RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 SCDO00767 359 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 PRRG1O14668 218 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 CCND3P30281 292 aaPredicted RBP6.67□□□□□ -1.34
GARNL3-205ENST00000435213 RPS25P62851 125 aaKnown RBP6.67□□□□□ -1.34
GARNL3-205ENST00000435213 TANGO2Q6ICL3 276 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 ACOT7LQ6ZUV0 252 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 C1orf87Q8N0U7 546 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 RNF175Q8N4F7 328 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 SLC25A31Q9H0C2 315 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 CHODLQ9H9P2 273 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 FGF20Q9NP95 211 aaPredicted RBP6.67□□□□□ -1.34
GARNL3-205ENST00000435213 MRPS18AQ9NVS2 196 aaKnown RBP6.67□□□□□ -1.34
GARNL3-205ENST00000435213 MARCH5Q9NX47 278 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 GULP1Q9UBP9 304 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 NOD1Q9Y239 953 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 FAM96BQ9Y3D0 163 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 CASP8AP2Q9UKL3 1982 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 SCN10AQ9Y5Y9 1956 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 FAM183AA6NL82 134 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 HEPACAM2A8MVW5 462 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 SYT7O43581 403 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 WDR1O75083 606 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 HLA-DPB1P04440 258 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 STAG3L2P0CL84 134 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 TPT1P13693 172 aaKnown RBP6.67□□□□□ -1.34
GARNL3-205ENST00000435213 TIA1P31483 386 aaKnown RBP eCLIP6.67□□□□□ -1.34
GARNL3-205ENST00000435213 MMP15P51511 669 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 EMP2P54851 167 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 ERVFRD-1P60508 538 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 MRPL58Q14197 206 aaKnown RBP6.67□□□□□ -1.34
GARNL3-205ENST00000435213 TMEM241Q24JQ0 296 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 AGBL4Q5VU57 503 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 SFRP4Q6FHJ7 346 aaPredicted RBP6.67□□□□□ -1.34
GARNL3-205ENST00000435213 PAQR6Q6TCH4 344 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 CEACAM20Q6UY09 585 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 COLCA1Q6ZS62 124 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 TTC9BQ8N6N2 239 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 TCEANCQ8N8B7 351 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 NUDCD2Q8WVJ2 157 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 SMARCD2Q92925 531 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 ADIPOR1Q96A54 375 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 PLD4Q96BZ4 506 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 TMEM100Q9NV29 134 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 COMMD9Q9P000 198 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 TRBV4-1A0A0J9YWV2 114 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.67□□□□□ -1.34
GARNL3-205ENST00000435213 GJE1A6NN92 205 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 PRAMEF26H0Y7S4 382 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 UBL3O95164 117 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 PAPLNO95428 1278 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 SOD1P00441 154 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 FGBP02675 491 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 ZNF865P0CJ78 1059 aaPredicted RBP6.67□□□□□ -1.34
GARNL3-205ENST00000435213 TDGF1P13385 188 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 CD22P20273 847 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 ELAVL4P26378 380 aaKnown RBP6.67□□□□□ -1.34
GARNL3-205ENST00000435213 KHKP50053 298 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 ZNF41P51814 821 aaPredicted RBP6.67□□□□□ -1.34
GARNL3-205ENST00000435213 PNLIPRP1P54315 467 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 PFN3P60673 137 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 HBA1P69905 142 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 CDKN3Q16667 212 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 XKR6Q5GH73 641 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 PLEKHS1Q5SXH7 462 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 DCST1Q5T197 706 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 HENMT1Q5T8I9 393 aaKnown RBP6.67□□□□□ -1.34
GARNL3-205ENST00000435213 PRAMEF5Q5TYX0 476 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 GFI1BQ5VTD9 330 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 PRAMEF6Q5VXH4 476 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 CXorf57Q6NSI4 855 aaKnown RBP6.67□□□□□ -1.34
GARNL3-205ENST00000435213 DRAM2Q6UX65 266 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 KLHDC8AQ8IYD2 350 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 OR14K1Q8NGZ2 314 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 NEIL3Q8TAT5 605 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 APOBEC4Q8WW27 367 aaKnown RBP6.67□□□□□ -1.34
GARNL3-205ENST00000435213 ARRDC3Q96B67 414 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 SAT2Q96F10 170 aaPredicted RBP6.67□□□□□ -1.34
GARNL3-205ENST00000435213 KIRREL1Q96J84 757 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 SLC35E1Q96K37 410 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 ZNF75AQ96N20 296 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 CCDC3Q9BQI4 270 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 FAIM2Q9BWQ8 316 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 SMPXQ9UHP9 88 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 ADAM29Q9UKF5 820 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 INSL6Q9Y581 213 aa6.67□□□□□ -1.34
GARNL3-205ENST00000435213 ANAPC1Q9H1A4 1944 aa6.66□□□□□ -1.34
GARNL3-205ENST00000435213 DOCK3Q8IZD9 2030 aa6.66□□□□□ -1.34
GARNL3-205ENST00000435213 CCDC88CQ9P219 2028 aa6.66□□□□□ -1.34
GARNL3-205ENST00000435213 TMEM235A6NFC5 223 aa6.66□□□□□ -1.34
GARNL3-205ENST00000435213 UPK3BL1B0FP48 263 aa6.66□□□□□ -1.34
GARNL3-205ENST00000435213 UPK3BL2E5RIL1 263 aa6.66□□□□□ -1.34
GARNL3-205ENST00000435213 H3BN98 237 aa6.66□□□□□ -1.34
GARNL3-205ENST00000435213 CDC40O60508 579 aaKnown RBP eCLIP6.66□□□□□ -1.34
GARNL3-205ENST00000435213 SERPIND1P05546 499 aa6.66□□□□□ -1.34
GARNL3-205ENST00000435213 SCGB1A1P11684 91 aa6.66□□□□□ -1.34
GARNL3-205ENST00000435213 DVL1P1P54792 670 aaPredicted RBP6.66□□□□□ -1.34
GARNL3-205ENST00000435213 CLDN18P56856 261 aa6.66□□□□□ -1.34
GARNL3-205ENST00000435213 SMIM11AP58511 58 aa6.66□□□□□ -1.34
GARNL3-205ENST00000435213 RANP62826 216 aaKnown RBP6.66□□□□□ -1.34
GARNL3-205ENST00000435213 RAB40BQ12829 278 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms