RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 CHST11Q9NPF2 352 aa15.11■□□□□ 0.01
TCOF1-206ENST00000445265 TMEM235A6NFC5 223 aa15.11■□□□□ 0.01
TCOF1-206ENST00000445265 OR6C76A6NM76 312 aa15.11■□□□□ 0.01
TCOF1-206ENST00000445265 M6PRP20645 277 aa15.11■□□□□ 0.01
TCOF1-206ENST00000445265 SCAND1P57086 179 aa15.11■□□□□ 0.01
TCOF1-206ENST00000445265 ZNF141Q15928 474 aa15.11■□□□□ 0.01
TCOF1-206ENST00000445265 SFTPA1Q8IWL2 248 aa15.11■□□□□ 0.01
TCOF1-206ENST00000445265 C1orf123Q9NWV4 160 aa15.11■□□□□ 0.01
TCOF1-206ENST00000445265 CES1P1Q9UKY3 287 aa15.11■□□□□ 0.01
TCOF1-206ENST00000445265 MRPS2Q9Y399 296 aaKnown RBP15.11■□□□□ 0.01
TCOF1-206ENST00000445265 OGG1O15527 345 aa15.11■□□□□ 0.01
TCOF1-206ENST00000445265 WDPCPO95876 746 aa15.11■□□□□ 0.01
TCOF1-206ENST00000445265 IL32P24001 234 aa15.11■□□□□ 0.01
TCOF1-206ENST00000445265 TMEM81Q6P7N7 255 aa15.11■□□□□ 0.01
TCOF1-206ENST00000445265 TMEM91Q6ZNR0 172 aa15.11■□□□□ 0.01
TCOF1-206ENST00000445265 ST8SIA1Q92185 356 aa15.11■□□□□ 0.01
TCOF1-206ENST00000445265 OR8B4Q96RC9 309 aa15.11■□□□□ 0.01
TCOF1-206ENST00000445265 PIGMQ9H3S5 423 aa15.11■□□□□ 0.01
TCOF1-206ENST00000445265 PTRH2Q9Y3E5 179 aaKnown RBP15.11■□□□□ 0.01
TCOF1-206ENST00000445265 R4GMQ9 66 aa15.11■□□□□ 0.01
TCOF1-206ENST00000445265 A0A1W2PPC4 97 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 PRAMEF25A6NGN4 478 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 GLSO94925 669 aaPredicted RBP15.1■□□□□ 0.01
TCOF1-206ENST00000445265 HOXB9P17482 250 aaPredicted RBP15.1■□□□□ 0.01
TCOF1-206ENST00000445265 RPL35P42766 123 aaKnown RBP15.1■□□□□ 0.01
TCOF1-206ENST00000445265 CLDN17P56750 224 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 MRPL49Q13405 166 aaKnown RBP15.1■□□□□ 0.01
TCOF1-206ENST00000445265 OR1M1Q8NGA1 313 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 OTOSQ8NHW6 89 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 MARC2Q969Z3 335 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 K7EPK0 472 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 PRKNO60260 465 aaPredicted RBP15.1■□□□□ 0.01
TCOF1-206ENST00000445265 FCGR2AP12318 317 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 SNU13P55769 128 aaKnown RBP15.1■□□□□ 0.01
TCOF1-206ENST00000445265 FAM71E2Q8N5Q1 922 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 RNF170Q96K19 258 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 CMSS1Q9BQ75 279 aaKnown RBP15.1■□□□□ 0.01
TCOF1-206ENST00000445265 DLL4Q9NR61 685 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 FOXJ3Q9UPW0 622 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 CKAP5Q14008 2032 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 NTN1O95631 604 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 OR4E1P0C645 316 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 ATP1B3P54709 279 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 OR1D5P58170 312 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 KRBOX4Q5JUW0 171 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 UNQ6126/PRO20091Q6UXV3 157 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 ZNF695Q8IW36 515 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 SLC25A43Q8WUT9 341 aaPredicted RBP15.1■□□□□ 0.01
TCOF1-206ENST00000445265 OR11A1Q9GZK7 315 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 SLC25A32Q9H2D1 315 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 CCDC86Q9H6F5 360 aaKnown RBP15.1■□□□□ 0.01
TCOF1-206ENST00000445265 LDAHQ9H6V9 325 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 MOB1AQ9H8S9 216 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 ING1Q9UK53 422 aaPredicted RBP15.1■□□□□ 0.01
TCOF1-206ENST00000445265 D6RAR5 112 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 CBX7O95931 251 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 PMP2P02689 132 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 PRKACAP17612 351 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 GPR85P60893 370 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 PLA2G7Q13093 441 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 KCNAB1Q14722 419 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 FJX1Q86VR8 437 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 CMTM1Q8IZ96 169 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 KCNJ16Q9NPI9 418 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 WASF3Q9UPY6 502 aa15.1■□□□□ 0.01
TCOF1-206ENST00000445265 CXCL12P48061 93 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 UBE2MP61081 183 aaKnown RBP15.09■□□□□ 0.01
TCOF1-206ENST00000445265 GRB2P62993 217 aaKnown RBP15.09■□□□□ 0.01
TCOF1-206ENST00000445265 MFAP5Q13361 173 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 FGL2Q14314 439 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 PRSS53Q2L4Q9 553 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 ACOT7LQ6ZUV0 252 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 GRAMD2AQ8IUY3 354 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 CCDC74AQ96AQ1 378 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 SULT4A1Q9BR01 284 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 OTOFQ9HC10 1997 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 OR5H14A6NHG9 310 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 FTCDNL1E5RQL4 147 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 PYCARD-AS1I3L0S3 204 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 CTDSPLO15194 276 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 AKR7A3O95154 331 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 CT62P0C5K7 136 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 PEA15Q15121 130 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 AANATQ16613 207 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 LIX1LQ8IVB5 337 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 NINJ1Q92982 152 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 SLAMF6Q96DU3 332 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 SLC17A5Q9NRA2 495 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 LILRA5A6NI73 299 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 ALOX12BO75342 701 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 MED6O75586 246 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 FOLR3P41439 243 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 MTCP1P56278 107 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 PCBD1P61457 104 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 MFGE8Q08431 387 aaPredicted RBP15.09■□□□□ 0.01
TCOF1-206ENST00000445265 VWA2Q5GFL6 755 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 OR5V1Q9UGF6 321 aa15.09■□□□□ 0.01
TCOF1-206ENST00000445265 GSTZ1O43708 216 aaPredicted RBP15.09■□□□□ 0.01
TCOF1-206ENST00000445265 TBPP20226 339 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms