6 387 aa16.57■□□□□ 0.24
USP40-207ENST00000450940 RACGAP1Q9H0H5 632 aa16.57■□□□□ 0.24
USP40-207ENST00000450940 ARL8BQ9NVJ2 186 aa16.57■□□□□ 0.24
USP40-207ENST00000450940 EIF3KQ9UBQ5 218 aaKnown RBP16.57■□□□□ 0.24
USP40-207ENST00000450940 A0A1W2PPL8 197 aa16.56■□□□□ 0.24
USP40-207ENST00000450940 C5orf49A4QMS7 147 aa16.56■□□□□ 0.24
USP40-207ENST00000450940 XKRYO14609 159 aa16.56■□□□□ 0.24
USP40-207ENST00000450940 RP2O75695 350 aa16.56■□□□□ 0.24
USP40-207ENST00000450940 DIRAS1O95057 198 aa16.56■□□□□ 0.24
USP40-207ENST00000450940 TXNDC12O95881 172 aa16.56■□□□□ 0.24
USP40-207ENST00000450940 TGFAP01135 160 aa16.56■□□□□ 0.24
USP40-207ENST00000450940 COX5BP10606 129 aa16.56■□□□□ 0.24
USP40-207ENST00000450940 CCNOP22674 350 aa16.56■□□□□ 0.24
USP40-207ENST00000450940 SDHAP31040 664 aa16.56■□□□□ 0.24
USP40-207ENST00000450940 THBS2P35442 1172 aa16.56■□□□□ 0.24
USP40-207ENST00000450940 MAGEB1P43366 347 aa16.56■□□□□ 0.24
USP40-207ENST00000450940 SMIM11AP58511 58 aa16.56■□□□□ 0.24
USP40-207ENST00000450940 TRIP10Q15642 601 aa16.56■□□□□ 0.24
USP40-207ENST00000450940 THSD4Q6ZMP0 1018 aa16.56■□□□□ 0.24
USP40-207ENST00000450940 RSRC1Q96IZ7 334 aaKnown RBP16.56■□□□□ 0.24
USP40-207ENST00000450940 SNX18Q96RF0 628 aa16.56■□□□□ 0.24
USP40-207ENST00000450940 CDRT15Q96T59 188 aa16.56■□□□□ 0.24
USP40-207ENST00000450940 GPA33Q99795 319 aa16.56■□□□□ 0.24
USP40-207ENST00000450940 VSX1Q9NZR4 365 aaPredicted RBP16.56■□□□□ 0.24
USP40-207ENST00000450940 TEX13CA0A0J9YWL9 993 aa16.55■□□□□ 0.24
USP40-207ENST00000450940 H3BSA7 217 aa16.55■□□□□ 0.24
USP40-207ENST00000450940 DCTN3O75935 186 aa16.55■□□□□ 0.24
USP40-207ENST00000450940 CTLA4P16410 223 aa16.55■□□□□ 0.24
USP40-207ENST00000450940 KRR1Q13601 381 aaKnown RBP16.55■□□□□ 0.24
USP40-207ENST00000450940 KRT72Q14CN4 511 aa16.55■□□□□ 0.24
USP40-207ENST00000450940 ZNF718Q3SXZ3 478 aa16.55■□□□□ 0.24
USP40-207ENST00000450940 FAM120AOSQ5T036 256 aa16.55■□□□□ 0.24
USP40-207ENST00000450940 MBNL2Q5VZF2 373 aaKnown RBP16.55■□□□□ 0.24
USP40-207ENST00000450940 ZNF774Q6NX45 483 aa16.55■□□□□ 0.24
USP40-207ENST00000450940 TMEM154Q6P9G4 183 aa16.55■□□□□ 0.24
USP40-207ENST00000450940 DPY19L2P2Q6ZN68 376 aa16.55■□□□□ 0.24
USP40-207ENST00000450940 CXXC5Q7LFL8 322 aaKnown RBP16.55■□□□□ 0.24
USP40-207ENST00000450940 SNX33Q8WV41 574 aa16.55■□□□□ 0.24
USP40-207ENST00000450940 KRCC1Q9NPI7 259 aaPredicted RBP16.55■□□□□ 0.24
USP40-207ENST00000450940 ZNF275Q9NSD4 429 aaPredicted RBP16.55■□□□□ 0.24
USP40-207ENST00000450940 AURKCQ9UQB9 309 aa16.55■□□□□ 0.24
USP40-207ENST00000450940 UNC119BA6NIH7 251 aa16.54■□□□□ 0.24
USP40-207ENST00000450940 ARPC2O15144 300 aa16.54■□□□□ 0.24
USP40-207ENST00000450940 MSX2P35548 267 aaPredicted RBP16.54■□□□□ 0.24
USP40-207ENST00000450940 GPR6P46095 362 aaPredicted RBP16.54■□□□□ 0.24
USP40-207ENST00000450940 CDH15P55291 814 aa16.54■□□□□ 0.24
USP40-207ENST00000450940 ALKBH6Q3KRA9 238 aa16.54■□□□□ 0.24
USP40-207ENST00000450940 TMEM255AQ5JRV8 349 aa16.54■□□□□ 0.24
USP40-207ENST00000450940 ZER1Q7Z7L7 766 aa16.54■□□□□ 0.24
USP40-207ENST00000450940 ADCK1Q86TW2 530 aa16.54■□□□□ 0.24
USP40-207ENST00000450940 LINC01356Q8N9X3 169 aa16.54■□□□□ 0.24
USP40-207ENST00000450940 OR52J3Q8NH60 311 aa16.54■□□□□ 0.24
USP40-207ENST00000450940 KLF14Q8TD94 323 aaPredicted RBP16.54■□□□□ 0.24
USP40-207ENST00000450940 RASD2Q96D21 266 aa16.54■□□□□ 0.24
USP40-207ENST00000450940 C4orf45Q96LM5 186 aa16.54■□□□□ 0.24
USP40-207ENST00000450940 NSMCE2Q96MF7 247 aa16.54■□□□□ 0.24
USP40-207ENST00000450940 EMC7Q9NPA0 242 aa16.54■□□□□ 0.24
USP40-207ENST00000450940 NDE1Q9NXR1 346 aa16.54■□□□□ 0.24
USP40-207ENST00000450940 KLHL21Q9UJP4 597 aa16.54■□□□□ 0.24
USP40-207ENST00000450940 NDRG4Q9ULP0 352 aaKnown RBP16.54■□□□□ 0.24
USP40-207ENST00000450940 KHDRBS3O75525 346 aaKnown RBP16.53■□□□□ 0.24
USP40-207ENST00000450940 GADD45GO95257 159 aa16.53■□□□□ 0.24
USP40-207ENST00000450940 NGFP01138 241 aa16.53■□□□□ 0.24
USP40-207ENST00000450940 MT-ND5P03915 603 aa16.53■□□□□ 0.24
USP40-207ENST00000450940 ADH4P08319 380 aa16.53■□□□□ 0.24
USP40-207ENST00000450940 MPV17P39210 176 aa16.53■□□□□ 0.24
USP40-207ENST00000450940 CRYBB2P43320 205 aa16.53■□□□□ 0.24
USP40-207ENST00000450940 MMP15P51511 669 aa16.53■□□□□ 0.24
USP40-207ENST00000450940 LSM6P62312 80 aaKnown RBP16.53■□□□□ 0.24
USP40-207ENST00000450940 CCL8P80075 99 aa16.53■□□□□ 0.24
USP40-207ENST00000450940 SCRN3Q0VDG4 424 aa16.53■□□□□ 0.24
USP40-207ENST00000450940 KCNMB1Q16558 191 aa16.53■□□□□ 0.24
USP40-207ENST00000450940 SMARCD3Q6STE5 483 aa16.53■□□□□ 0.24
USP40-207ENST00000450940 C16orf89Q6UX73 402 aa16.53■□□□□ 0.24
USP40-207ENST00000450940 RFPL4BQ6ZWI9 263 aa16.53■□□□□ 0.24
USP40-207ENST00000450940 ICA1LQ8NDH6 482 aa16.53■□□□□ 0.24
USP40-207ENST00000450940 SPATA3Q8NHX4 192 aa16.53■□□□□ 0.24
USP40-207ENST00000450940 SLC25A40Q8TBP6 338 aa16.53■□□□□ 0.24
USP40-207ENST00000450940 OR2J1Q9GZK6 312 aa16.53■□□□□ 0.24
USP40-207ENST00000450940 SYT4Q9H2B2 425 aa16.53■□□□□ 0.24
USP40-207ENST00000450940 ELOVL3Q9HB03 270 aa16.53■□□□□ 0.24
USP40-207ENST00000450940 IL1RAPQ9NPH3 570 aa16.53■□□□□ 0.24
USP40-207ENST00000450940 IER3IP1Q9Y5U9 82 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms