RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 SURF2Q15527 256 aaPredicted RBP10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 Q499Y3 187 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 DMRTC1Q5HYR2 192 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 TMEM215Q68D42 235 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 RPL7L1Q6DKI1 246 aaKnown RBP10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 UNQ9370/PRO34162Q6UXP9 181 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 GAREM2Q75VX8 874 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 PARGQ86W56 976 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 ZNF563Q8TA94 476 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 CCDC107Q8WV48 283 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 TSEN15Q8WW01 171 aaKnown RBP10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 SEH1LQ96EE3 360 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 ADAD1Q96M93 576 aaKnown RBP10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 LGR4Q9BXB1 951 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 PPP4R1LQ9P1A2 415 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 YIPF1Q9Y548 306 aa10.22□□□□□ -0.77
SEC61A1-202ENST00000424880 MTCL1Q9Y4B5 1905 aaKnown RBP10.21□□□□□ -0.77
SEC61A1-202ENST00000424880 GRXCR1A8MXD5 290 aa10.21□□□□□ -0.77
SEC61A1-202ENST00000424880 AP4M1O00189 453 aa10.21□□□□□ -0.77
SEC61A1-202ENST00000424880 IFNA2P01563 188 aa10.21□□□□□ -0.77
SEC61A1-202ENST00000424880 GSK3AP49840 483 aa10.21□□□□□ -0.77
SEC61A1-202ENST00000424880 RNF4P78317 190 aa10.21□□□□□ -0.77
SEC61A1-202ENST00000424880 MEF2DQ14814 521 aa10.21□□□□□ -0.77
SEC61A1-202ENST00000424880 SLC9A3R2Q15599 337 aa10.21□□□□□ -0.77
SEC61A1-202ENST00000424880 NNATQ16517 81 aa10.21□□□□□ -0.77
SEC61A1-202ENST00000424880 CDCP2Q5VXM1 449 aa10.21□□□□□ -0.77
SEC61A1-202ENST00000424880 ANKRD33Q7Z3H0 272 aa10.21□□□□□ -0.77
SEC61A1-202ENST00000424880 GJD3Q8N144 294 aa10.21□□□□□ -0.77
SEC61A1-202ENST00000424880 RNF166Q96A37 237 aaPredicted RBP10.21□□□□□ -0.77
SEC61A1-202ENST00000424880 MESP1Q9BRJ9 268 aa10.21□□□□□ -0.77
SEC61A1-202ENST00000424880 TWSG1Q9GZX9 223 aa10.21□□□□□ -0.77
SEC61A1-202ENST00000424880 CYTL1Q9NRR1 136 aa10.21□□□□□ -0.77
SEC61A1-202ENST00000424880 FLRT3Q9NZU0 649 aa10.21□□□□□ -0.77
SEC61A1-202ENST00000424880 EML5Q05BV3 1969 aa10.21□□□□□ -0.77
SEC61A1-202ENST00000424880 A0A1B0GTI1 187 aa10.21□□□□□ -0.78
SEC61A1-202ENST00000424880 ZNF736B4DX44 427 aaPredicted RBP10.21□□□□□ -0.78
SEC61A1-202ENST00000424880 PRAMEF26H0Y7S4 382 aa10.21□□□□□ -0.78
SEC61A1-202ENST00000424880 CYB5AP00167 134 aa10.21□□□□□ -0.78
SEC61A1-202ENST00000424880 SNRPCP09234 159 aaKnown RBP10.21□□□□□ -0.78
SEC61A1-202ENST00000424880 NR2C1P13056 603 aa10.21□□□□□ -0.78
SEC61A1-202ENST00000424880 BCL6P41182 706 aa10.21□□□□□ -0.78
SEC61A1-202ENST00000424880 RBP2P50120 134 aa10.21□□□□□ -0.78
SEC61A1-202ENST00000424880 BTN3A2P78410 334 aa10.21□□□□□ -0.78
SEC61A1-202ENST00000424880 SRSF4Q08170 494 aaKnown RBP10.21□□□□□ -0.78
SEC61A1-202ENST00000424880 IRF4Q15306 451 aa10.21□□□□□ -0.78
SEC61A1-202ENST00000424880 ANKRD16Q6P6B7 361 aa10.21□□□□□ -0.78
SEC61A1-202ENST00000424880 DNM1P46Q6ZS02 220 aa10.21□□□□□ -0.78
SEC61A1-202ENST00000424880 SLC35D2Q76EJ3 337 aa10.21□□□□□ -0.78
SEC61A1-202ENST00000424880 ZNF227Q86WZ6 799 aa10.21□□□□□ -0.78
SEC61A1-202ENST00000424880 FAM3DQ96BQ1 224 aa10.21□□□□□ -0.78
SEC61A1-202ENST00000424880 KIRREL1Q96J84 757 aa10.21□□□□□ -0.78
SEC61A1-202ENST00000424880 ZNF587Q96SQ5 575 aaPredicted RBP10.21□□□□□ -0.78
SEC61A1-202ENST00000424880 SSX3Q99909 188 aa10.21□□□□□ -0.78
SEC61A1-202ENST00000424880 C2orf88Q9BSF0 95 aa10.21□□□□□ -0.78
SEC61A1-202ENST00000424880 TEX101Q9BY14 249 aa10.21□□□□□ -0.78
SEC61A1-202ENST00000424880 SYT4Q9H2B2 425 aa10.21□□□□□ -0.78
SEC61A1-202ENST00000424880 LPAR3Q9UBY5 353 aa10.21□□□□□ -0.78
SEC61A1-202ENST00000424880 PISDQ9UG56 409 aa10.21□□□□□ -0.78
SEC61A1-202ENST00000424880 CACFD1Q9UGQ2 172 aa10.21□□□□□ -0.78
SEC61A1-202ENST00000424880 FANCMQ8IYD8 2048 aa10.21□□□□□ -0.78
SEC61A1-202ENST00000424880 ZNF727A8MUV8 499 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 SOX15O60248 233 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 OR10H2O60403 315 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 MT-ND4LP03901 98 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 CALCBP10092 127 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 SLC25A4P12235 298 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 CPMP14384 443 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 EXOSC7Q15024 291 aaKnown RBP10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 DNLZQ5SXM8 178 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 OR2A2Q6IF42 318 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 TGIF2LXQ8IUE1 241 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 OR56A1Q8NGH5 318 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 RAB3CQ96E17 227 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 TAAR9Q96RI9 348 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 SDF2Q99470 211 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 SPACA1Q9HBV2 294 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 GDE1Q9NZC3 331 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 SLC22A13Q9Y226 551 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 COL4A6Q14031 1691 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 A0A1W2PRU2 124 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 NME2P1O60361 137 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 LDB3O75112 727 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 C1QL1O75973 258 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 F13BP05160 661 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 OR13C7P0DN81 318 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 HIST1H1TP22492 207 aaPredicted RBP10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 PSMB6P28072 239 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 CAV2P51636 162 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 S100A10P60903 97 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 CSNK1G2P78368 415 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 ILF3Q12906 894 aaKnown RBP eCLIP10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 KIAA0141Q14154 515 aaPredicted RBP10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 VWA2Q5GFL6 755 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 DPY19L4Q7Z388 723 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 ZCCHC10Q8TBK6 192 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 RNF126Q9BV68 326 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 POTEKPQ9BYX7 375 aa10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 EIF5A2Q9GZV4 153 aaKnown RBP10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 MTHFD2LQ9H903 347 aaPredicted RBP10.2□□□□□ -0.78
SEC61A1-202ENST00000424880 SLC25A13Q9UJS0 675 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms