RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 MSH6P52701 1360 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 DENND4AQ7Z401 1863 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 THSD7BQ9C0I4 1608 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 A0A1B0GW15 77 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 CENPXA8MT69 81 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 CDC7O00311 574 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 SCN2BO60939 215 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 CLDN11O75508 207 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 LYPLA1O75608 230 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 KLHL2O95198 593 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 BRI3O95415 125 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 SEMG1P04279 462 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 KLK1P06870 262 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 DNAH10OSP0CZ25 163 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 TCN1P20061 433 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 TBPP20226 339 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 FOXN2P32314 431 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 CRATP43155 626 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 KIR2DS4P43632 304 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 GPR6P46095 362 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 CSNK1A1P48729 337 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 SSR4P51571 173 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 UCNP55089 124 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 UBE2IP63279 158 aaKnown RBP2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 ZNF92Q03936 586 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 TLE4Q04727 773 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 PMS2P3Q13401 168 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 TRMT5Q32P41 509 aaKnown RBP2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 ATAD3CQ5T2N8 411 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 C1orf146Q5VVC0 180 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 C11orf71Q6IPW1 123 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 SPESP1Q6UW49 350 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 LINC00336Q6ZUF6 198 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 SLC35D2Q76EJ3 337 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 CYP4Z1Q86W10 505 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 RALGPS2Q86X27 583 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 PLA2G4DQ86XP0 818 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 CBLN2Q8IUK8 224 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 ZNF547Q8IVP9 402 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 NKAIN4Q8IVV8 208 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 FBXO16Q8IX29 292 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 NELFCDQ8IXH7 590 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 ZBED8Q8IZ13 594 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 TMEM61Q8N0U2 210 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 SYS1Q8N2H4 156 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 LIX1Q8N485 282 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 TMEM252Q8N6L7 170 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 NKAPP1Q8N9T2 125 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 CYB561A3Q8NBI2 242 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 MDS2Q8NDY4 140 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 OR7G1Q8NGA0 311 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 OR5K2Q8NHB8 316 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 FANK1Q8TC84 345 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 ACOT11Q8WXI4 607 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 BAALCQ8WXS3 180 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 FGGYQ96C11 551 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 CCDC124Q96CT7 223 aaKnown RBP2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 DYNLL2Q96FJ2 89 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 RNF170Q96K19 258 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 KIR2DL4Q99706 377 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 NAPGQ99747 312 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 DEFB126Q9BYW3 111 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 ZYG11BQ9C0D3 744 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 CHRNA10Q9GZZ6 450 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 OR51J1Q9H342 316 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 SRMSQ9H3Y6 488 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 ZNF702PQ9H963 129 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 ANKHQ9HCJ1 492 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 DMAP1Q9NPF5 467 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 HRASLS2Q9NWW9 162 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 ABCD2Q9UBJ2 740 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 APOBEC3BQ9UH17 382 aaKnown RBP2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 MRM2Q9UI43 246 aaKnown RBP2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 ST3GAL6Q9Y274 331 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 POGZQ7Z3K3 1410 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 AGRNO00468 2067 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 ADGRA3Q8IWK6 1321 aa2.14□□□□□ -2.07
HMGB1P9-201ENST00000429856 PSMB11A5LHX3 300 aa2.13□□□□□ -2.07
HMGB1P9-201ENST00000429856 SLC22A20A6NK97 555 aa2.13□□□□□ -2.07
HMGB1P9-201ENST00000429856 H0YHG0 523 aa2.13□□□□□ -2.07
HMGB1P9-201ENST00000429856 PLPP1O14494 284 aa2.13□□□□□ -2.07
HMGB1P9-201ENST00000429856 DPM1O60762 260 aa2.13□□□□□ -2.07
HMGB1P9-201ENST00000429856 TBL1XO60907 577 aa2.13□□□□□ -2.07
HMGB1P9-201ENST00000429856 EIF3GO75821 320 aaKnown RBP eCLIP2.13□□□□□ -2.07
HMGB1P9-201ENST00000429856 SC5DO75845 299 aa2.13□□□□□ -2.07
HMGB1P9-201ENST00000429856 LCA5LO95447 670 aa2.13□□□□□ -2.07
HMGB1P9-201ENST00000429856 CST4P01036 141 aa2.13□□□□□ -2.07
HMGB1P9-201ENST00000429856 THY1P04216 161 aa2.13□□□□□ -2.07
HMGB1P9-201ENST00000429856 RPN2P04844 631 aa2.13□□□□□ -2.07
HMGB1P9-201ENST00000429856 KRTAP1-4P0C5Y4 121 aa2.13□□□□□ -2.07
HMGB1P9-201ENST00000429856 CSNK2A2P19784 350 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P9-201ENST00000429856 ZP3P21754 424 aa2.13□□□□□ -2.07
HMGB1P9-201ENST00000429856 HTR2CP28335 458 aa2.13□□□□□ -2.07
HMGB1P9-201ENST00000429856 NTSP30990 170 aa2.13□□□□□ -2.07
HMGB1P9-201ENST00000429856 CSKP41240 450 aa2.13□□□□□ -2.07
HMGB1P9-201ENST00000429856 TNFSF9P41273 254 aa2.13□□□□□ -2.07
HMGB1P9-201ENST00000429856 SERPINB8P50452 374 aa2.13□□□□□ -2.07
HMGB1P9-201ENST00000429856 RND2P52198 227 aa2.13□□□□□ -2.07
HMGB1P9-201ENST00000429856 SUB1P53999 127 aaKnown RBP eCLIP2.13□□□□□ -2.07
HMGB1P9-201ENST00000429856 APOC4P55056 127 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms