RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 HIST1H2ACQ93077 130 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 ZNF566Q969W8 418 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 FAM162AQ96A26 154 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 SGTBQ96EQ0 304 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 LRR1Q96L50 414 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 ADAD1Q96M93 576 aaKnown RBP6.01□□□□□ -1.45
HMGN1-205ENST00000419378 SLC38A2Q96QD8 506 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 KRTAP3-1Q9BYR8 98 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 ULBP2Q9BZM5 246 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 B3GAT2Q9NPZ5 323 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 MAN2C1Q9NTJ4 1040 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 ZNF701Q9NV72 531 aaPredicted RBP6.01□□□□□ -1.45
HMGN1-205ENST00000419378 ARL8BQ9NVJ2 186 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 TAS2R5Q9NYW4 299 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 CISD1Q9NZ45 108 aaKnown RBP6.01□□□□□ -1.45
HMGN1-205ENST00000419378 ADA2Q9NZK5 511 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 RHCGQ9UBD6 479 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 MED31Q9Y3C7 131 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 C2CD3Q4AC94 2353 aa6.01□□□□□ -1.45
HMGN1-205ENST00000419378 IGHV1-18A0A0C4DH31 117 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 LOC102723971A0A1B0GUV8 181 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 ZNF726A6NNF4 738 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 OVOL3O00110 214 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 RAB27BO00194 218 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 FFAR1O14842 300 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 RNF13O43567 381 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 IGLV1-44P01699 117 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 CD8AP01732 235 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 B4GALT1P15291 398 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 ZNF20P17024 532 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 FUT1P19526 365 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 BTF3P20290 206 aaKnown RBP6□□□□□ -1.45
HMGN1-205ENST00000419378 NR4A1P22736 598 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 ZFP36P26651 326 aaKnown RBP6□□□□□ -1.45
HMGN1-205ENST00000419378 IFNA8P32881 189 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 CDKN1AP38936 164 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 AQP2P41181 271 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 CSNK1A1P48729 337 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 ATP5J2P56134 94 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 LOXL3P58215 753 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 CAMK2DQ13557 499 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 BEAN1Q3B7T3 259 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 ZIK1Q3SY52 487 aaPredicted RBP6□□□□□ -1.45
HMGN1-205ENST00000419378 NRN1LQ496H8 165 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 LCE1DQ5T752 114 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 AGAP6Q5VW22 663 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 PRSS57Q6UWY2 283 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 ZNF627Q7L945 461 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 DTX2Q86UW9 622 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 MYPOPQ86VE0 399 aaPredicted RBP6□□□□□ -1.45
HMGN1-205ENST00000419378 NRMQ8IXM6 262 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 ADGRG5Q8IZF4 528 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 PGAM4Q8N0Y7 254 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 FAM86B1Q8N7N1 296 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 CPEB3Q8NE35 698 aaKnown RBP6□□□□□ -1.45
HMGN1-205ENST00000419378 OR6X1Q8NH79 312 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 MOSPD2Q8NHP6 518 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 LIPHQ8WWY8 451 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 TMEM54Q969K7 222 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 Q96MF0 132 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 HS6ST2Q96MM7 605 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 CCT8L2Q96SF2 557 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 DHRS9Q9BPW9 319 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 TRAF4Q9BUZ4 470 aaPredicted RBP6□□□□□ -1.45
HMGN1-205ENST00000419378 FNDC11Q9BVV2 318 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 MOV10Q9HCE1 1003 aaKnown RBP6□□□□□ -1.45
HMGN1-205ENST00000419378 FAIMQ9NVQ4 179 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 GLTPQ9NZD2 209 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 CRNNQ9UBG3 495 aaPredicted RBP6□□□□□ -1.45
HMGN1-205ENST00000419378 RPS6KA6Q9UK32 745 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 SAMD4AQ9UPU9 718 aaKnown RBP6□□□□□ -1.45
HMGN1-205ENST00000419378 MOKQ9UQ07 419 aa6□□□□□ -1.45
HMGN1-205ENST00000419378 NSD1Q96L73 2696 aaPredicted RBP5.99□□□□□ -1.45
HMGN1-205ENST00000419378 A0A1W2PRG6 482 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 HTR3EA5X5Y0 456 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 TRIM64A6NGJ6 449 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 TRIM64BA6NI03 449 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 F5H697 171 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 BLOC1S5-TXNDC5H3BN57 136 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 BCL10O95999 233 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 IGKV3-15P01624 115 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 IGHG1P01857 330 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 HLA-HP01893 362 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 CRYAAP02489 173 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 TSPAN19P0C672 248 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 CECR9P0C854 216 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 PGA4P0DJD7 388 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 PGA3P0DJD8 388 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 IFI30P13284 250 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 HSD17B1P14061 328 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 TCN1P20061 433 aaPredicted RBP5.99□□□□□ -1.45
HMGN1-205ENST00000419378 MAKP20794 623 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 PAX7P23759 505 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 CALCRP30988 508 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 TTKP33981 857 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 CAPZA2P47755 286 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 FABP6P51161 128 aa5.99□□□□□ -1.45
HMGN1-205ENST00000419378 DAP3P51398 398 aaKnown RBP5.99□□□□□ -1.45
HMGN1-205ENST00000419378 IDH3GP51553 393 aaPredicted RBP5.99□□□□□ -1.45
HMGN1-205ENST00000419378 RPS7P62081 194 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms