RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 ADRA2CP18825 462 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 CD1CP29017 333 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 CSNK1A1P48729 337 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 MECP2P51608 486 aaKnown RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 ALKBH1Q13686 389 aaKnown RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 TMEM71Q6P5X7 295 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 FAM199XQ6PEV8 388 aaPredicted RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 Q6ZS49 121 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 PXT1Q8NFP0 134 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 OR1J1Q8NGS3 322 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 GHSRQ92847 366 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 GAL3ST4Q96RP7 486 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 FGF21Q9NSA1 209 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 ARFGEF3Q5TH69 2177 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 A0A1W2PR48 441 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 PMS2P1A4D2B8 440 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 B4DEV8 164 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 ALOX12BO75342 701 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 PIAS2O75928 621 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 ALDOBP05062 364 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 H2BFMP0C1H6 154 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 PTAFRP25105 342 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 RAB1AP62820 205 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 ABHD17BQ5VST6 288 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 C12orf45Q8N5I9 185 aaPredicted RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 SLC16A11Q8NCK7 471 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 OR5M8Q8NGP6 311 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 RNASE11Q8TAA1 199 aaKnown RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 ERGIC1Q969X5 290 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF681Q96N22 645 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 OR8B4Q96RC9 309 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 TMEM121BQ9BXQ6 578 aaPredicted RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 RNF122Q9H9V4 155 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 COMMD3Q9UBI1 195 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 EIF3KQ9UBQ5 218 aaKnown RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 GTF2A1LQ9UNN4 478 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 KLF13Q9Y2Y9 288 aaPredicted RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 FER1L5A0AVI2 2057 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 SYT7O43581 403 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF888P0CJ79 500 aaPredicted RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 PAX6P26367 422 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 NTHL1P78549 312 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 PCK2Q16822 640 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 LSRQ86X29 649 aaPredicted RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 C17orf78Q8N4C9 275 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 OR5H2Q8NGV7 314 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 NCOR1P1Q9H4R4 102 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 PILRAQ9UKJ1 303 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 YBX2Q9Y2T7 364 aaKnown RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 OGG1O15527 345 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 SCO2O43819 266 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 OR2J2O76002 312 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 RAB4AP20338 218 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 CSF2RBP32927 897 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 NAA10P41227 235 aaPredicted RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 HCCSP53701 268 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 RAC1P63000 192 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 LBHQ53QV2 105 aaPredicted RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 H3F3CQ6NXT2 135 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 CLECL1Q8IZS7 167 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 GALNT16Q8N428 558 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 ZNF433Q8N7K0 673 aaPredicted RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 TRMT10AQ8TBZ6 339 aaKnown RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 MAL2Q969L2 176 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 MMABQ96EY8 250 aaPredicted RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 DERL3Q96Q80 235 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 ZBTB20Q9HC78 741 aaPredicted RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 IGKV3D-11A0A0A0MRZ8 115 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 CPSF4LA6NMK7 179 aaKnown RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 SOCS6O14544 535 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 SLC31A1O15431 190 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 PLGP00747 810 aaPredicted RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 HLA-AP01891 365 aaKnown RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 PRKAG1P54619 331 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 C17orf107Q6ZR85 190 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 CD163Q86VB7 1156 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 SULF2Q8IWU5 870 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 M1APQ8TC57 530 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 RAB8BQ92930 207 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 TCEAL3Q969E4 200 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 RPUSD4Q96CM3 377 aaKnown RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 ADTRPQ96IZ2 230 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 NPDC1Q9NQX5 325 aaPredicted RBP3.42□□□□□ -1.86
SHPRH-205ENST00000433355 C14orf119Q9NWQ9 140 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 SLAMF8Q9P0V8 285 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 PRSS21Q9Y6M0 314 aa3.42□□□□□ -1.86
SHPRH-205ENST00000433355 IDSB3KWA1 339 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 LCMT2O60294 686 aaKnown RBP3.41□□□□□ -1.86
SHPRH-205ENST00000433355 DHRS3O75911 302 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 GOSR1O95249 250 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 GASTP01350 101 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 CD74P04233 296 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 HEXBP07686 556 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 HLA-GP17693 338 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 ZP3P21754 424 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 GCSHP23434 173 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 CLRN1P58418 232 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 RAC3P60763 192 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 FOXB2Q5VYV0 432 aa3.41□□□□□ -1.86
SHPRH-205ENST00000433355 NAA40Q86UY6 237 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms