RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 BEX5Q5H9J7 111 aa6.45□□□□□ -1.38
LINC01049-201ENST00000426840 NCMAPQ5T1S8 102 aa6.45□□□□□ -1.38
LINC01049-201ENST00000426840 FAM27BQ5VT28 67 aa6.45□□□□□ -1.38
LINC01049-201ENST00000426840 SLC27A4Q6P1M0 643 aa6.45□□□□□ -1.38
LINC01049-201ENST00000426840 UGT2A3Q6UWM9 527 aa6.45□□□□□ -1.38
LINC01049-201ENST00000426840 ZBTB46Q86UZ6 589 aa6.45□□□□□ -1.38
LINC01049-201ENST00000426840 JAZF1Q86VZ6 243 aa6.45□□□□□ -1.38
LINC01049-201ENST00000426840 CCDC36Q8IYA8 594 aa6.45□□□□□ -1.38
LINC01049-201ENST00000426840 CBR4Q8N4T8 237 aa6.45□□□□□ -1.38
LINC01049-201ENST00000426840 FAM169BQ8N8A8 192 aa6.45□□□□□ -1.38
LINC01049-201ENST00000426840 CYB561A3Q8NBI2 242 aa6.45□□□□□ -1.38
LINC01049-201ENST00000426840 SDR9C7Q8NEX9 313 aa6.45□□□□□ -1.38
LINC01049-201ENST00000426840 TEX47Q8TBZ9 253 aa6.45□□□□□ -1.38
LINC01049-201ENST00000426840 RBM4BQ9BQ04 359 aaKnown RBP6.45□□□□□ -1.38
LINC01049-201ENST00000426840 TMEM204Q9BSN7 226 aa6.45□□□□□ -1.38
LINC01049-201ENST00000426840 RBM4Q9BWF3 364 aaKnown RBP6.45□□□□□ -1.38
LINC01049-201ENST00000426840 NOX3Q9HBY0 568 aa6.45□□□□□ -1.38
LINC01049-201ENST00000426840 CMC2Q9NRP2 79 aa6.45□□□□□ -1.38
LINC01049-201ENST00000426840 RASSF1Q9NS23 344 aa6.45□□□□□ -1.38
LINC01049-201ENST00000426840 KRT84Q9NSB2 600 aa6.45□□□□□ -1.38
LINC01049-201ENST00000426840 KIF17Q9P2E2 1029 aa6.45□□□□□ -1.38
LINC01049-201ENST00000426840 CRNNQ9UBG3 495 aaPredicted RBP6.45□□□□□ -1.38
LINC01049-201ENST00000426840 KLHL21Q9UJP4 597 aa6.45□□□□□ -1.38
LINC01049-201ENST00000426840 COA3Q9Y2R0 106 aaPredicted RBP6.45□□□□□ -1.38
LINC01049-201ENST00000426840 FKBP7Q9Y680 259 aa6.45□□□□□ -1.38
LINC01049-201ENST00000426840 UTP20O75691 2785 aaKnown RBP6.45□□□□□ -1.38
LINC01049-201ENST00000426840 ROS1P08922 2347 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 IGHV1-18A0A0C4DH31 117 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 FAM171A2A8MVW0 826 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 DLGAP1O14490 977 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 EI24O14681 340 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 SURF4O15260 269 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 GPANK1O95872 356 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 PLAUP00749 431 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 IGKV3-15P01624 115 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 IGLV1-44P01699 117 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 TFP02787 698 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 HMGN1P05114 100 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 MMP7P09237 267 aaPredicted RBP6.44□□□□□ -1.38
LINC01049-201ENST00000426840 CLUP10909 449 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 IGFBP5P24593 272 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 PTAFRP25105 342 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 CRABP1P29762 137 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 SSTR2P30874 369 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 ZNF83P51522 516 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 ALDH3A2P51648 485 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 SLC25A1P53007 311 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 KRTAP10-9P60411 292 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 PIGFQ07326 219 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 NPRL3Q12980 569 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 ENDOGQ14249 297 aaKnown RBP6.44□□□□□ -1.38
LINC01049-201ENST00000426840 RCN1Q15293 331 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 C3orf36Q3SXR2 165 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 SLX4IPQ5VYV7 408 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 OTPQ5XKR4 325 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 LPCAT4Q643R3 524 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 C12orf73Q69YU5 71 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 ZBTB49Q6ZSB9 765 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 SLC16A14Q7RTX9 510 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 MDP1Q86V88 176 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 LRRC18Q8N456 261 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 LILRB1Q8NHL6 650 aaPredicted RBP6.44□□□□□ -1.38
LINC01049-201ENST00000426840 FBXO17Q96EF6 278 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 PIK3IP1Q96FE7 263 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 FOXN4Q96NZ1 517 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 C9orf16Q9BUW7 83 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 HCAR1Q9BXC0 346 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 GABARAPL3Q9BY60 117 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 FN3KQ9H479 309 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 RERGLQ9H628 205 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 DCLRE1BQ9H816 532 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 SEC61A2Q9H9S3 476 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 NGBQ9NPG2 151 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 RPRD1BQ9NQG5 326 aaKnown RBP6.44□□□□□ -1.38
LINC01049-201ENST00000426840 POLE4Q9NR33 117 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 TVP23BQ9NYZ1 205 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 NKX1-2Q9UD57 310 aaPredicted RBP6.44□□□□□ -1.38
LINC01049-201ENST00000426840 ADGRG4Q8IZF6 3080 aa6.44□□□□□ -1.38
LINC01049-201ENST00000426840 NBPF19A0A087WUL8 3843 aa6.43□□□□□ -1.38
LINC01049-201ENST00000426840 A0A1W2PPL8 197 aa6.43□□□□□ -1.38
LINC01049-201ENST00000426840 FAM183AA6NL82 134 aa6.43□□□□□ -1.38
LINC01049-201ENST00000426840 CYSRT1A8MQ03 144 aa6.43□□□□□ -1.38
LINC01049-201ENST00000426840 M0R1B8 84 aa6.43□□□□□ -1.38
LINC01049-201ENST00000426840 CASQ2O14958 399 aaPredicted RBP6.43□□□□□ -1.38
LINC01049-201ENST00000426840 UBL3O95164 117 aa6.43□□□□□ -1.38
LINC01049-201ENST00000426840 FARS2O95363 451 aaKnown RBP6.43□□□□□ -1.38
LINC01049-201ENST00000426840 IFNGP01579 166 aa6.43□□□□□ -1.38
LINC01049-201ENST00000426840 RNASE1P07998 156 aaKnown RBP6.43□□□□□ -1.38
LINC01049-201ENST00000426840 CELA3BP08861 270 aa6.43□□□□□ -1.38
LINC01049-201ENST00000426840 CST2P09228 141 aa6.43□□□□□ -1.38
LINC01049-201ENST00000426840 GAAP10253 952 aa6.43□□□□□ -1.38
LINC01049-201ENST00000426840 CD79AP11912 226 aa6.43□□□□□ -1.38
LINC01049-201ENST00000426840 ZNF14P17017 642 aaPredicted RBP6.43□□□□□ -1.38
LINC01049-201ENST00000426840 ZNF32P17041 273 aa6.43□□□□□ -1.38
LINC01049-201ENST00000426840 SPI1P17947 270 aa6.43□□□□□ -1.38
LINC01049-201ENST00000426840 MSR1P21757 451 aa6.43□□□□□ -1.38
LINC01049-201ENST00000426840 CD40P25942 277 aa6.43□□□□□ -1.38
LINC01049-201ENST00000426840 HOXC12P31275 282 aa6.43□□□□□ -1.38
LINC01049-201ENST00000426840 PYCR1P32322 319 aa6.43□□□□□ -1.38
LINC01049-201ENST00000426840 ARR3P36575 388 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms