RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 KCNJ15Q99712 375 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 NKX3-1Q99801 234 aaPredicted RBP9.27□□□□□ -0.93
HDAC9-210ENST00000428307 MFRPQ9BY79 579 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 EMC7Q9NPA0 242 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 ANXA2P2A6NMY6 339 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 TNFSF15O95150 251 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 HLA-DQB1P01920 261 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 ANXA2P07355 339 aaKnown RBP9.27□□□□□ -0.93
HDAC9-210ENST00000428307 ENPP1P22413 925 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 FKBP2P26885 142 aaKnown RBP9.27□□□□□ -0.93
HDAC9-210ENST00000428307 MAP2K3P46734 347 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 EIF2B2P49770 351 aaKnown RBP9.27□□□□□ -0.93
HDAC9-210ENST00000428307 CLDN17P56750 224 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 SPINK14Q6IE38 97 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 KRT74Q7RTS7 529 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 PRSS45Q7RTY3 260 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 RAB43Q86YS6 212 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 DND1Q8IYX4 353 aaKnown RBP9.27□□□□□ -0.93
HDAC9-210ENST00000428307 CMTM4Q8IZR5 234 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 CDC6Q99741 560 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 KLHL9Q9P2J3 617 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 NLKQ9UBE8 527 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 CPAMD8Q8IZJ3 1885 aa9.27□□□□□ -0.93
HDAC9-210ENST00000428307 PCNX2A6NKB5 2137 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 TMEM269A0A1B0GVZ9 245 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 TNFSF11O14788 317 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 LYRM1O43325 122 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 TRAPPC6AO75865 159 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 ZNF432O94892 652 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 RAF1P04049 648 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 QDPRP09417 244 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 CD3GP09693 182 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 H2BFMP0C1H6 154 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 PRKAR1AP10644 381 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 LAP3P28838 519 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 CYB561P49447 251 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 SRP9P49458 86 aaKnown RBP9.26□□□□□ -0.93
HDAC9-210ENST00000428307 CCR9P51686 369 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 CHAF1BQ13112 559 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 PYHIN1Q6K0P9 492 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 FDX2Q6P4F2 183 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 LRRTM1Q86UE6 522 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 ZNF227Q86WZ6 799 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 UBQLNLQ8IYU4 475 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 ADPRHL1Q8NDY3 354 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 NOXO1Q8NFA2 376 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 OR6X1Q8NH79 312 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 OR14L1PQ8NHC6 308 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 MCHR2Q969V1 340 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 RFT1Q96AA3 541 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 POLR1DQ9Y2S0 133 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 PCDHGA9Q9Y5G4 932 aaKnown RBP9.26□□□□□ -0.93
HDAC9-210ENST00000428307 N6AMT1Q9Y5N5 214 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 TRBV5-7A0A0A0MS05 114 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 A0A0J9YW62 118 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 LOC101059948A0A1B0GTJ6 334 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 FAM240BA0A1B0GVZ2 78 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 HSPB2A8KAH6 182 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 AQP8O94778 261 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 CLDN20P56880 219 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 H3F3AP84243 136 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 TRIP6Q15654 476 aaKnown RBP9.26□□□□□ -0.93
HDAC9-210ENST00000428307 HSPB2Q16082 182 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 PCK2Q16822 640 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 H3F3CQ6NXT2 135 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 PLET1Q6UQ28 207 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 AKAP14Q86UN6 197 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 CATSPERDQ86XM0 798 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 SLAMF6Q96DU3 332 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 TMEM41AQ96HV5 264 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 ZNF385AQ96PM9 386 aaKnown RBP9.26□□□□□ -0.93
HDAC9-210ENST00000428307 PIGQQ9BRB3 760 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 DEPPQ9NTK1 212 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 RBFOX1Q9NWB1 397 aaKnown RBP9.26□□□□□ -0.93
HDAC9-210ENST00000428307 OR5V1Q9UGF6 321 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 IL17BQ9UHF5 180 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 CYB5R1Q9UHQ9 305 aa9.26□□□□□ -0.93
HDAC9-210ENST00000428307 COL27A1Q8IZC6 1860 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-210ENST00000428307 MEIOCA2RUB1 952 aa9.25□□□□□ -0.93
HDAC9-210ENST00000428307 GALR2O43603 387 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-210ENST00000428307 PMS2P2O95744 297 aa9.25□□□□□ -0.93
HDAC9-210ENST00000428307 HRGP04196 525 aa9.25□□□□□ -0.93
HDAC9-210ENST00000428307 RFC3P40938 356 aa9.25□□□□□ -0.93
HDAC9-210ENST00000428307 STARP49675 285 aa9.25□□□□□ -0.93
HDAC9-210ENST00000428307 RAC1P63000 192 aa9.25□□□□□ -0.93
HDAC9-210ENST00000428307 DGCR2P98153 550 aa9.25□□□□□ -0.93
HDAC9-210ENST00000428307 AGAP6Q5VW22 663 aa9.25□□□□□ -0.93
HDAC9-210ENST00000428307 MZT2BQ6NZ67 158 aa9.25□□□□□ -0.93
HDAC9-210ENST00000428307 RNF133Q8WVZ7 376 aa9.25□□□□□ -0.93
HDAC9-210ENST00000428307 ASB5Q8WWX0 329 aa9.25□□□□□ -0.93
HDAC9-210ENST00000428307 ADAMTS14Q8WXS8 1223 aa9.25□□□□□ -0.93
HDAC9-210ENST00000428307 GCDHQ92947 438 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-210ENST00000428307 NTNG2Q96CW9 530 aa9.25□□□□□ -0.93
HDAC9-210ENST00000428307 AGAP4Q96P64 663 aa9.25□□□□□ -0.93
HDAC9-210ENST00000428307 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.25□□□□□ -0.93
HDAC9-210ENST00000428307 ABCG5Q9H222 651 aa9.25□□□□□ -0.93
HDAC9-210ENST00000428307 LRFN1Q9P244 771 aa9.25□□□□□ -0.93
HDAC9-210ENST00000428307 ASH2LQ9UBL3 628 aa9.25□□□□□ -0.93
HDAC9-210ENST00000428307 OR52A1Q9UKL2 312 aa9.25□□□□□ -0.93
HDAC9-210ENST00000428307 DHDHQ9UQ10 334 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms