RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 DNAJC27Q9NZQ0 273 aa12.49□□□□□ -0.41
LAMA4-208ENST00000431543 PCDHGB1Q9Y5G3 927 aa12.49□□□□□ -0.41
LAMA4-208ENST00000431543 ALPK2Q86TB3 2170 aa12.48□□□□□ -0.41
LAMA4-208ENST00000431543 FAM20BO75063 409 aa12.48□□□□□ -0.41
LAMA4-208ENST00000431543 ATE1O95260 518 aa12.48□□□□□ -0.41
LAMA4-208ENST00000431543 CCDC159P0C7I6 412 aa12.48□□□□□ -0.41
LAMA4-208ENST00000431543 ZNF823P16415 610 aa12.48□□□□□ -0.41
LAMA4-208ENST00000431543 NPR2P20594 1047 aa12.48□□□□□ -0.41
LAMA4-208ENST00000431543 GSTT1P30711 240 aa12.48□□□□□ -0.41
LAMA4-208ENST00000431543 MTNR1AP48039 350 aa12.48□□□□□ -0.41
LAMA4-208ENST00000431543 ROR2Q01974 943 aaKnown RBP12.48□□□□□ -0.41
LAMA4-208ENST00000431543 PPA1Q15181 289 aa12.48□□□□□ -0.41
LAMA4-208ENST00000431543 TIMM23BQ5SRD1 257 aa12.48□□□□□ -0.41
LAMA4-208ENST00000431543 PHYHD1Q5SRE7 291 aa12.48□□□□□ -0.41
LAMA4-208ENST00000431543 LRFN4Q6PJG9 635 aa12.48□□□□□ -0.41
LAMA4-208ENST00000431543 SLC25A47Q6Q0C1 308 aa12.48□□□□□ -0.41
LAMA4-208ENST00000431543 PAMR1Q6UXH9 720 aa12.48□□□□□ -0.41
LAMA4-208ENST00000431543 LURAP1LQ8IV03 231 aa12.48□□□□□ -0.41
LAMA4-208ENST00000431543 MYDGFQ969H8 173 aa12.48□□□□□ -0.41
LAMA4-208ENST00000431543 CDADC1Q9BWV3 514 aa12.48□□□□□ -0.41
LAMA4-208ENST00000431543 C1QTNF6Q9BXI9 259 aa12.48□□□□□ -0.41
LAMA4-208ENST00000431543 KCNN2Q9H2S1 579 aa12.48□□□□□ -0.41
LAMA4-208ENST00000431543 SEC61A2Q9H9S3 476 aa12.48□□□□□ -0.41
LAMA4-208ENST00000431543 UBTD1Q9HAC8 227 aa12.48□□□□□ -0.41
LAMA4-208ENST00000431543 PLCXD1Q9NUJ7 323 aa12.48□□□□□ -0.41
LAMA4-208ENST00000431543 MYRFQ9Y2G1 1151 aa12.48□□□□□ -0.41
LAMA4-208ENST00000431543 COA3Q9Y2R0 106 aaPredicted RBP12.48□□□□□ -0.41
LAMA4-208ENST00000431543 ROS1P08922 2347 aa12.48□□□□□ -0.41
LAMA4-208ENST00000431543 A0A1W2PPL8 197 aa12.47□□□□□ -0.41
LAMA4-208ENST00000431543 EFCAB10A6NFE3 127 aa12.47□□□□□ -0.41
LAMA4-208ENST00000431543 RPL36A-HNRNPH2H7BZ11 118 aa12.47□□□□□ -0.41
LAMA4-208ENST00000431543 WBP4O75554 376 aaKnown RBP12.47□□□□□ -0.41
LAMA4-208ENST00000431543 FARS2O95363 451 aaKnown RBP12.47□□□□□ -0.41
LAMA4-208ENST00000431543 FADS2O95864 444 aaKnown RBP12.47□□□□□ -0.41
LAMA4-208ENST00000431543 GYPBP06028 91 aa12.47□□□□□ -0.41
LAMA4-208ENST00000431543 CTLA4P16410 223 aa12.47□□□□□ -0.41
LAMA4-208ENST00000431543 DNASE1P24855 282 aa12.47□□□□□ -0.41
LAMA4-208ENST00000431543 LAP3P28838 519 aa12.47□□□□□ -0.41
LAMA4-208ENST00000431543 MPGP29372 298 aa12.47□□□□□ -0.41
LAMA4-208ENST00000431543 ZNF133P52736 654 aaPredicted RBP12.47□□□□□ -0.41
LAMA4-208ENST00000431543 ART1P52961 327 aa12.47□□□□□ -0.41
LAMA4-208ENST00000431543 SH3BGRP55822 239 aaPredicted RBP12.47□□□□□ -0.41
LAMA4-208ENST00000431543 NCMAPQ5T1S8 102 aa12.47□□□□□ -0.41
LAMA4-208ENST00000431543 C10orf128Q5T292 105 aa12.47□□□□□ -0.41
LAMA4-208ENST00000431543 ZNF704Q6ZNC4 412 aaPredicted RBP12.47□□□□□ -0.41
LAMA4-208ENST00000431543 BCDIN3DQ7Z5W3 292 aaKnown RBP12.47□□□□□ -0.41
LAMA4-208ENST00000431543 OR10H5Q8NGA6 315 aa12.47□□□□□ -0.41
LAMA4-208ENST00000431543 OR51L1Q8NGJ5 315 aa12.47□□□□□ -0.41
LAMA4-208ENST00000431543 LILRB1Q8NHL6 650 aaPredicted RBP12.47□□□□□ -0.41
LAMA4-208ENST00000431543 APH1BQ8WW43 257 aa12.47□□□□□ -0.41
LAMA4-208ENST00000431543 IPCEF1Q8WWN9 437 aaPredicted RBP12.47□□□□□ -0.41
LAMA4-208ENST00000431543 NEUROG1Q92886 237 aa12.47□□□□□ -0.41
LAMA4-208ENST00000431543 MUCL1Q96DR8 90 aa12.47□□□□□ -0.41
LAMA4-208ENST00000431543 ZNF837Q96EG3 531 aaPredicted RBP12.47□□□□□ -0.41
LAMA4-208ENST00000431543 RNFT2Q96EX2 444 aa12.47□□□□□ -0.41
LAMA4-208ENST00000431543 TSSK2Q96PF2 358 aa12.47□□□□□ -0.41
LAMA4-208ENST00000431543 ALKBH3Q96Q83 286 aaPredicted RBP12.47□□□□□ -0.41
LAMA4-208ENST00000431543 NR1H4Q96RI1 486 aaPredicted RBP12.47□□□□□ -0.41
LAMA4-208ENST00000431543 USB1Q9BQ65 265 aaKnown RBP12.47□□□□□ -0.41
LAMA4-208ENST00000431543 TMEM204Q9BSN7 226 aa12.47□□□□□ -0.41
LAMA4-208ENST00000431543 GPR35Q9HC97 309 aa12.47□□□□□ -0.41
LAMA4-208ENST00000431543 CHCHD3Q9NX63 227 aaKnown RBP12.47□□□□□ -0.41
LAMA4-208ENST00000431543 HAO2Q9NYQ3 351 aa12.47□□□□□ -0.41
LAMA4-208ENST00000431543 UBAP1Q9NZ09 502 aa12.47□□□□□ -0.41
LAMA4-208ENST00000431543 AASSQ9UDR5 926 aa12.47□□□□□ -0.41
LAMA4-208ENST00000431543 SLC25A15Q9Y619 301 aa12.47□□□□□ -0.41
LAMA4-208ENST00000431543 IGLV1-36A0A0B4J1U3 117 aa12.46□□□□□ -0.41
LAMA4-208ENST00000431543 FAM171A2A8MVW0 826 aa12.46□□□□□ -0.41
LAMA4-208ENST00000431543 RAF1P04049 648 aa12.46□□□□□ -0.41
LAMA4-208ENST00000431543 CLUP10909 449 aa12.46□□□□□ -0.41
LAMA4-208ENST00000431543 CD53P19397 219 aa12.46□□□□□ -0.41
LAMA4-208ENST00000431543 EEF1B2P24534 225 aaKnown RBP12.46□□□□□ -0.41
LAMA4-208ENST00000431543 PYCR1P32322 319 aa12.46□□□□□ -0.41
LAMA4-208ENST00000431543 ZNF83P51522 516 aa12.46□□□□□ -0.41
LAMA4-208ENST00000431543 CHN2P52757 468 aa12.46□□□□□ -0.41
LAMA4-208ENST00000431543 NR1H2P55055 460 aa12.46□□□□□ -0.41
LAMA4-208ENST00000431543 HSF2Q03933 536 aa12.46□□□□□ -0.41
LAMA4-208ENST00000431543 FMODQ06828 376 aa12.46□□□□□ -0.41
LAMA4-208ENST00000431543 BSPH1Q075Z2 132 aa12.46□□□□□ -0.41
LAMA4-208ENST00000431543 RAB40BQ12829 278 aa12.46□□□□□ -0.41
LAMA4-208ENST00000431543 NRN1LQ496H8 165 aa12.46□□□□□ -0.41
LAMA4-208ENST00000431543 HIKESHIQ53FT3 197 aa12.46□□□□□ -0.41
LAMA4-208ENST00000431543 OR7E24Q6IFN5 339 aa12.46□□□□□ -0.41
LAMA4-208ENST00000431543 P2RY8Q86VZ1 359 aa12.46□□□□□ -0.41
LAMA4-208ENST00000431543 STX19Q8N4C7 294 aa12.46□□□□□ -0.41
LAMA4-208ENST00000431543 ZNF540Q8NDQ6 660 aa12.46□□□□□ -0.41
LAMA4-208ENST00000431543 BBS1Q8NFJ9 593 aa12.46□□□□□ -0.41
LAMA4-208ENST00000431543 NINJ1Q92982 152 aa12.46□□□□□ -0.41
LAMA4-208ENST00000431543 NMD3Q96D46 503 aaKnown RBP12.46□□□□□ -0.41
LAMA4-208ENST00000431543 CNN2Q99439 309 aaKnown RBP12.46□□□□□ -0.41
LAMA4-208ENST00000431543 HCAR1Q9BXC0 346 aa12.46□□□□□ -0.41
LAMA4-208ENST00000431543 AMBNQ9NP70 447 aa12.46□□□□□ -0.41
LAMA4-208ENST00000431543 CCNB1IP1Q9NPC3 277 aa12.46□□□□□ -0.41
LAMA4-208ENST00000431543 SLC17A5Q9NRA2 495 aa12.46□□□□□ -0.41
LAMA4-208ENST00000431543 CNOT2Q9NZN8 540 aaKnown RBP12.46□□□□□ -0.41
LAMA4-208ENST00000431543 PRRC2AP48634 2157 aaKnown RBP12.46□□□□□ -0.42
LAMA4-208ENST00000431543 HIVEP1P15822 2718 aa12.45□□□□□ -0.42
LAMA4-208ENST00000431543 ZNF99A8MXY4 864 aaPredicted RBP12.45□□□□□ -0.42
LAMA4-208ENST00000431543 PTGES3LE9PB15 166 aa12.45□□□□□ -0.42
LAMA4-208ENST00000431543 SLC1A7O00341 560 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms