RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 ISYNA1Q9NPH2 558 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 CLCF1Q9UBD9 225 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 RSL24D1Q9UHA3 163 aaKnown RBP9.96□□□□□ -0.82
LINC00539-203ENST00000434601 LAMP5Q9UJQ1 280 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 KLHDC2Q9Y2U9 406 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 TMEM14AQ9Y6G1 99 aa9.96□□□□□ -0.82
LINC00539-203ENST00000434601 ZNF701M0R085 212 aaPredicted RBP9.95□□□□□ -0.82
LINC00539-203ENST00000434601 CCRL2O00421 344 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 TGM6O95932 706 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 PSKH1P11801 424 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 ZNF823P16415 610 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 CD36P16671 472 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 LAP3P28838 519 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 ACSM1Q08AH1 577 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 MEP1BQ16820 701 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 PHYHD1Q5SRE7 291 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 LRFN4Q6PJG9 635 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 DPY19L4Q7Z388 723 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 P4HA3Q7Z4N8 544 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 ADGRE4PQ86SQ3 457 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 P2RY8Q86VZ1 359 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 KLBQ86Z14 1044 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 SYS1Q8N2H4 156 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 GPR137CQ8N3F9 429 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 ZNF454Q8N9F8 522 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 OR10H5Q8NGA6 315 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 OTOSQ8NHW6 89 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 SNX33Q8WV41 574 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 C11orf40Q8WZ69 217 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 UFD1Q92890 307 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 ISOC1Q96CN7 298 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 FUNDC2Q9BWH2 189 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 ISG20L2Q9H9L3 353 aaKnown RBP9.95□□□□□ -0.82
LINC00539-203ENST00000434601 GP6Q9HCN6 339 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 B3GAT2Q9NPZ5 323 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 TRIM36Q9NQ86 728 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 KCNG2Q9UJ96 466 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 ENPP5Q9UJA9 477 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 NOSIPQ9Y314 301 aaKnown RBP9.95□□□□□ -0.82
LINC00539-203ENST00000434601 UGT2A1Q9Y4X1 527 aa9.95□□□□□ -0.82
LINC00539-203ENST00000434601 MED13LQ71F56 2210 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 J3QLW9 94 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 ZNF593O00488 134 aaPredicted RBP9.94□□□□□ -0.82
LINC00539-203ENST00000434601 DHHO43323 396 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 SLC19A2O60779 497 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 MRPL33O75394 65 aaKnown RBP9.94□□□□□ -0.82
LINC00539-203ENST00000434601 GABARAPO95166 117 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 MPZL1O95297 269 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 LALBAP00709 142 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 YES1P07947 543 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 CPEP16870 476 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 ZNF19P17023 458 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 ALOX5APP20292 161 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 NTF4P34130 210 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 RPS27P42677 84 aaKnown RBP9.94□□□□□ -0.82
LINC00539-203ENST00000434601 RGS6P49758 472 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 ZNF84P51523 738 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 GTF2A1P52655 376 aaPredicted RBP9.94□□□□□ -0.82
LINC00539-203ENST00000434601 TMBIM6P55061 237 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 RIPPLY3P57055 190 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 OR12D2P58182 307 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 TAS2R43P59537 309 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 BDH1Q02338 343 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 EGR3Q06889 387 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 SSX1Q16384 188 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 PCK2Q16822 640 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 ACSF3Q4G176 576 aaPredicted RBP9.94□□□□□ -0.82
LINC00539-203ENST00000434601 TP53I3Q53FA7 332 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 TEX30Q5JUR7 227 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 RIPPLY2Q5TAB7 128 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 OTPQ5XKR4 325 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 SLC18B1Q6NT16 456 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 SLC16A12Q6ZSM3 486 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 FOXL2NBQ6ZUU3 175 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 FAM220AQ7Z4H9 259 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 FGD2Q7Z6J4 655 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 ANKRD13BQ86YJ7 626 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 TUSC5Q8IXB3 177 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 OR5M9Q8NGP3 310 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 RAB2BQ8WUD1 216 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 ASB17Q8WXJ9 295 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 DGCR14Q96DF8 476 aaKnown RBP9.94□□□□□ -0.82
LINC00539-203ENST00000434601 ALKBH3Q96Q83 286 aaPredicted RBP9.94□□□□□ -0.82
LINC00539-203ENST00000434601 TRIB1Q96RU8 372 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 LINC00470Q9BZP3 86 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 NAA50Q9GZZ1 169 aaKnown RBP9.94□□□□□ -0.82
LINC00539-203ENST00000434601 SLCO5A1Q9H2Y9 848 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 SEC61A2Q9H9S3 476 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 CALHM2Q9HA72 323 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 PARPBPQ9NWS1 579 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 CLEC4AQ9UMR7 237 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 DNAJC13O75165 2243 aa9.94□□□□□ -0.82
LINC00539-203ENST00000434601 OR6C65A6NJZ3 312 aa9.93□□□□□ -0.82
LINC00539-203ENST00000434601 AHRRA9YTQ3 701 aa9.93□□□□□ -0.82
LINC00539-203ENST00000434601 PRR32B1ATL7 298 aa9.93□□□□□ -0.82
LINC00539-203ENST00000434601 ZNHIT1O43257 154 aa9.93□□□□□ -0.82
LINC00539-203ENST00000434601 SS18L1O75177 396 aaPredicted RBP9.93□□□□□ -0.82
LINC00539-203ENST00000434601 UPK3AO75631 287 aa9.93□□□□□ -0.82
LINC00539-203ENST00000434601 KRT8P05787 483 aa9.93□□□□□ -0.82
LINC00539-203ENST00000434601 GRNP28799 593 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms