RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 CPT2P23786 658 aa10.09□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 KIR2DS4P43632 304 aa10.09□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 HOXC5Q00444 222 aa10.09□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 PSG7Q13046 419 aa10.09□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 DPY19L1Q2PZI1 675 aa10.09□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 PGS1Q32NB8 556 aa10.09□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 OR4F3Q6IEY1 312 aa10.09□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 SLC16A14Q7RTX9 510 aa10.09□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 ZNF440Q8IYI8 595 aa10.09□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 CLIP4Q8N3C7 705 aa10.09□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 NATD1Q8N6N6 113 aa10.09□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 OR4A15Q8NGL6 344 aa10.09□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 TMEM54Q969K7 222 aa10.09□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 POM121L2Q96KW2 1035 aa10.09□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 CITED2Q99967 270 aaPredicted RBP10.09□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 SLC19A3Q9BZV2 496 aa10.09□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 SIRPDQ9H106 197 aa10.09□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 FAM96BQ9Y3D0 163 aa10.09□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 DNAJC15Q9Y5T4 150 aa10.09□□□□□ -0.79
SMAD9-IT1-201ENST00000437983 IGKV1D-42A0A075B6H8 117 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 A0A087WUJ7 227 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 IGHV3-64DA0A0J9YX35 117 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 C5orf49A4QMS7 147 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 TMEM114B3SHH9 223 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 E9PQ18 207 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 AZIN1O14977 448 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 NPHS1O60500 1241 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 PEX11AO75192 247 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 PTHP01270 115 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 F13BP05160 661 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 NQO1P15559 274 aaKnown RBP10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 LORP23490 312 aaPredicted RBP10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 STOMP27105 288 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 EPHA3P29320 983 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 PPP1CBP62140 327 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 PRB3Q04118 309 aaPredicted RBP10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 PLP2Q04941 152 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 ZNF404Q494X3 552 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 SLC36A2Q495M3 483 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 ZMAT1Q5H9K5 638 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 PABPC1L2AQ5JQF8 200 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 FAM69AQ5T7M9 428 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 SERPINA11Q86U17 422 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 ANKRD46Q86W74 232 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 NDUFA11Q86Y39 141 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 LRRC18Q8N456 261 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 C19orf18Q8NEA5 215 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 ABHD4Q8TB40 342 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 TRNT1Q96Q11 434 aaKnown RBP10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 OR2V2Q96R30 315 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 CENPHQ9H3R5 247 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 MTHFD2LQ9H903 347 aaPredicted RBP10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 A4GALTQ9NPC4 353 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 GLTPQ9NZD2 209 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 EMCNQ9ULC0 261 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 CHST2Q9Y4C5 530 aa10.08□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 SHISA3A0PJX4 238 aa10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 TMEM233B4DJY2 109 aa10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 H3BQF6 201 aa10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 PHYHO14832 338 aa10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 FARS2O95363 451 aaKnown RBP10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 CPSF4O95639 269 aaKnown RBP10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 DBIP07108 87 aaKnown RBP10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 TNFSF4P23510 183 aa10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 PHBP35232 272 aa10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 BIDP55957 195 aa10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 ARF6P62330 175 aa10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 VSNL1P62760 191 aa10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 HOXA4Q00056 320 aaPredicted RBP10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 HSF2Q03933 536 aa10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 EGFEM1PQ0D2K5 195 aa10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 GNA13Q14344 377 aa10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 MAPK11Q15759 364 aa10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 IL23RQ5VWK5 629 aa10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 LRRC74BQ6ZQY2 392 aa10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 MEPCEQ7L2J0 689 aaKnown RBP10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 CALHM3Q86XJ0 350 aa10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 ADPRHL1Q8NDY3 354 aa10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 HIPK4Q8NE63 616 aa10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 RBMXL1Q96E39 390 aaKnown RBP10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 SLC41A3Q96GZ6 507 aa10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 MAP6Q96JE9 813 aa10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 TSPYL1Q9H0U9 437 aa10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 POFUT1Q9H488 388 aa10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 EIF3KQ9UBQ5 218 aaKnown RBP10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 IL19Q9UHD0 177 aa10.07□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 A0A1W2PRD5 423 aa10.06□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 A0A1W2PRF3 423 aa10.06□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 A0A1W2PRM7 423 aa10.06□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 LRRN3E7EW58 273 aa10.06□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 OR2T1O43869 369 aa10.06□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 LYPLA1O75608 230 aaPredicted RBP10.06□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 SNRPAP09012 282 aaKnown RBP10.06□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 FBP1P09467 338 aa10.06□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 CFAP157Q5JU67 520 aa10.06□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 METTL11BQ5VVY1 283 aa10.06□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 KANK2Q63ZY3 851 aa10.06□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 C11orf88Q6PI97 169 aa10.06□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 ZYG11AQ6WRX3 759 aa10.06□□□□□ -0.8
SMAD9-IT1-201ENST00000437983 RNF165Q6ZSG1 346 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms