RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 SLC7A2P52569 658 aa14.52□□□□□ -0.09
TRIM39-209ENST00000428728 RAP1BP61224 184 aa14.52□□□□□ -0.09
TRIM39-209ENST00000428728 RAP1AP62834 184 aa14.52□□□□□ -0.09
TRIM39-209ENST00000428728 LIPEQ05469 1076 aa14.52□□□□□ -0.09
TRIM39-209ENST00000428728 PRKCDQ05655 676 aa14.52□□□□□ -0.09
TRIM39-209ENST00000428728 ENDOGQ14249 297 aaKnown RBP14.52□□□□□ -0.09
TRIM39-209ENST00000428728 HFEQ30201 348 aa14.52□□□□□ -0.09
TRIM39-209ENST00000428728 IFI44LQ53G44 452 aa14.52□□□□□ -0.09
TRIM39-209ENST00000428728 UNQ6126/PRO20091Q6UXV3 157 aa14.52□□□□□ -0.09
TRIM39-209ENST00000428728 SLC15A3Q8IY34 581 aa14.52□□□□□ -0.09
TRIM39-209ENST00000428728 ALDH16A1Q8IZ83 802 aa14.52□□□□□ -0.09
TRIM39-209ENST00000428728 FNDC8Q8TC99 324 aa14.52□□□□□ -0.09
TRIM39-209ENST00000428728 ELMOD3Q96FG2 381 aa14.52□□□□□ -0.09
TRIM39-209ENST00000428728 TIMD4Q96H15 378 aa14.52□□□□□ -0.09
TRIM39-209ENST00000428728 EMC7Q9NPA0 242 aa14.52□□□□□ -0.09
TRIM39-209ENST00000428728 ADAM18Q9Y3Q7 739 aa14.52□□□□□ -0.09
TRIM39-209ENST00000428728 ISPDA4D126 451 aa14.51□□□□□ -0.09
TRIM39-209ENST00000428728 HTR3EA5X5Y0 456 aa14.51□□□□□ -0.09
TRIM39-209ENST00000428728 NME4O00746 187 aa14.51□□□□□ -0.09
TRIM39-209ENST00000428728 SLC22A2O15244 555 aa14.51□□□□□ -0.09
TRIM39-209ENST00000428728 NGFP01138 241 aa14.51□□□□□ -0.09
TRIM39-209ENST00000428728 IGHV2-5P01817 119 aa14.51□□□□□ -0.09
TRIM39-209ENST00000428728 RPL4P36578 427 aaKnown RBP14.51□□□□□ -0.09
TRIM39-209ENST00000428728 PCBD1P61457 104 aa14.51□□□□□ -0.09
TRIM39-209ENST00000428728 HNRNPA0Q13151 305 aaKnown RBP14.51□□□□□ -0.09
TRIM39-209ENST00000428728 FHL1Q13642 323 aa14.51□□□□□ -0.09
TRIM39-209ENST00000428728 FAM209AQ5JX71 171 aa14.51□□□□□ -0.09
TRIM39-209ENST00000428728 MBNL2Q5VZF2 373 aaKnown RBP14.51□□□□□ -0.09
TRIM39-209ENST00000428728 ACSM5Q6NUN0 579 aa14.51□□□□□ -0.09
TRIM39-209ENST00000428728 TBPL2Q6SJ96 375 aa14.51□□□□□ -0.09
TRIM39-209ENST00000428728 FOXL2NBQ6ZUU3 175 aa14.51□□□□□ -0.09
TRIM39-209ENST00000428728 FKBP9P1Q75LS8 142 aa14.51□□□□□ -0.09
TRIM39-209ENST00000428728 ACOT11Q8WXI4 607 aaPredicted RBP14.51□□□□□ -0.09
TRIM39-209ENST00000428728 CCL17Q92583 94 aa14.51□□□□□ -0.09
TRIM39-209ENST00000428728 HSH2DQ96JZ2 352 aa14.51□□□□□ -0.09
TRIM39-209ENST00000428728 GAL3ST1Q99999 423 aa14.51□□□□□ -0.09
TRIM39-209ENST00000428728 AP3M1Q9Y2T2 418 aa14.51□□□□□ -0.09
TRIM39-209ENST00000428728 TIMM10BQ9Y5J6 103 aa14.51□□□□□ -0.09
TRIM39-209ENST00000428728 LOC105371242A0A075B767 164 aa14.5□□□□□ -0.09
TRIM39-209ENST00000428728 A0A087WUU8 490 aa14.5□□□□□ -0.09
TRIM39-209ENST00000428728 CDC42EP2O14613 210 aa14.5□□□□□ -0.09
TRIM39-209ENST00000428728 PLPP2O43688 288 aa14.5□□□□□ -0.09
TRIM39-209ENST00000428728 DEAF1O75398 565 aaPredicted RBP14.5□□□□□ -0.09
TRIM39-209ENST00000428728 ABHD16AO95870 558 aa14.5□□□□□ -0.09
TRIM39-209ENST00000428728 SERPINA1P01009 418 aa14.5□□□□□ -0.09
TRIM39-209ENST00000428728 SCG5P05408 212 aa14.5□□□□□ -0.09
TRIM39-209ENST00000428728 COX4I1P13073 169 aa14.5□□□□□ -0.09
TRIM39-209ENST00000428728 ANPEPP15144 967 aa14.5□□□□□ -0.09
TRIM39-209ENST00000428728 SLC9A3P48764 834 aa14.5□□□□□ -0.09
TRIM39-209ENST00000428728 SEMA6DQ8NFY4 1073 aa14.5□□□□□ -0.09
TRIM39-209ENST00000428728 RP9Q8TA86 221 aaKnown RBP14.5□□□□□ -0.09
TRIM39-209ENST00000428728 RAB1CQ92928 201 aa14.5□□□□□ -0.09
TRIM39-209ENST00000428728 Q96M85 177 aa14.5□□□□□ -0.09
TRIM39-209ENST00000428728 ZNF570Q96NI8 536 aa14.5□□□□□ -0.09
TRIM39-209ENST00000428728 ELOVL3Q9HB03 270 aa14.5□□□□□ -0.09
TRIM39-209ENST00000428728 MSL2Q9HCI7 577 aa14.5□□□□□ -0.09
TRIM39-209ENST00000428728 G6PC2Q9NQR9 355 aa14.5□□□□□ -0.09
TRIM39-209ENST00000428728 POLE4Q9NR33 117 aa14.5□□□□□ -0.09
TRIM39-209ENST00000428728 A0A0G2JMP0 313 aa14.49□□□□□ -0.09
TRIM39-209ENST00000428728 A0A0X1KG70 313 aa14.49□□□□□ -0.09
TRIM39-209ENST00000428728 C12orf71A8MTZ7 269 aa14.49□□□□□ -0.09
TRIM39-209ENST00000428728 XKRYO14609 159 aa14.49□□□□□ -0.09
TRIM39-209ENST00000428728 TIMM8AO60220 97 aaPredicted RBP14.49□□□□□ -0.09
TRIM39-209ENST00000428728 DOK2O60496 412 aa14.49□□□□□ -0.09
TRIM39-209ENST00000428728 PRSS23O95084 383 aa14.49□□□□□ -0.09
TRIM39-209ENST00000428728 NCK1P16333 377 aa14.49□□□□□ -0.09
TRIM39-209ENST00000428728 EPHA1P21709 976 aa14.49□□□□□ -0.09
TRIM39-209ENST00000428728 HTR5AP47898 357 aa14.49□□□□□ -0.09
TRIM39-209ENST00000428728 GSK3BP49841 420 aa14.49□□□□□ -0.09
TRIM39-209ENST00000428728 ARHGDIAP52565 204 aa14.49□□□□□ -0.09
TRIM39-209ENST00000428728 SCGB2A2Q13296 93 aa14.49□□□□□ -0.09
TRIM39-209ENST00000428728 ANKDD1AQ495B1 522 aa14.49□□□□□ -0.09
TRIM39-209ENST00000428728 SPRNQ5BIV9 151 aa14.49□□□□□ -0.09
TRIM39-209ENST00000428728 MESTQ5EB52 335 aa14.49□□□□□ -0.09
TRIM39-209ENST00000428728 OTPQ5XKR4 325 aa14.49□□□□□ -0.09
TRIM39-209ENST00000428728 C1orf229Q6ZS94 237 aaPredicted RBP14.49□□□□□ -0.09
TRIM39-209ENST00000428728 MBOAT2Q6ZWT7 520 aa14.49□□□□□ -0.09
TRIM39-209ENST00000428728 CBLL1Q75N03 491 aa14.49□□□□□ -0.09
TRIM39-209ENST00000428728 OR4M2Q8NGB6 313 aa14.49□□□□□ -0.09
TRIM39-209ENST00000428728 FAM162AQ96A26 154 aa14.49□□□□□ -0.09
TRIM39-209ENST00000428728 FAM46AQ96IP4 442 aaKnown RBP14.49□□□□□ -0.09
TRIM39-209ENST00000428728 C4orf45Q96LM5 186 aa14.49□□□□□ -0.09
TRIM39-209ENST00000428728 EGLN1Q9GZT9 426 aa14.49□□□□□ -0.09
TRIM39-209ENST00000428728 POFUT1Q9H488 388 aa14.49□□□□□ -0.09
TRIM39-209ENST00000428728 CYSLTR2Q9NS75 346 aa14.49□□□□□ -0.09
TRIM39-209ENST00000428728 ZNF446Q9NWS9 450 aa14.49□□□□□ -0.09
TRIM39-209ENST00000428728 UBAP1Q9NZ09 502 aa14.49□□□□□ -0.09
TRIM39-209ENST00000428728 GRHPRQ9UBQ7 328 aa14.49□□□□□ -0.09
TRIM39-209ENST00000428728 H3BSA7 217 aa14.48□□□□□ -0.09
TRIM39-209ENST00000428728 UBOX5O94941 541 aa14.48□□□□□ -0.09
TRIM39-209ENST00000428728 AVPP01185 164 aa14.48□□□□□ -0.09
TRIM39-209ENST00000428728 CD14P08571 375 aa14.48□□□□□ -0.09
TRIM39-209ENST00000428728 ZNF26P17031 533 aaPredicted RBP14.48□□□□□ -0.09
TRIM39-209ENST00000428728 ADRA2CP18825 462 aa14.48□□□□□ -0.09
TRIM39-209ENST00000428728 NUDT2P50583 147 aa14.48□□□□□ -0.09
TRIM39-209ENST00000428728 KRR1Q13601 381 aaKnown RBP14.48□□□□□ -0.09
TRIM39-209ENST00000428728 ZBED5Q49AG3 693 aa14.48□□□□□ -0.09
TRIM39-209ENST00000428728 ZMAT1Q5H9K5 638 aa14.48□□□□□ -0.09
TRIM39-209ENST00000428728 FGD3Q5JSP0 725 aa14.48□□□□□ -0.09
TRIM39-209ENST00000428728 DCAF12L2Q5VW00 463 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms