RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 REEP1Q9H902 201 aa18.77■□□□□ 0.6
TRAF4-205ENST00000444415 CCNB1IP1Q9NPC3 277 aa18.77■□□□□ 0.6
TRAF4-205ENST00000444415 IL20Q9NYY1 176 aa18.77■□□□□ 0.6
TRAF4-205ENST00000444415 CMAHPQ9Y471 501 aa18.77■□□□□ 0.6
TRAF4-205ENST00000444415 PMF1-BGLAPU3KQ54 211 aa18.77■□□□□ 0.6
TRAF4-205ENST00000444415 RNF223E7ERA6 249 aa18.77■□□□□ 0.59
TRAF4-205ENST00000444415 GAAP10253 952 aa18.77■□□□□ 0.59
TRAF4-205ENST00000444415 PPOXP50336 477 aa18.77■□□□□ 0.59
TRAF4-205ENST00000444415 EFNA4P52798 201 aa18.77■□□□□ 0.59
TRAF4-205ENST00000444415 HSF2Q03933 536 aa18.77■□□□□ 0.59
TRAF4-205ENST00000444415 KRTAP1-1Q07627 177 aa18.77■□□□□ 0.59
TRAF4-205ENST00000444415 TMEM255AQ5JRV8 349 aa18.77■□□□□ 0.59
TRAF4-205ENST00000444415 CLEC12AQ5QGZ9 265 aa18.77■□□□□ 0.59
TRAF4-205ENST00000444415 ZNF362Q5T0B9 420 aaPredicted RBP18.77■□□□□ 0.59
TRAF4-205ENST00000444415 ZNF774Q6NX45 483 aa18.77■□□□□ 0.59
TRAF4-205ENST00000444415 LEG1Q6P5S2 330 aa18.77■□□□□ 0.59
TRAF4-205ENST00000444415 RASSF6Q6ZTQ3 369 aa18.77■□□□□ 0.59
TRAF4-205ENST00000444415 OR6V1Q8N148 313 aa18.77■□□□□ 0.59
TRAF4-205ENST00000444415 LINC00471Q8N535 108 aa18.77■□□□□ 0.59
TRAF4-205ENST00000444415 OR4K13Q8NH42 304 aa18.77■□□□□ 0.59
TRAF4-205ENST00000444415 POP5Q969H6 163 aaKnown RBP18.77■□□□□ 0.59
TRAF4-205ENST00000444415 NIPSNAP1Q9BPW8 284 aa18.77■□□□□ 0.59
TRAF4-205ENST00000444415 DGCR6LQ9BY27 220 aa18.77■□□□□ 0.59
TRAF4-205ENST00000444415 IQCMA0A1B0GVH7 501 aa18.76■□□□□ 0.59
TRAF4-205ENST00000444415 OR6C68A6NDL8 312 aa18.76■□□□□ 0.59
TRAF4-205ENST00000444415 F12P00748 615 aaPredicted RBP18.76■□□□□ 0.59
TRAF4-205ENST00000444415 CST1P01037 141 aa18.76■□□□□ 0.59
TRAF4-205ENST00000444415 STOMP27105 288 aa18.76■□□□□ 0.59
TRAF4-205ENST00000444415 GALK2Q01415 458 aa18.76■□□□□ 0.59
TRAF4-205ENST00000444415 PLP2Q04941 152 aa18.76■□□□□ 0.59
TRAF4-205ENST00000444415 TBC1D28Q2M2D7 210 aa18.76■□□□□ 0.59
TRAF4-205ENST00000444415 BIVMQ86UB2 503 aa18.76■□□□□ 0.59
TRAF4-205ENST00000444415 SDR9C7Q8NEX9 313 aa18.76■□□□□ 0.59
TRAF4-205ENST00000444415 SNX18Q96RF0 628 aa18.76■□□□□ 0.59
TRAF4-205ENST00000444415 SYT3Q9BQG1 590 aa18.76■□□□□ 0.59
TRAF4-205ENST00000444415 KCNN2Q9H2S1 579 aa18.76■□□□□ 0.59
TRAF4-205ENST00000444415 FN3KQ9H479 309 aa18.76■□□□□ 0.59
TRAF4-205ENST00000444415 RERGLQ9H628 205 aa18.76■□□□□ 0.59
TRAF4-205ENST00000444415 CUBNO60494 3623 aa18.75■□□□□ 0.59
TRAF4-205ENST00000444415 KHDRBS3O75525 346 aaKnown RBP18.75■□□□□ 0.59
TRAF4-205ENST00000444415 SLC35F1Q5T1Q4 408 aa18.75■□□□□ 0.59
TRAF4-205ENST00000444415 Q71RC1 249 aaPredicted RBP18.75■□□□□ 0.59
TRAF4-205ENST00000444415 SYT9Q86SS6 491 aa18.75■□□□□ 0.59
TRAF4-205ENST00000444415 SPATA24Q86W54 205 aa18.75■□□□□ 0.59
TRAF4-205ENST00000444415 GLB1L2Q8IW92 636 aa18.75■□□□□ 0.59
TRAF4-205ENST00000444415 PAPD5Q8NDF8 572 aaKnown RBP18.75■□□□□ 0.59
TRAF4-205ENST00000444415 NPEPL1Q8NDH3 523 aa18.75■□□□□ 0.59
TRAF4-205ENST00000444415 OR10G2Q8NGC3 310 aa18.75■□□□□ 0.59
TRAF4-205ENST00000444415 C11orf40Q8WZ69 217 aa18.75■□□□□ 0.59
TRAF4-205ENST00000444415 CDH20Q9HBT6 801 aa18.75■□□□□ 0.59
TRAF4-205ENST00000444415 B9D1Q9UPM9 204 aa18.75■□□□□ 0.59
TRAF4-205ENST00000444415 TIMM10BQ9Y5J6 103 aa18.75■□□□□ 0.59
TRAF4-205ENST00000444415 SOX14O95416 240 aa18.74■□□□□ 0.59
TRAF4-205ENST00000444415 LY6G6DO95868 133 aa18.74■□□□□ 0.59
TRAF4-205ENST00000444415 CLPTM1O96005 669 aa18.74■□□□□ 0.59
TRAF4-205ENST00000444415 PTHP01270 115 aa18.74■□□□□ 0.59
TRAF4-205ENST00000444415 BMP4P12644 408 aa18.74■□□□□ 0.59
TRAF4-205ENST00000444415 PCSK6P29122 969 aa18.74■□□□□ 0.59
TRAF4-205ENST00000444415 APLNRP35414 380 aa18.74■□□□□ 0.59
TRAF4-205ENST00000444415 EVX1P49640 407 aa18.74■□□□□ 0.59
TRAF4-205ENST00000444415 UCP2P55851 309 aa18.74■□□□□ 0.59
TRAF4-205ENST00000444415 MEP1BQ16820 701 aa18.74■□□□□ 0.59
TRAF4-205ENST00000444415 ZBTB46Q86UZ6 589 aa18.74■□□□□ 0.59
TRAF4-205ENST00000444415 HS3ST5Q8IZT8 346 aa18.74■□□□□ 0.59
TRAF4-205ENST00000444415 OR4Q3Q8NH05 313 aa18.74■□□□□ 0.59
TRAF4-205ENST00000444415 ZNRF4Q8WWF5 429 aa18.74■□□□□ 0.59
TRAF4-205ENST00000444415 VRK1Q99986 396 aaPredicted RBP18.74■□□□□ 0.59
TRAF4-205ENST00000444415 REG4Q9BYZ8 158 aa18.74■□□□□ 0.59
TRAF4-205ENST00000444415 SPEF1Q9Y4P9 236 aa18.74■□□□□ 0.59
TRAF4-205ENST00000444415 SONP18583 2426 aaKnown RBP18.73■□□□□ 0.59
TRAF4-205ENST00000444415 NAV3Q8IVL0 2385 aa18.73■□□□□ 0.59
TRAF4-205ENST00000444415 C5orf49A4QMS7 147 aa18.73■□□□□ 0.59
TRAF4-205ENST00000444415 ICMTO60725 284 aa18.73■□□□□ 0.59
TRAF4-205ENST00000444415 FKBP6O75344 327 aa18.73■□□□□ 0.59
TRAF4-205ENST00000444415 STAMBPO95630 424 aa18.73■□□□□ 0.59
TRAF4-205ENST00000444415 MAD2L1BPQ15013 274 aaPredicted RBP18.73■□□□□ 0.59
TRAF4-205ENST00000444415 KCNMB1Q16558 191 aa18.73■□□□□ 0.59
TRAF4-205ENST00000444415 RFPL4BQ6ZWI9 263 aa18.73■□□□□ 0.59
TRAF4-205ENST00000444415 OR52E2Q8NGJ4 325 aa18.73■□□□□ 0.59
TRAF4-205ENST00000444415 FEVQ99581 238 aa18.73■□□□□ 0.59
TRAF4-205ENST00000444415 RACGAP1Q9H0H5 632 aa18.73■□□□□ 0.59
TRAF4-205ENST00000444415 SRA1Q9HD15 236 aaKnown RBP18.73■□□□□ 0.59
TRAF4-205ENST00000444415 RPRD1BQ9NQG5 326 aaKnown RBP18.73■□□□□ 0.59
TRAF4-205ENST00000444415 ARMC1Q9NVT9 282 aa18.73■□□□□ 0.59
TRAF4-205ENST00000444415 IGLV3-9A0A075B6K5 115 aa18.72■□□□□ 0.59
TRAF4-205ENST00000444415 C12orf71A8MTZ7 269 aa18.72■□□□□ 0.59
TRAF4-205ENST00000444415 IDH3BO43837 385 aa18.72■□□□□ 0.59
TRAF4-205ENST00000444415 TFP02787 698 aa18.72■□□□□ 0.59
TRAF4-205ENST00000444415 ADRA2AP08913 450 aa18.72■□□□□ 0.59
TRAF4-205ENST00000444415 ZNF250P15622 560 aa18.72■□□□□ 0.59
TRAF4-205ENST00000444415 CCNOP22674 350 aa18.72■□□□□ 0.59
TRAF4-205ENST00000444415 ALDH3B1P43353 468 aa18.72■□□□□ 0.59
TRAF4-205ENST00000444415 PCBD1P61457 104 aa18.72■□□□□ 0.59
TRAF4-205ENST00000444415 RPS23P62266 143 aaKnown RBP18.72■□□□□ 0.59
TRAF4-205ENST00000444415 LSM6P62312 80 aaKnown RBP18.72■□□□□ 0.59
TRAF4-205ENST00000444415 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.72■□□□□ 0.59
TRAF4-205ENST00000444415 RGS7BPQ6MZT1 257 aaPredicted RBP18.72■□□□□ 0.59
TRAF4-205ENST00000444415 RPL13AP3Q6NVV1 102 aa18.72■□□□□ 0.59
TRAF4-205ENST00000444415 CD300LDQ6UXZ3 194 aa18.72■□□□□ 0.59
TRAF4-205ENST00000444415 VASH1Q7L8A9 365 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms