RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 BEX2Q9BXY8 128 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 BEX1Q9HBH7 125 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 ACER3Q9NUN7 267 aa7.81□□□□□ -1.16
PTPN3-204ENST00000446349 SERPINA7P05543 415 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 HNRNPFP52597 415 aaKnown RBP7.8□□□□□ -1.16
PTPN3-204ENST00000446349 ACSM1Q08AH1 577 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 DOC2BQ14184 412 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 SHBQ15464 509 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 ZDHHC23Q8IYP9 409 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 FAM185AQ8N0U4 392 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 OR6K3Q8NGY3 331 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 CDX2Q99626 313 aaPredicted RBP7.8□□□□□ -1.16
PTPN3-204ENST00000446349 NDFIP1Q9BT67 221 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 PATZ1Q9HBE1 687 aaKnown RBP7.8□□□□□ -1.16
PTPN3-204ENST00000446349 A0A1W2PR48 441 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 M0R135 149 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 MITFO75030 526 aaPredicted RBP7.8□□□□□ -1.16
PTPN3-204ENST00000446349 SYT14P1Q58G82 188 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 SFRP4Q6FHJ7 346 aaPredicted RBP7.8□□□□□ -1.16
PTPN3-204ENST00000446349 WFDC8Q8IUA0 241 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 TMEM185AQ8NFB2 350 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 ZNF799Q96GE5 643 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 ZC3HAV1LQ96H79 300 aaKnown RBP7.8□□□□□ -1.16
PTPN3-204ENST00000446349 BIN3Q9NQY0 253 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 AMDHD2Q9Y303 409 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 SPAG17Q6Q759 2223 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 K7EPK0 472 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 M0R1B8 84 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 GNB2P62879 340 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 Q6ZRG5 221 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 H2BFWTQ7Z2G1 175 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 EGFL6Q8IUX8 553 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 FAM71E2Q8N5Q1 922 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 SLC16A11Q8NCK7 471 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 WBP2Q969T9 261 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 COPS3Q9UNS2 423 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 UGT2A1Q9Y4X1 527 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 M0R082 166 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 ACTL6AO96019 429 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 GYPBP06028 91 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 GRPP07492 148 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 DTYMKP23919 212 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 GALNSP34059 522 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 LIPAP38571 399 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 RAB4BP61018 213 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 OR1C1Q15619 314 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 OR13C9Q8NGT0 318 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 LINC01599Q8WXQ3 324 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 UBQLN3Q9H347 655 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 SLC5A6Q9Y289 635 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 TMEM129A0AVI4 362 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 ZNF354AO60765 605 aaPredicted RBP7.8□□□□□ -1.16
PTPN3-204ENST00000446349 TBX19O60806 448 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 AKR7A3O95154 331 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 SOD1P00441 154 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 ETV5P41161 510 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 NCS1P62166 190 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 OR4F15Q8NGB8 312 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 QRSL1Q9H0R6 528 aaKnown RBP7.8□□□□□ -1.16
PTPN3-204ENST00000446349 SLC25A18Q9H1K4 315 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 NOX3Q9HBY0 568 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 MYO16Q9Y6X6 1858 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 IGHV1OR15-9A0A0B4J2B8 117 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 HPGDSO60760 199 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 GLRA1P23415 457 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 RNF165Q6ZSG1 346 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 Q6ZSR9 355 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 PP6455Q8WZ26 134 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 SEH1LQ96EE3 360 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 DIRC2Q96SL1 478 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 CMC2Q9NRP2 79 aa7.8□□□□□ -1.16
PTPN3-204ENST00000446349 ACOT8O14734 319 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 PPP2CBP62714 309 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 PPP2CAP67775 309 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 SPEM2Q0P670 501 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 FGGYQ96C11 551 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 ZNF419Q96HQ0 510 aaPredicted RBP7.79□□□□□ -1.16
PTPN3-204ENST00000446349 NMNAT3Q96T66 252 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 NLKQ9UBE8 527 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 GPR55Q9Y2T6 319 aaPredicted RBP7.79□□□□□ -1.16
PTPN3-204ENST00000446349 FAM183AA6NL82 134 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 CRMP1Q14194 572 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 SYS1Q8N2H4 156 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 OR1S2Q8NGQ3 325 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 TAAR6Q96RI8 345 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 SAV1Q9H4B6 383 aaPredicted RBP7.79□□□□□ -1.16
PTPN3-204ENST00000446349 PSORS1C1Q9UIG5 152 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 ACOD1A6NK06 481 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 NRASP01111 189 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 ATP1B1P05026 303 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 METTL15P1P0C7V9 234 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 PRKACAP17612 351 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 NXPH1P58417 271 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 TAS2R45P59539 299 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 TCEAL2Q9H3H9 227 aaPredicted RBP7.79□□□□□ -1.16
PTPN3-204ENST00000446349 SMAD9O15198 467 aaKnown RBP7.79□□□□□ -1.16
PTPN3-204ENST00000446349 LINC01565O15544 149 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 FZD6O60353 706 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 OR2J2O76002 312 aa7.79□□□□□ -1.16
PTPN3-204ENST00000446349 CSF3P09919 207 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms