RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 CDC20BQ86Y33 519 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 KLBQ86Z14 1044 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 CROCCP3Q8IVE0 287 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 TIGD4Q8IY51 512 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 GHDCQ8N2G8 530 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 KDM8Q8N371 416 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 FAM109AQ8N4B1 249 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 ZADH2Q8N4Q0 377 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 TEX19Q8NA77 164 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 SYT14Q8NB59 555 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 OR10H5Q8NGA6 315 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 OR9K2Q8NGE7 335 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 OR51L1Q8NGJ5 315 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 OR2V1Q8NHB1 315 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 OTOSQ8NHW6 89 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 DYNC2LI1Q8TCX1 351 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 ZFAND2BQ8WV99 257 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 SPRYD4Q8WW59 207 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 S100ZQ8WXG8 99 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 PHYHIPQ92561 330 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 THRSPQ92748 146 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 CPNE4Q96A23 557 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 SCMH1Q96GD3 660 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 C4orf36Q96KX1 117 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 KCTD7Q96MP8 289 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 CLUHP3Q96NS8 147 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 DACH2Q96NX9 599 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 TSSK2Q96PF2 358 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 TBX5Q99593 518 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 NPAS1Q99742 590 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 CHCHD6Q9BRQ6 235 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 DCUN1D5Q9BTE7 237 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 MED18Q9BUE0 208 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 MRPL13Q9BYD1 178 aaKnown RBP3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 MROQ9BYG7 248 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 TTTY12Q9BZ98 90 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 OR51E2Q9H255 320 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 RERGLQ9H628 205 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 ZNF552Q9H707 407 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 ZNF703Q9H7S9 590 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 ISG20L2Q9H9L3 353 aaKnown RBP3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 EXOSC4Q9NPD3 245 aaKnown RBP3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 B3GAT2Q9NPZ5 323 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 PARPBPQ9NWS1 579 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 CCDC59Q9P031 241 aaKnown RBP3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 EMC3Q9P0I2 261 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 KLHL13Q9P2N7 655 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 B3GAT1Q9P2W7 334 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 CRNNQ9UBG3 495 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 LAMP5Q9UJQ1 280 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 GNG8Q9UK08 70 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 MCTS1Q9ULC4 181 aaKnown RBP3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 RCE1Q9Y256 329 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 FREM2Q5SZK8 3169 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 DMXL2Q8TDJ6 3036 aa3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 PHF3Q92576 2039 aaKnown RBP3.53□□□□□ -1.84
HMGB1P37-201ENST00000439613 RP1L1Q8IWN7 2480 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 WDFY3Q8IZQ1 3526 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 NCOA6Q14686 2063 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 A0A075B6Q4 140 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 TRBV2A0A0J9YWF9 115 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 PINLYPA6NC86 204 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 ZNF503-AS2A6NEH8 195 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 TVP23AA6NH52 213 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 FAM166BA8MTA8 275 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 FAM171A2A8MVW0 826 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 ZNF879B4DU55 563 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 H7C1C5 153 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 DCTN6O00399 190 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 TNFSF11O14788 317 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 SMAD9O15198 467 aaKnown RBP3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 RRP8O43159 456 aaKnown RBP3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 KLK10O43240 276 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 PAX4O43316 350 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 CYTIPO60759 359 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 SLC43A1O75387 559 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 GATBO75879 557 aaKnown RBP3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 ARL6IP5O75915 188 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 IL1AP01583 271 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 TFP02787 698 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 QDPRP09417 244 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 SPARCP09486 303 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 PGA4P0DJD7 388 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 PGA3P0DJD8 388 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 FCGR2AP12318 317 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 CPN1P15169 458 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 CTLA4P16410 223 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 ZNF708P17019 499 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 NR4A1P22736 598 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 CFL1P23528 166 aaKnown RBP3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 PAX7P23759 505 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 LAP3P28838 519 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 DCTDP32321 178 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 S100A5P33763 92 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 CD79BP40259 229 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 EIF2S3P41091 472 aaKnown RBP3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 MAGEA5P43359 124 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 LHX2P50458 406 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 RORCP51449 518 aa3.52□□□□□ -1.85
HMGB1P37-201ENST00000439613 ZNF84P51523 738 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms