RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 FOXC1Q12948 553 aa12.95□□□□□ -0.34
LINC00299-202ENST00000442956 SLC10A1Q14973 349 aa12.95□□□□□ -0.34
LINC00299-202ENST00000442956 PHYHD1Q5SRE7 291 aa12.95□□□□□ -0.34
LINC00299-202ENST00000442956 IGFL2Q6UWQ7 119 aa12.95□□□□□ -0.34
LINC00299-202ENST00000442956 PRSS35Q8N3Z0 413 aa12.95□□□□□ -0.34
LINC00299-202ENST00000442956 FAM109AQ8N4B1 249 aa12.95□□□□□ -0.34
LINC00299-202ENST00000442956 TEX19Q8NA77 164 aa12.95□□□□□ -0.34
LINC00299-202ENST00000442956 C4orf45Q96LM5 186 aa12.95□□□□□ -0.34
LINC00299-202ENST00000442956 DCBLD2Q96PD2 775 aa12.95□□□□□ -0.34
LINC00299-202ENST00000442956 POLR1DQ9Y2S0 133 aa12.95□□□□□ -0.34
LINC00299-202ENST00000442956 KCNMB2Q9Y691 235 aa12.95□□□□□ -0.34
LINC00299-202ENST00000442956 PRRC2CQ9Y520 2896 aaKnown RBP12.95□□□□□ -0.34
LINC00299-202ENST00000442956 ACOT7O00154 380 aa12.95□□□□□ -0.34
LINC00299-202ENST00000442956 KLK10O43240 276 aa12.95□□□□□ -0.34
LINC00299-202ENST00000442956 ARL6IP5O75915 188 aa12.95□□□□□ -0.34
LINC00299-202ENST00000442956 ZNF708P17019 499 aa12.95□□□□□ -0.34
LINC00299-202ENST00000442956 SPINK2P20155 84 aa12.95□□□□□ -0.34
LINC00299-202ENST00000442956 RNFT1Q5M7Z0 435 aa12.95□□□□□ -0.34
LINC00299-202ENST00000442956 FDX2Q6P4F2 183 aa12.95□□□□□ -0.34
LINC00299-202ENST00000442956 FCRLAQ7L513 359 aa12.95□□□□□ -0.34
LINC00299-202ENST00000442956 NR2C2APQ86WQ0 139 aa12.95□□□□□ -0.34
LINC00299-202ENST00000442956 ABTB1Q969K4 478 aaPredicted RBP12.95□□□□□ -0.34
LINC00299-202ENST00000442956 PNPLA2Q96AD5 504 aa12.95□□□□□ -0.34
LINC00299-202ENST00000442956 CEP19Q96LK0 163 aa12.95□□□□□ -0.34
LINC00299-202ENST00000442956 SMAD5Q99717 465 aaKnown RBP12.95□□□□□ -0.34
LINC00299-202ENST00000442956 PALMDQ9NP74 551 aa12.95□□□□□ -0.34
LINC00299-202ENST00000442956 ACKR4Q9NPB9 350 aa12.95□□□□□ -0.34
LINC00299-202ENST00000442956 UGT2A1Q9Y4X1 527 aa12.95□□□□□ -0.34
LINC00299-202ENST00000442956 LAMA5O15230 3695 aa12.95□□□□□ -0.34
LINC00299-202ENST00000442956 FRYQ5TBA9 3013 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 PNPP00491 289 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 UCHL1P09936 223 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 KIR3DL2P43630 455 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 RASGEF1BQ0VAM2 473 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 WDR38Q5JTN6 314 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 UNQ9370/PRO34162Q6UXP9 181 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 MEIOBQ8N635 442 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 ZNF676Q8N7Q3 588 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 ABHD3Q8WU67 409 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 RNF133Q8WVZ7 376 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 DEFB127Q9H1M4 99 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 POLE4Q9NR33 117 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 CENPMQ9NSP4 180 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 FOXD3Q9UJU5 478 aaPredicted RBP12.94□□□□□ -0.34
LINC00299-202ENST00000442956 RCE1Q9Y256 329 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 LHFPL6Q9Y693 200 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 ACOD1A6NK06 481 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 TMEM212A6NML5 194 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 ZNF879B4DU55 563 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 TAF4O00268 1085 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 CYTIPO60759 359 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 TNFSF8P32971 234 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 NTF4P34130 210 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 MAGEB1P43366 347 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 ODF4Q2M2E3 257 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 SPANXN2Q5MJ10 180 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 C10orf128Q5T292 105 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 CCDC190Q86UF4 302 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 TPRA1Q86W33 373 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 LAX1Q8IWV1 398 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 C20orf196Q8IYI0 205 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 INTS12Q96CB8 462 aaKnown RBP12.94□□□□□ -0.34
LINC00299-202ENST00000442956 COMMD4Q9H0A8 199 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 C1orf198Q9H425 327 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 NOX4Q9NPH5 578 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 FBXL3Q9UKT7 428 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 GTF2A1LQ9UNN4 478 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 CMAHPQ9Y471 501 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 LIPGQ9Y5X9 500 aa12.94□□□□□ -0.34
LINC00299-202ENST00000442956 TRAV1-2A0A0B4J238 106 aa12.93□□□□□ -0.34
LINC00299-202ENST00000442956 ZNF254O75437 659 aa12.93□□□□□ -0.34
LINC00299-202ENST00000442956 CEACAM4O75871 244 aa12.93□□□□□ -0.34
LINC00299-202ENST00000442956 ZNF133P52736 654 aaPredicted RBP12.93□□□□□ -0.34
LINC00299-202ENST00000442956 OR10A3P58181 314 aa12.93□□□□□ -0.34
LINC00299-202ENST00000442956 ZNF45Q02386 682 aa12.93□□□□□ -0.34
LINC00299-202ENST00000442956 MFGE8Q08431 387 aaPredicted RBP12.93□□□□□ -0.34
LINC00299-202ENST00000442956 BCL2A1Q16548 175 aa12.93□□□□□ -0.34
LINC00299-202ENST00000442956 KCNMB1Q16558 191 aa12.93□□□□□ -0.34
LINC00299-202ENST00000442956 HSD17B12Q53GQ0 312 aa12.93□□□□□ -0.34
LINC00299-202ENST00000442956 DEGS2Q6QHC5 323 aa12.93□□□□□ -0.34
LINC00299-202ENST00000442956 RDH10Q8IZV5 341 aa12.93□□□□□ -0.34
LINC00299-202ENST00000442956 PHYHIPQ92561 330 aa12.93□□□□□ -0.34
LINC00299-202ENST00000442956 SLAMF6Q96DU3 332 aa12.93□□□□□ -0.34
LINC00299-202ENST00000442956 ATF6BQ99941 703 aa12.93□□□□□ -0.34
LINC00299-202ENST00000442956 ULBP2Q9BZM5 246 aa12.93□□□□□ -0.34
LINC00299-202ENST00000442956 ABCB9Q9NP78 766 aa12.93□□□□□ -0.34
LINC00299-202ENST00000442956 ASH2LQ9UBL3 628 aa12.93□□□□□ -0.34
LINC00299-202ENST00000442956 SLC22A13Q9Y226 551 aa12.93□□□□□ -0.34
LINC00299-202ENST00000442956 URB1O60287 2271 aaKnown RBP12.93□□□□□ -0.34
LINC00299-202ENST00000442956 PIN1P1O15428 100 aa12.93□□□□□ -0.34
LINC00299-202ENST00000442956 DHHO43323 396 aa12.93□□□□□ -0.34
LINC00299-202ENST00000442956 H2BFMP0C1H6 154 aa12.93□□□□□ -0.34
LINC00299-202ENST00000442956 ETV6P41212 452 aa12.93□□□□□ -0.34
LINC00299-202ENST00000442956 GUCA1AP43080 201 aaPredicted RBP12.93□□□□□ -0.34
LINC00299-202ENST00000442956 CCR9P51686 369 aa12.93□□□□□ -0.34
LINC00299-202ENST00000442956 PPP5CP53041 499 aa12.93□□□□□ -0.34
LINC00299-202ENST00000442956 PMP22Q01453 160 aa12.93□□□□□ -0.34
LINC00299-202ENST00000442956 SGCAQ16586 387 aa12.93□□□□□ -0.34
LINC00299-202ENST00000442956 DDI2Q5TDH0 399 aa12.93□□□□□ -0.34
LINC00299-202ENST00000442956 CFAP77Q6ZQR2 320 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms