RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 SDF2Q99470 211 aa16.42■□□□□ 0.22
ARHGEF28-203ENST00000426542 UFSP2Q9NUQ7 469 aa16.42■□□□□ 0.22
ARHGEF28-203ENST00000426542 TCRBV5S1A1TA0A578 114 aa16.42■□□□□ 0.22
ARHGEF28-203ENST00000426542 HPNP05981 417 aa16.42■□□□□ 0.22
ARHGEF28-203ENST00000426542 HMGA1P17096 107 aaKnown RBP16.42■□□□□ 0.22
ARHGEF28-203ENST00000426542 RPS19P39019 145 aaKnown RBP16.42■□□□□ 0.22
ARHGEF28-203ENST00000426542 KHDC1LQ5JSQ8 128 aa16.42■□□□□ 0.22
ARHGEF28-203ENST00000426542 YOD1Q5VVQ6 348 aaPredicted RBP16.42■□□□□ 0.22
ARHGEF28-203ENST00000426542 SLC51BQ86UW2 128 aa16.42■□□□□ 0.22
ARHGEF28-203ENST00000426542 C19orf53Q9UNZ5 99 aaPredicted RBP16.42■□□□□ 0.22
ARHGEF28-203ENST00000426542 OR51B4Q9Y5P0 310 aa16.42■□□□□ 0.22
ARHGEF28-203ENST00000426542 NUP98P52948 1817 aa16.42■□□□□ 0.22
ARHGEF28-203ENST00000426542 MICAL3Q7RTP6 2002 aa16.42■□□□□ 0.22
ARHGEF28-203ENST00000426542 SYT6Q5T7P8 510 aaPredicted RBP16.42■□□□□ 0.22
ARHGEF28-203ENST00000426542 TMEM99Q8N816 258 aa16.42■□□□□ 0.22
ARHGEF28-203ENST00000426542 PATE1Q8WXA2 126 aa16.42■□□□□ 0.22
ARHGEF28-203ENST00000426542 CRYM-AS1A6NIL9 109 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 OR13C7P0DN81 318 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 SYT14P1Q58G82 188 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 TMUB2Q71RG4 321 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 SLC25A21Q9BQT8 299 aaPredicted RBP16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 TAF9BQ9HBM6 251 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 ZNF816-ZNF321PA0A0X1KG74 233 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 LOC107986453A0A1B0GWG9 222 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 B4GALT3O60512 393 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 PLPP6Q8IY26 295 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 ZNF321PQ8N8H1 164 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 MZB1Q8WU39 189 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 TRIB1Q96RU8 372 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 SLC2A10O95528 541 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 RBP2P50120 134 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 CORO6Q6QEF8 472 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 DLEU7Q6UYE1 221 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 TIMD4Q96H15 378 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 ZNF346Q9UL40 294 aaKnown RBP16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 NDRG4Q9ULP0 352 aaKnown RBP16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 PPP1R3CQ9UQK1 317 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 DFFBO76075 338 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 NDUFA6P56556 154 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 VWA2Q5GFL6 755 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 XKR7Q5GH72 579 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 DHRS4L2Q6PKH6 230 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 OR6K3Q8NGY3 331 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 OR2G3Q8NGZ4 309 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 SLAMF6Q96DU3 332 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 RIMS4Q9H426 269 aaPredicted RBP16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 ATP23Q9Y6H3 246 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 IGHV3-64DA0A0J9YX35 117 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 GLAP06280 429 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 LYSMD2Q8IV50 215 aa16.41■□□□□ 0.22
ARHGEF28-203ENST00000426542 NID1P14543 1247 aa16.4■□□□□ 0.22
ARHGEF28-203ENST00000426542 HIST1H1CP16403 213 aaKnown RBP16.4■□□□□ 0.22
ARHGEF28-203ENST00000426542 OR1M1Q8NGA1 313 aa16.4■□□□□ 0.22
ARHGEF28-203ENST00000426542 OR10R2Q8NGX6 335 aa16.4■□□□□ 0.22
ARHGEF28-203ENST00000426542 OR51F2Q8NH61 342 aa16.4■□□□□ 0.22
ARHGEF28-203ENST00000426542 CHRM2P08172 466 aa16.4■□□□□ 0.22
ARHGEF28-203ENST00000426542 SLC35A2P78381 396 aa16.4■□□□□ 0.22
ARHGEF28-203ENST00000426542 PRAMEF5Q5TYX0 476 aa16.4■□□□□ 0.22
ARHGEF28-203ENST00000426542 PRAMEF6Q5VXH4 476 aa16.4■□□□□ 0.22
ARHGEF28-203ENST00000426542 SLC35B4Q969S0 331 aa16.4■□□□□ 0.22
ARHGEF28-203ENST00000426542 A0A1W2PNR3 127 aa16.4■□□□□ 0.22
ARHGEF28-203ENST00000426542 RAB19A4D1S5 217 aa16.4■□□□□ 0.22
ARHGEF28-203ENST00000426542 TMEM200CA6NKL6 621 aa16.4■□□□□ 0.22
ARHGEF28-203ENST00000426542 ARNTP27540 789 aa16.4■□□□□ 0.22
ARHGEF28-203ENST00000426542 LIPNQ5VXI9 398 aa16.4■□□□□ 0.22
ARHGEF28-203ENST00000426542 ZCCHC4Q9H5U6 513 aa16.4■□□□□ 0.22
ARHGEF28-203ENST00000426542 MMP17Q9ULZ9 603 aa16.4■□□□□ 0.22
ARHGEF28-203ENST00000426542 FGF17O60258 216 aa16.4■□□□□ 0.22
ARHGEF28-203ENST00000426542 IGFBP1P08833 259 aaPredicted RBP16.4■□□□□ 0.22
ARHGEF28-203ENST00000426542 FKBP2P26885 142 aaKnown RBP16.4■□□□□ 0.22
ARHGEF28-203ENST00000426542 FCRL6Q6DN72 434 aa16.4■□□□□ 0.22
ARHGEF28-203ENST00000426542 TMEM200AQ86VY9 491 aa16.4■□□□□ 0.22
ARHGEF28-203ENST00000426542 SFT2D1Q8WV19 159 aa16.4■□□□□ 0.22
ARHGEF28-203ENST00000426542 C8orf44Q96CB5 159 aa16.4■□□□□ 0.22
ARHGEF28-203ENST00000426542 PARP12Q9H0J9 701 aaKnown RBP16.4■□□□□ 0.22
ARHGEF28-203ENST00000426542 ACER3Q9NUN7 267 aa16.4■□□□□ 0.22
ARHGEF28-203ENST00000426542 TIMM10BQ9Y5J6 103 aa16.4■□□□□ 0.22
ARHGEF28-203ENST00000426542 ICOSLGO75144 302 aa16.39■□□□□ 0.22
ARHGEF28-203ENST00000426542 SBK2P0C263 348 aa16.39■□□□□ 0.22
ARHGEF28-203ENST00000426542 RAB13P51153 203 aa16.39■□□□□ 0.22
ARHGEF28-203ENST00000426542 FLI1Q01543 452 aaPredicted RBP16.39■□□□□ 0.22
ARHGEF28-203ENST00000426542 SHHQ15465 462 aa16.39■□□□□ 0.22
ARHGEF28-203ENST00000426542 TFAP2EQ6VUC0 442 aa16.39■□□□□ 0.22
ARHGEF28-203ENST00000426542 CTSFQ9UBX1 484 aa16.39■□□□□ 0.22
ARHGEF28-203ENST00000426542 EXO1Q9UQ84 846 aaKnown RBP16.39■□□□□ 0.22
ARHGEF28-203ENST00000426542 CHST2Q9Y4C5 530 aa16.39■□□□□ 0.22
ARHGEF28-203ENST00000426542 SLCO1B1Q9Y6L6 691 aa16.39■□□□□ 0.22
ARHGEF28-203ENST00000426542 MYH4Q9Y623 1939 aa16.39■□□□□ 0.22
ARHGEF28-203ENST00000426542 BTBD17A6NE02 478 aa16.39■□□□□ 0.21
ARHGEF28-203ENST00000426542 TBPP20226 339 aa16.39■□□□□ 0.21
ARHGEF28-203ENST00000426542 TBXA2RP21731 343 aa16.39■□□□□ 0.21
ARHGEF28-203ENST00000426542 RFX2P48378 723 aa16.39■□□□□ 0.21
ARHGEF28-203ENST00000426542 SUB1P53999 127 aaKnown RBP eCLIP16.39■□□□□ 0.21
ARHGEF28-203ENST00000426542 TMEM182Q6ZP80 229 aaPredicted RBP16.39■□□□□ 0.21
ARHGEF28-203ENST00000426542 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.39■□□□□ 0.21
ARHGEF28-203ENST00000426542 SKA3Q8IX90 412 aa16.39■□□□□ 0.21
ARHGEF28-203ENST00000426542 FN3KRPQ9HA64 309 aa16.39■□□□□ 0.21
ARHGEF28-203ENST00000426542 UGT2A1Q9Y4X1 527 aa16.39■□□□□ 0.21
ARHGEF28-203ENST00000426542 ANKRD12Q6UB98 2062 aa16.39■□□□□ 0.21
ARHGEF28-203ENST00000426542 RGPD5Q99666 1765 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms