RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 SMURF1Q9HCE7 757 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 PAQR5Q9NXK6 330 aaPredicted RBP13.48□□□□□ -0.25
ACTB-204ENST00000425660 KLK13Q9UKR3 277 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 UGT2A1Q9Y4X1 527 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 CSAG2Q9Y5P2 127 aa13.48□□□□□ -0.25
ACTB-204ENST00000425660 KIAA1549Q9HCM3 1950 aa13.47□□□□□ -0.25
ACTB-204ENST00000425660 LAMA5O15230 3695 aa13.47□□□□□ -0.25
ACTB-204ENST00000425660 ARPC4-TTLL3A0A0A6YYG9 625 aa13.47□□□□□ -0.25
ACTB-204ENST00000425660 TMEM212A6NML5 194 aa13.47□□□□□ -0.25
ACTB-204ENST00000425660 ACOT7O00154 380 aa13.47□□□□□ -0.25
ACTB-204ENST00000425660 TAF4O00268 1085 aa13.47□□□□□ -0.25
ACTB-204ENST00000425660 CTDSP2O14595 271 aa13.47□□□□□ -0.25
ACTB-204ENST00000425660 ARL6IP5O75915 188 aa13.47□□□□□ -0.25
ACTB-204ENST00000425660 ACTL6AO96019 429 aa13.47□□□□□ -0.25
ACTB-204ENST00000425660 SELENOPP49908 381 aa13.47□□□□□ -0.25
ACTB-204ENST00000425660 SLC10A1Q14973 349 aa13.47□□□□□ -0.25
ACTB-204ENST00000425660 INAQ16352 499 aa13.47□□□□□ -0.25
ACTB-204ENST00000425660 KRT77Q7Z794 578 aa13.47□□□□□ -0.25
ACTB-204ENST00000425660 NR2C2APQ86WQ0 139 aa13.47□□□□□ -0.25
ACTB-204ENST00000425660 C20orf196Q8IYI0 205 aa13.47□□□□□ -0.25
ACTB-204ENST00000425660 PRSS35Q8N3Z0 413 aa13.47□□□□□ -0.25
ACTB-204ENST00000425660 OR10H5Q8NGA6 315 aa13.47□□□□□ -0.25
ACTB-204ENST00000425660 OR5AK2Q8NH90 309 aa13.47□□□□□ -0.25
ACTB-204ENST00000425660 PNPLA2Q96AD5 504 aa13.47□□□□□ -0.25
ACTB-204ENST00000425660 ZNF845Q96IR2 970 aaPredicted RBP13.47□□□□□ -0.25
ACTB-204ENST00000425660 C4orf45Q96LM5 186 aa13.47□□□□□ -0.25
ACTB-204ENST00000425660 WDFY2Q96P53 400 aa13.47□□□□□ -0.25
ACTB-204ENST00000425660 SMAD5Q99717 465 aaKnown RBP13.47□□□□□ -0.25
ACTB-204ENST00000425660 KCNS3Q9BQ31 491 aa13.47□□□□□ -0.25
ACTB-204ENST00000425660 LRP12Q9Y561 859 aa13.47□□□□□ -0.25
ACTB-204ENST00000425660 IGKV3D-15A0A087WSY6 115 aa13.46□□□□□ -0.25
ACTB-204ENST00000425660 J3QRK9 145 aa13.46□□□□□ -0.25
ACTB-204ENST00000425660 SRSF10O75494 262 aaKnown RBP13.46□□□□□ -0.25
ACTB-204ENST00000425660 PLA2G5P39877 138 aa13.46□□□□□ -0.25
ACTB-204ENST00000425660 RIDAP52758 137 aaKnown RBP13.46□□□□□ -0.25
ACTB-204ENST00000425660 ZNF45Q02386 682 aa13.46□□□□□ -0.25
ACTB-204ENST00000425660 PHYHD1Q5SRE7 291 aa13.46□□□□□ -0.25
ACTB-204ENST00000425660 FCRLAQ7L513 359 aa13.46□□□□□ -0.25
ACTB-204ENST00000425660 BTLAQ7Z6A9 289 aa13.46□□□□□ -0.25
ACTB-204ENST00000425660 CCDC190Q86UF4 302 aa13.46□□□□□ -0.25
ACTB-204ENST00000425660 OR6N1Q8NGY5 312 aa13.46□□□□□ -0.25
ACTB-204ENST00000425660 ROBO4Q8WZ75 1007 aa13.46□□□□□ -0.25
ACTB-204ENST00000425660 ABTB1Q969K4 478 aaPredicted RBP13.46□□□□□ -0.25
ACTB-204ENST00000425660 OR14A2Q96R54 314 aa13.46□□□□□ -0.25
ACTB-204ENST00000425660 POLE4Q9NR33 117 aa13.46□□□□□ -0.25
ACTB-204ENST00000425660 WASF3Q9UPY6 502 aa13.46□□□□□ -0.25
ACTB-204ENST00000425660 B3GNT3Q9Y2A9 372 aa13.46□□□□□ -0.25
ACTB-204ENST00000425660 SSUH2Q9Y2M2 353 aa13.46□□□□□ -0.25
ACTB-204ENST00000425660 LHFPL6Q9Y693 200 aa13.46□□□□□ -0.25
ACTB-204ENST00000425660 TRBV5-5A0A0J9YX44 114 aa13.46□□□□□ -0.26
ACTB-204ENST00000425660 A0A1W2PPL8 197 aa13.46□□□□□ -0.26
ACTB-204ENST00000425660 ZNF879B4DU55 563 aa13.46□□□□□ -0.26
ACTB-204ENST00000425660 MYL9P24844 172 aa13.46□□□□□ -0.26
ACTB-204ENST00000425660 CD40LGP29965 261 aa13.46□□□□□ -0.26
ACTB-204ENST00000425660 CDAP32320 146 aa13.46□□□□□ -0.26
ACTB-204ENST00000425660 DCTDP32321 178 aa13.46□□□□□ -0.26
ACTB-204ENST00000425660 NTF4P34130 210 aa13.46□□□□□ -0.26
ACTB-204ENST00000425660 LSM6P62312 80 aaKnown RBP13.46□□□□□ -0.26
ACTB-204ENST00000425660 WDR38Q5JTN6 314 aa13.46□□□□□ -0.26
ACTB-204ENST00000425660 RNFT1Q5M7Z0 435 aa13.46□□□□□ -0.26
ACTB-204ENST00000425660 LINC00346Q8IVM7 164 aa13.46□□□□□ -0.26
ACTB-204ENST00000425660 MEIOBQ8N635 442 aa13.46□□□□□ -0.26
ACTB-204ENST00000425660 C1orf198Q9H425 327 aa13.46□□□□□ -0.26
ACTB-204ENST00000425660 A0A087WV48 116 aa13.45□□□□□ -0.26
ACTB-204ENST00000425660 TRAV17A0A0B4J275 112 aa13.45□□□□□ -0.26
ACTB-204ENST00000425660 A0A1B0GTH9 108 aa13.45□□□□□ -0.26
ACTB-204ENST00000425660 PNPP00491 289 aa13.45□□□□□ -0.26
ACTB-204ENST00000425660 SDHBP21912 280 aa13.45□□□□□ -0.26
ACTB-204ENST00000425660 KIR3DL2P43630 455 aa13.45□□□□□ -0.26
ACTB-204ENST00000425660 PPP5CP53041 499 aa13.45□□□□□ -0.26
ACTB-204ENST00000425660 CAV3P56539 151 aa13.45□□□□□ -0.26
ACTB-204ENST00000425660 FOXC1Q12948 553 aa13.45□□□□□ -0.26
ACTB-204ENST00000425660 Q499Y3 187 aa13.45□□□□□ -0.26
ACTB-204ENST00000425660 OR7E24Q6IFN5 339 aa13.45□□□□□ -0.26
ACTB-204ENST00000425660 CORO6Q6QEF8 472 aa13.45□□□□□ -0.26
ACTB-204ENST00000425660 IL17RDQ8NFM7 739 aa13.45□□□□□ -0.26
ACTB-204ENST00000425660 TMEM45BQ96B21 275 aa13.45□□□□□ -0.26
ACTB-204ENST00000425660 DERL3Q96Q80 235 aa13.45□□□□□ -0.26
ACTB-204ENST00000425660 COMMD4Q9H0A8 199 aa13.45□□□□□ -0.26
ACTB-204ENST00000425660 SEC61A2Q9H9S3 476 aa13.45□□□□□ -0.26
ACTB-204ENST00000425660 SMIM30A4D0T7 59 aa13.44□□□□□ -0.26
ACTB-204ENST00000425660 PIN1P1O15428 100 aa13.44□□□□□ -0.26
ACTB-204ENST00000425660 KLK10O43240 276 aa13.44□□□□□ -0.26
ACTB-204ENST00000425660 DHHO43323 396 aa13.44□□□□□ -0.26
ACTB-204ENST00000425660 ITGB2P05107 769 aa13.44□□□□□ -0.26
ACTB-204ENST00000425660 MMP16P51512 607 aa13.44□□□□□ -0.26
ACTB-204ENST00000425660 RIPPLY2Q5TAB7 128 aa13.44□□□□□ -0.26
ACTB-204ENST00000425660 IGFL3Q6UXB1 125 aa13.44□□□□□ -0.26
ACTB-204ENST00000425660 OR10S1Q8NGN2 331 aa13.44□□□□□ -0.26
ACTB-204ENST00000425660 ABHD3Q8WU67 409 aa13.44□□□□□ -0.26
ACTB-204ENST00000425660 NABP1Q96AH0 204 aa13.44□□□□□ -0.26
ACTB-204ENST00000425660 SLAMF6Q96DU3 332 aa13.44□□□□□ -0.26
ACTB-204ENST00000425660 ATF6BQ99941 703 aa13.44□□□□□ -0.26
ACTB-204ENST00000425660 NELFAQ9H3P2 528 aa13.44□□□□□ -0.26
ACTB-204ENST00000425660 ZCCHC4Q9H5U6 513 aa13.44□□□□□ -0.26
ACTB-204ENST00000425660 GDF2Q9UK05 429 aaPredicted RBP13.44□□□□□ -0.26
ACTB-204ENST00000425660 LIPGQ9Y5X9 500 aa13.44□□□□□ -0.26
ACTB-204ENST00000425660 R4GMQ9 66 aa13.44□□□□□ -0.26
ACTB-204ENST00000425660 A0A0G2JK05 382 aa13.43□□□□□ -0.26
ACTB-204ENST00000425660 GPR171O14626 319 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms