RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 OR10H5Q8NGA6 315 aa22.72■■□□□ 1.23
CDK9-202ENST00000421939 OR52L1Q8NGH7 329 aa22.72■■□□□ 1.23
CDK9-202ENST00000421939 CANT1Q8WVQ1 401 aa22.72■■□□□ 1.23
CDK9-202ENST00000421939 POM121L2Q96KW2 1035 aa22.72■■□□□ 1.23
CDK9-202ENST00000421939 SNX18Q96RF0 628 aa22.72■■□□□ 1.23
CDK9-202ENST00000421939 SYT3Q9BQG1 590 aa22.72■■□□□ 1.23
CDK9-202ENST00000421939 WACQ9BTA9 647 aa22.72■■□□□ 1.23
CDK9-202ENST00000421939 NUAK2Q9H093 628 aa22.72■■□□□ 1.23
CDK9-202ENST00000421939 OR51B6Q9H340 312 aa22.72■■□□□ 1.23
CDK9-202ENST00000421939 EGLN3Q9H6Z9 239 aa22.72■■□□□ 1.23
CDK9-202ENST00000421939 COA3Q9Y2R0 106 aaPredicted RBP22.72■■□□□ 1.23
CDK9-202ENST00000421939 NSD1Q96L73 2696 aaPredicted RBP22.72■■□□□ 1.23
CDK9-202ENST00000421939 IGHV4-30-2A0A087WSY4 118 aa22.71■■□□□ 1.23
CDK9-202ENST00000421939 IDH3BO43837 385 aa22.71■■□□□ 1.23
CDK9-202ENST00000421939 GASTP01350 101 aa22.71■■□□□ 1.23
CDK9-202ENST00000421939 HIST1H1CP16403 213 aaKnown RBP22.71■■□□□ 1.23
CDK9-202ENST00000421939 HOXB6P17509 224 aaKnown RBP22.71■■□□□ 1.23
CDK9-202ENST00000421939 NOS3P29474 1203 aa22.71■■□□□ 1.23
CDK9-202ENST00000421939 GDI2P50395 445 aaKnown RBP22.71■■□□□ 1.23
CDK9-202ENST00000421939 MICAQ29983 383 aa22.71■■□□□ 1.23
CDK9-202ENST00000421939 RGS7BPQ6MZT1 257 aaPredicted RBP22.71■■□□□ 1.23
CDK9-202ENST00000421939 LEG1Q6P5S2 330 aa22.71■■□□□ 1.23
CDK9-202ENST00000421939 SPATA24Q86W54 205 aa22.71■■□□□ 1.23
CDK9-202ENST00000421939 ALDH16A1Q8IZ83 802 aa22.71■■□□□ 1.23
CDK9-202ENST00000421939 RAB1BQ9H0U4 201 aa22.71■■□□□ 1.23
CDK9-202ENST00000421939 FZR1Q9UM11 496 aa22.71■■□□□ 1.23
CDK9-202ENST00000421939 POMPQ9Y244 141 aa22.71■■□□□ 1.23
CDK9-202ENST00000421939 CSPG4Q6UVK1 2322 aa22.71■■□□□ 1.23
CDK9-202ENST00000421939 C5orf49A4QMS7 147 aa22.7■■□□□ 1.22
CDK9-202ENST00000421939 RENP00797 406 aa22.7■■□□□ 1.22
CDK9-202ENST00000421939 CST1P01037 141 aa22.7■■□□□ 1.22
CDK9-202ENST00000421939 HEXAP06865 529 aa22.7■■□□□ 1.22
CDK9-202ENST00000421939 CCNOP22674 350 aa22.7■■□□□ 1.22
CDK9-202ENST00000421939 CRABP1P29762 137 aa22.7■■□□□ 1.22
CDK9-202ENST00000421939 UCP2P55851 309 aa22.7■■□□□ 1.22
CDK9-202ENST00000421939 RIPPLY3P57055 190 aa22.7■■□□□ 1.22
CDK9-202ENST00000421939 SCRN3Q0VDG4 424 aa22.7■■□□□ 1.22
CDK9-202ENST00000421939 GK3PQ14409 553 aa22.7■■□□□ 1.22
CDK9-202ENST00000421939 CLEC12AQ5QGZ9 265 aa22.7■■□□□ 1.22
CDK9-202ENST00000421939 ZNF774Q6NX45 483 aa22.7■■□□□ 1.22
CDK9-202ENST00000421939 RASSF6Q6ZTQ3 369 aa22.7■■□□□ 1.22
CDK9-202ENST00000421939 OR4K13Q8NH42 304 aa22.7■■□□□ 1.22
CDK9-202ENST00000421939 FAM168AQ92567 244 aa22.7■■□□□ 1.22
CDK9-202ENST00000421939 TSSK2Q96PF2 358 aa22.7■■□□□ 1.22
CDK9-202ENST00000421939 NMNAT3Q96T66 252 aa22.7■■□□□ 1.22
CDK9-202ENST00000421939 CADM1Q9BY67 442 aaKnown RBP22.7■■□□□ 1.22
CDK9-202ENST00000421939 BCL2L14Q9BZR8 327 aa22.7■■□□□ 1.22
CDK9-202ENST00000421939 RTTNQ86VV8 2226 aa22.7■■□□□ 1.22
CDK9-202ENST00000421939 NIPBLQ6KC79 2804 aaeCLIP22.7■■□□□ 1.22
CDK9-202ENST00000421939 LOC100509620A0A075B734 347 aa22.69■■□□□ 1.22
CDK9-202ENST00000421939 M0R233 179 aa22.69■■□□□ 1.22
CDK9-202ENST00000421939 SYNGR3O43761 229 aa22.69■■□□□ 1.22
CDK9-202ENST00000421939 LY6G6DO95868 133 aa22.69■■□□□ 1.22
CDK9-202ENST00000421939 LCKP06239 509 aa22.69■■□□□ 1.22
CDK9-202ENST00000421939 ERCC1P07992 297 aaPredicted RBP22.69■■□□□ 1.22
CDK9-202ENST00000421939 RAD52P43351 418 aa22.69■■□□□ 1.22
CDK9-202ENST00000421939 LRP11Q86VZ4 500 aa22.69■■□□□ 1.22
CDK9-202ENST00000421939 MAPK1IP1LQ8NDC0 245 aa22.69■■□□□ 1.22
CDK9-202ENST00000421939 OR10G2Q8NGC3 310 aa22.69■■□□□ 1.22
CDK9-202ENST00000421939 DGCR6LQ9BY27 220 aa22.69■■□□□ 1.22
CDK9-202ENST00000421939 PLA2G12AQ9BZM1 189 aa22.69■■□□□ 1.22
CDK9-202ENST00000421939 IL20Q9NYY1 176 aa22.69■■□□□ 1.22
CDK9-202ENST00000421939 IGLV1-36A0A0B4J1U3 117 aa22.68■■□□□ 1.22
CDK9-202ENST00000421939 DCTN6O00399 190 aa22.68■■□□□ 1.22
CDK9-202ENST00000421939 GSC2O15499 205 aa22.68■■□□□ 1.22
CDK9-202ENST00000421939 MPZL1O95297 269 aa22.68■■□□□ 1.22
CDK9-202ENST00000421939 IGFBP1P08833 259 aaPredicted RBP22.68■■□□□ 1.22
CDK9-202ENST00000421939 ADRA2AP08913 450 aa22.68■■□□□ 1.22
CDK9-202ENST00000421939 ERVS71-1P61550 626 aa22.68■■□□□ 1.22
CDK9-202ENST00000421939 LSM6P62312 80 aaKnown RBP22.68■■□□□ 1.22
CDK9-202ENST00000421939 AQP6Q13520 282 aa22.68■■□□□ 1.22
CDK9-202ENST00000421939 OTPQ5XKR4 325 aa22.68■■□□□ 1.22
CDK9-202ENST00000421939 Q71RC1 249 aaPredicted RBP22.68■■□□□ 1.22
CDK9-202ENST00000421939 ZCCHC24Q8N2G6 241 aaKnown RBP22.68■■□□□ 1.22
CDK9-202ENST00000421939 SDR9C7Q8NEX9 313 aa22.68■■□□□ 1.22
CDK9-202ENST00000421939 OR8D4Q8NGM9 314 aa22.68■■□□□ 1.22
CDK9-202ENST00000421939 C10orf105Q8TEF2 133 aa22.68■■□□□ 1.22
CDK9-202ENST00000421939 C11orf40Q8WZ69 217 aa22.68■■□□□ 1.22
CDK9-202ENST00000421939 RACGAP1Q9H0H5 632 aa22.68■■□□□ 1.22
CDK9-202ENST00000421939 TBC1D23Q9NUY8 699 aa22.68■■□□□ 1.22
CDK9-202ENST00000421939 MYEF2Q9P2K5 600 aaKnown RBP22.68■■□□□ 1.22
CDK9-202ENST00000421939 DUSP13Q9UII6 198 aa22.68■■□□□ 1.22
CDK9-202ENST00000421939 A0A1W2PPW3 197 aa22.67■■□□□ 1.22
CDK9-202ENST00000421939 TCRBV3S1A0A5B6 114 aa22.67■■□□□ 1.22
CDK9-202ENST00000421939 BHLHE40O14503 412 aa22.67■■□□□ 1.22
CDK9-202ENST00000421939 DOK2O60496 412 aa22.67■■□□□ 1.22
CDK9-202ENST00000421939 GAAP10253 952 aa22.67■■□□□ 1.22
CDK9-202ENST00000421939 GSTM3P21266 225 aa22.67■■□□□ 1.22
CDK9-202ENST00000421939 WNT5AP41221 380 aa22.67■■□□□ 1.22
CDK9-202ENST00000421939 CENPAP49450 140 aa22.67■■□□□ 1.22
CDK9-202ENST00000421939 PDLIM4P50479 330 aa22.67■■□□□ 1.22
CDK9-202ENST00000421939 RASSF2P50749 326 aa22.67■■□□□ 1.22
CDK9-202ENST00000421939 SLC35F1Q5T1Q4 408 aa22.67■■□□□ 1.22
CDK9-202ENST00000421939 ZNF101Q8IZC7 436 aa22.67■■□□□ 1.22
CDK9-202ENST00000421939 OR6V1Q8N148 313 aa22.67■■□□□ 1.22
CDK9-202ENST00000421939 ICA1LQ8NDH6 482 aa22.67■■□□□ 1.22
CDK9-202ENST00000421939 NEU4Q8WWR8 484 aaPredicted RBP22.67■■□□□ 1.22
CDK9-202ENST00000421939 MYOZ1Q9NP98 299 aaPredicted RBP22.67■■□□□ 1.22
CDK9-202ENST00000421939 RPRD1BQ9NQG5 326 aaKnown RBP22.67■■□□□ 1.22
CDK9-202ENST00000421939 ASH2LQ9UBL3 628 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms