RNA–Protein interactions for RNA: ENST00000437196.1

EXT1-203, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 5

Gene EXT1, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-203ENST00000437196 KIR2DL3P43628 341 aa11.78□□□□□ -0.52
EXT1-203ENST00000437196 MTNR1AP48039 350 aa11.78□□□□□ -0.52
EXT1-203ENST00000437196 PLP2Q04941 152 aa11.78□□□□□ -0.52
EXT1-203ENST00000437196 GGTLC2Q14390 218 aa11.78□□□□□ -0.52
EXT1-203ENST00000437196 TAB1Q15750 504 aa11.78□□□□□ -0.52
EXT1-203ENST00000437196 TEX30Q5JUR7 227 aa11.78□□□□□ -0.52
EXT1-203ENST00000437196 KRT80Q6KB66 452 aa11.78□□□□□ -0.52
EXT1-203ENST00000437196 ERI1Q8IV48 349 aaKnown RBP11.78□□□□□ -0.52
EXT1-203ENST00000437196 UBE2FQ969M7 185 aa11.78□□□□□ -0.52
EXT1-203ENST00000437196 ZMYND19Q96E35 227 aaPredicted RBP11.78□□□□□ -0.52
EXT1-203ENST00000437196 FOXN4Q96NZ1 517 aa11.78□□□□□ -0.52
EXT1-203ENST00000437196 CNN2Q99439 309 aaKnown RBP11.78□□□□□ -0.52
EXT1-203ENST00000437196 ZNF416Q9BWM5 594 aa11.78□□□□□ -0.52
EXT1-203ENST00000437196 C1orf198Q9H425 327 aa11.78□□□□□ -0.52
EXT1-203ENST00000437196 DNAJC27Q9NZQ0 273 aa11.78□□□□□ -0.52
EXT1-203ENST00000437196 PCDHGB1Q9Y5G3 927 aa11.78□□□□□ -0.52
EXT1-203ENST00000437196 SLC25A15Q9Y619 301 aa11.78□□□□□ -0.52
EXT1-203ENST00000437196 TMEM14AQ9Y6G1 99 aa11.78□□□□□ -0.52
EXT1-203ENST00000437196 COMMD3-BMI1R4GMX3 469 aa11.78□□□□□ -0.52
EXT1-203ENST00000437196 COL12A1Q99715 3063 aa11.78□□□□□ -0.52
EXT1-203ENST00000437196 TVP23AA6NH52 213 aa11.77□□□□□ -0.52
EXT1-203ENST00000437196 ZNF593O00488 134 aaPredicted RBP11.77□□□□□ -0.52
EXT1-203ENST00000437196 HLA-HP01893 362 aa11.77□□□□□ -0.52
EXT1-203ENST00000437196 TFP02787 698 aa11.77□□□□□ -0.52
EXT1-203ENST00000437196 GNAO1P09471 354 aa11.77□□□□□ -0.52
EXT1-203ENST00000437196 CBR1P16152 277 aa11.77□□□□□ -0.52
EXT1-203ENST00000437196 GRNP28799 593 aaKnown RBP11.77□□□□□ -0.52
EXT1-203ENST00000437196 RAB1AP62820 205 aa11.77□□□□□ -0.52
EXT1-203ENST00000437196 C3orf36Q3SXR2 165 aa11.77□□□□□ -0.52
EXT1-203ENST00000437196 SLC16A9Q7RTY1 509 aa11.77□□□□□ -0.52
EXT1-203ENST00000437196 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.77□□□□□ -0.52
EXT1-203ENST00000437196 DMRTC2Q8IXT2 367 aaPredicted RBP11.77□□□□□ -0.52
EXT1-203ENST00000437196 ZNF454Q8N9F8 522 aa11.77□□□□□ -0.52
EXT1-203ENST00000437196 WDR31Q8NA23 367 aa11.77□□□□□ -0.52
EXT1-203ENST00000437196 ZNF511Q8NB15 262 aa11.77□□□□□ -0.52
EXT1-203ENST00000437196 OR6N2Q8NGY6 317 aa11.77□□□□□ -0.52
EXT1-203ENST00000437196 FAM222BQ8WU58 562 aa11.77□□□□□ -0.52
EXT1-203ENST00000437196 WFIKKN1Q96NZ8 548 aa11.77□□□□□ -0.52
EXT1-203ENST00000437196 SPOCK3Q9BQ16 436 aa11.77□□□□□ -0.52
EXT1-203ENST00000437196 YIPF3Q9GZM5 350 aa11.77□□□□□ -0.52
EXT1-203ENST00000437196 EMC7Q9NPA0 242 aa11.77□□□□□ -0.52
EXT1-203ENST00000437196 MRPL22Q9NWU5 206 aaKnown RBP11.77□□□□□ -0.52
EXT1-203ENST00000437196 ASH2LQ9UBL3 628 aa11.77□□□□□ -0.52
EXT1-203ENST00000437196 CYB5R1Q9UHQ9 305 aa11.77□□□□□ -0.52
EXT1-203ENST00000437196 USP9YO00507 2555 aaPredicted RBP11.77□□□□□ -0.53
EXT1-203ENST00000437196 ICE1Q9Y2F5 2266 aa11.77□□□□□ -0.53
EXT1-203ENST00000437196 DOPEY2Q9Y3R5 2298 aa11.77□□□□□ -0.53
EXT1-203ENST00000437196 IQCMA0A1B0GVH7 501 aa11.77□□□□□ -0.53
EXT1-203ENST00000437196 CCDC182A6NF36 153 aa11.77□□□□□ -0.53
EXT1-203ENST00000437196 PHYHO14832 338 aa11.77□□□□□ -0.53
EXT1-203ENST00000437196 DENRO43583 198 aaKnown RBP11.77□□□□□ -0.53
EXT1-203ENST00000437196 GOSR1O95249 250 aa11.77□□□□□ -0.53
EXT1-203ENST00000437196 MPZL1O95297 269 aa11.77□□□□□ -0.53
EXT1-203ENST00000437196 SPARCP09486 303 aa11.77□□□□□ -0.53
EXT1-203ENST00000437196 RNF224P0DH78 156 aa11.77□□□□□ -0.53
EXT1-203ENST00000437196 EPXP11678 715 aa11.77□□□□□ -0.53
EXT1-203ENST00000437196 IGFBP2P18065 325 aa11.77□□□□□ -0.53
EXT1-203ENST00000437196 CDK5R2Q13319 367 aa11.77□□□□□ -0.53
EXT1-203ENST00000437196 ENDOGQ14249 297 aaKnown RBP11.77□□□□□ -0.53
EXT1-203ENST00000437196 PCK2Q16822 640 aa11.77□□□□□ -0.53
EXT1-203ENST00000437196 KLHL22Q53GT1 634 aa11.77□□□□□ -0.53
EXT1-203ENST00000437196 TMEM108Q6UXF1 575 aa11.77□□□□□ -0.53
EXT1-203ENST00000437196 RHOUQ7L0Q8 258 aa11.77□□□□□ -0.53
EXT1-203ENST00000437196 BCDIN3DQ7Z5W3 292 aaKnown RBP11.77□□□□□ -0.53
EXT1-203ENST00000437196 TIGD4Q8IY51 512 aa11.77□□□□□ -0.53
EXT1-203ENST00000437196 IL17RDQ8NFM7 739 aa11.77□□□□□ -0.53
EXT1-203ENST00000437196 FBLIM1Q8WUP2 373 aa11.77□□□□□ -0.53
EXT1-203ENST00000437196 ZNRF4Q8WWF5 429 aa11.77□□□□□ -0.53
EXT1-203ENST00000437196 WDR76Q9H967 626 aa11.77□□□□□ -0.53
EXT1-203ENST00000437196 B3GNT2Q9NY97 397 aa11.77□□□□□ -0.53
EXT1-203ENST00000437196 ATPIF1Q9UII2 106 aa11.77□□□□□ -0.53
EXT1-203ENST00000437196 HEATR1Q9H583 2144 aaKnown RBP11.76□□□□□ -0.53
EXT1-203ENST00000437196 SGCEO43556 437 aa11.76□□□□□ -0.53
EXT1-203ENST00000437196 WBP4O75554 376 aaKnown RBP11.76□□□□□ -0.53
EXT1-203ENST00000437196 FADS2O95864 444 aaKnown RBP11.76□□□□□ -0.53
EXT1-203ENST00000437196 GPANK1O95872 356 aa11.76□□□□□ -0.53
EXT1-203ENST00000437196 IGKV3-15P01624 115 aa11.76□□□□□ -0.53
EXT1-203ENST00000437196 SCG5P05408 212 aa11.76□□□□□ -0.53
EXT1-203ENST00000437196 MMP7P09237 267 aaPredicted RBP11.76□□□□□ -0.53
EXT1-203ENST00000437196 SBK2P0C263 348 aa11.76□□□□□ -0.53
EXT1-203ENST00000437196 ZNF32P17041 273 aa11.76□□□□□ -0.53
EXT1-203ENST00000437196 NUDT6P53370 316 aa11.76□□□□□ -0.53
EXT1-203ENST00000437196 NR1H2P55055 460 aa11.76□□□□□ -0.53
EXT1-203ENST00000437196 CXCR4P61073 352 aa11.76□□□□□ -0.53
EXT1-203ENST00000437196 ACTC1P68032 377 aa11.76□□□□□ -0.53
EXT1-203ENST00000437196 ACTA1P68133 377 aa11.76□□□□□ -0.53
EXT1-203ENST00000437196 PIGFQ07326 219 aa11.76□□□□□ -0.53
EXT1-203ENST00000437196 RAB40BQ12829 278 aa11.76□□□□□ -0.53
EXT1-203ENST00000437196 ECH1Q13011 328 aa11.76□□□□□ -0.53
EXT1-203ENST00000437196 MED21Q13503 144 aa11.76□□□□□ -0.53
EXT1-203ENST00000437196 MEP1BQ16820 701 aa11.76□□□□□ -0.53
EXT1-203ENST00000437196 SLC18B1Q6NT16 456 aa11.76□□□□□ -0.53
EXT1-203ENST00000437196 UGT2A3Q6UWM9 527 aa11.76□□□□□ -0.53
EXT1-203ENST00000437196 MEX3BQ6ZN04 569 aaKnown RBP11.76□□□□□ -0.53
EXT1-203ENST00000437196 DPY19L4Q7Z388 723 aa11.76□□□□□ -0.53
EXT1-203ENST00000437196 MDP1Q86V88 176 aa11.76□□□□□ -0.53
EXT1-203ENST00000437196 WFDC8Q8IUA0 241 aa11.76□□□□□ -0.53
EXT1-203ENST00000437196 OR51G2Q8NGK0 314 aa11.76□□□□□ -0.53
EXT1-203ENST00000437196 OR1J2Q8NGS2 313 aa11.76□□□□□ -0.53
EXT1-203ENST00000437196 LINC01560Q8TB33 94 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms