RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 NRARPQ7Z6K4 114 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 GPSM1Q86YR5 675 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 ATPAF2Q8N5M1 289 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 LRRC52Q8N7C0 313 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 OR51F2Q8NH61 342 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 C8orf44Q96CB5 159 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 QTRT1Q9BXR0 403 aaKnown RBP9.42□□□□□ -0.9
SYNE2-206ENST00000441438 MS4A8Q9BY19 250 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 NXF2Q9GZY0 626 aaKnown RBP9.42□□□□□ -0.9
SYNE2-206ENST00000441438 ISYNA1Q9NPH2 558 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 TMEM216Q9P0N5 145 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 SLC9A2Q9UBY0 812 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 C20orf202A1L168 122 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 C17orf105B2RV13 164 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 K7ERI5 159 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 ZNF30P17039 623 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 PAX9P55771 341 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 ID2Q02363 134 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 ARHGAP11BQ3KRB8 267 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 KIAA0895LQ68EN5 471 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 ADAMTS17Q8TE56 1095 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 CNBD2Q96M20 576 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 IL4I1Q96RQ9 567 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 DOK1Q99704 481 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 DCSTAMPQ9H295 470 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 MRPS18AQ9NVS2 196 aaKnown RBP9.42□□□□□ -0.9
SYNE2-206ENST00000441438 M0R143 59 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 SSTR1P30872 391 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 NR0B1P51843 470 aaKnown RBP9.42□□□□□ -0.9
SYNE2-206ENST00000441438 TCTEX1D4Q5JR98 221 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 ANKRD22Q5VYY1 191 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 POC1AQ8NBT0 407 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 OR4M1Q8NGD0 313 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 TCTEX1D2Q8WW35 142 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 DCUN1D1Q96GG9 259 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 ZNF354BQ96LW1 612 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 Q96MT0 163 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 COPS8Q99627 209 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 URM1Q9BTM9 101 aaKnown RBP9.42□□□□□ -0.9
SYNE2-206ENST00000441438 C1QTNF1Q9BXJ1 281 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 SYT4Q9H2B2 425 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 SCP2D1Q9UJQ7 156 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 SLC25A13Q9UJS0 675 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 POMPQ9Y244 141 aa9.42□□□□□ -0.9
SYNE2-206ENST00000441438 MKI67P46013 3256 aaKnown RBP9.41□□□□□ -0.9
SYNE2-206ENST00000441438 CCDC182A6NF36 153 aa9.41□□□□□ -0.9
SYNE2-206ENST00000441438 EFCAB9A8MZ26 197 aa9.41□□□□□ -0.9
SYNE2-206ENST00000441438 CLIC1O00299 241 aa9.41□□□□□ -0.9
SYNE2-206ENST00000441438 TNFSF11O14788 317 aa9.41□□□□□ -0.9
SYNE2-206ENST00000441438 CASKO14936 926 aa9.41□□□□□ -0.9
SYNE2-206ENST00000441438 DUSP1P28562 367 aa9.41□□□□□ -0.9
SYNE2-206ENST00000441438 DAP3P51398 398 aaKnown RBP9.41□□□□□ -0.9
SYNE2-206ENST00000441438 COX15Q7KZN9 410 aa9.41□□□□□ -0.9
SYNE2-206ENST00000441438 PEX11GQ96HA9 241 aa9.41□□□□□ -0.9
SYNE2-206ENST00000441438 FEVQ99581 238 aa9.41□□□□□ -0.9
SYNE2-206ENST00000441438 MYO18AQ92614 2054 aaKnown RBP9.41□□□□□ -0.9
SYNE2-206ENST00000441438 A0A096LPI6 279 aa9.41□□□□□ -0.9
SYNE2-206ENST00000441438 TMEM50AO95807 157 aa9.41□□□□□ -0.9
SYNE2-206ENST00000441438 CCKARP32238 428 aa9.41□□□□□ -0.9
SYNE2-206ENST00000441438 AQP5P55064 265 aa9.41□□□□□ -0.9
SYNE2-206ENST00000441438 RPL15P61313 204 aaKnown RBP9.41□□□□□ -0.9
SYNE2-206ENST00000441438 GNG3P63215 75 aa9.41□□□□□ -0.9
SYNE2-206ENST00000441438 RFTN2Q52LD8 501 aaPredicted RBP9.41□□□□□ -0.9
SYNE2-206ENST00000441438 HENMT1Q5T8I9 393 aaKnown RBP9.41□□□□□ -0.9
SYNE2-206ENST00000441438 UBE3DQ7Z6J8 389 aa9.41□□□□□ -0.9
SYNE2-206ENST00000441438 TMEM173Q86WV6 379 aaPredicted RBP9.41□□□□□ -0.9
SYNE2-206ENST00000441438 ATP6V1C2Q8NEY4 427 aa9.41□□□□□ -0.9
SYNE2-206ENST00000441438 OR2Y1Q8NGV0 311 aa9.41□□□□□ -0.9
SYNE2-206ENST00000441438 OR4C6Q8NH72 309 aa9.41□□□□□ -0.9
SYNE2-206ENST00000441438 HPSE2Q8WWQ2 592 aa9.41□□□□□ -0.9
SYNE2-206ENST00000441438 TRMT61AQ96FX7 289 aaKnown RBP9.41□□□□□ -0.9
SYNE2-206ENST00000441438 ITCHQ96J02 903 aa9.41□□□□□ -0.9
SYNE2-206ENST00000441438 FCRL1Q96LA6 429 aa9.41□□□□□ -0.9
SYNE2-206ENST00000441438 MCEEQ96PE7 176 aa9.41□□□□□ -0.9
SYNE2-206ENST00000441438 C1orf50Q9BV19 199 aa9.41□□□□□ -0.9
SYNE2-206ENST00000441438 ADAM29Q9UKF5 820 aa9.41□□□□□ -0.9
SYNE2-206ENST00000441438 PSG8Q9UQ74 426 aa9.41□□□□□ -0.9
SYNE2-206ENST00000441438 CIB4A0PJX0 185 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 C1orf226A1L170 272 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 FTCDNL1E5RQL4 147 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 COPEO14579 308 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 IDSP22304 550 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 NTF4P34130 210 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 CTBSQ01459 385 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 EMX1Q04741 257 aaPredicted RBP9.4□□□□□ -0.9
SYNE2-206ENST00000441438 INCA1Q0VD86 236 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 RNPS1Q15287 305 aaKnown RBP9.4□□□□□ -0.9
SYNE2-206ENST00000441438 TEAD2Q15562 447 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 ISXQ2M1V0 245 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 PARP15Q460N3 678 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 FAM71F2Q6NXP2 309 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 PARGQ86W56 976 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 LRRC28Q86X40 367 aaPredicted RBP9.4□□□□□ -0.9
SYNE2-206ENST00000441438 GDPD1Q8N9F7 314 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 ZFAND1Q8TCF1 268 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 FAM3CQ92520 227 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 TMEM19Q96HH6 336 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 MBOAT4Q96T53 435 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 PBX4Q9BYU1 374 aa9.4□□□□□ -0.9
SYNE2-206ENST00000441438 JPT1Q9UK76 154 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms