RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 VANGL1Q8TAA9 524 aaPredicted RBP2.3□□□□□ -2.04
APP-207ENST00000415997 TUBGCP3Q96CW5 907 aa2.3□□□□□ -2.04
APP-207ENST00000415997 NMD3Q96D46 503 aaKnown RBP2.3□□□□□ -2.04
APP-207ENST00000415997 SAMD8Q96LT4 415 aa2.3□□□□□ -2.04
APP-207ENST00000415997 SERPINB12Q96P63 405 aa2.3□□□□□ -2.04
APP-207ENST00000415997 GPR78Q96P69 363 aa2.3□□□□□ -2.04
APP-207ENST00000415997 OR5M11Q96RB7 305 aa2.3□□□□□ -2.04
APP-207ENST00000415997 OR8B2Q96RD0 313 aa2.3□□□□□ -2.04
APP-207ENST00000415997 EPYCQ99645 322 aa2.3□□□□□ -2.04
APP-207ENST00000415997 ARHGDIGQ99819 225 aa2.3□□□□□ -2.04
APP-207ENST00000415997 SSX3Q99909 188 aa2.3□□□□□ -2.04
APP-207ENST00000415997 ABHD14AQ9BUJ0 271 aa2.3□□□□□ -2.04
APP-207ENST00000415997 EGLN1Q9GZT9 426 aa2.3□□□□□ -2.04
APP-207ENST00000415997 IL22Q9GZX6 179 aa2.3□□□□□ -2.04
APP-207ENST00000415997 MAP6D1Q9H9H5 199 aa2.3□□□□□ -2.04
APP-207ENST00000415997 FBXO6Q9NRD1 293 aaPredicted RBP2.3□□□□□ -2.04
APP-207ENST00000415997 SERINC1Q9NRX5 453 aa2.3□□□□□ -2.04
APP-207ENST00000415997 TAS2R9Q9NYW1 312 aa2.3□□□□□ -2.04
APP-207ENST00000415997 CLN8Q9UBY8 286 aa2.3□□□□□ -2.04
APP-207ENST00000415997 CRCT1Q9UGL9 99 aa2.3□□□□□ -2.04
APP-207ENST00000415997 MRTO4Q9UKD2 239 aaKnown RBP2.3□□□□□ -2.04
APP-207ENST00000415997 TRAPPC4Q9Y296 219 aa2.3□□□□□ -2.04
APP-207ENST00000415997 KPTNQ9Y664 436 aa2.3□□□□□ -2.04
APP-207ENST00000415997 PKHD1L1Q86WI1 4243 aa2.29□□□□□ -2.04
APP-207ENST00000415997 A0A087WV62 115 aa2.29□□□□□ -2.04
APP-207ENST00000415997 IGLV1-36A0A0B4J1U3 117 aa2.29□□□□□ -2.04
APP-207ENST00000415997 ZCWPW2A0A1B0GU75 182 aa2.29□□□□□ -2.04
APP-207ENST00000415997 A0A1B0GVI7 797 aa2.29□□□□□ -2.04
APP-207ENST00000415997 GXYLT2A0PJZ3 443 aa2.29□□□□□ -2.04
APP-207ENST00000415997 A6NDX4 124 aa2.29□□□□□ -2.04
APP-207ENST00000415997 SEC14L6B5MCN3 397 aa2.29□□□□□ -2.04
APP-207ENST00000415997 UPK1AO00322 258 aa2.29□□□□□ -2.04
APP-207ENST00000415997 PSTPIP1O43586 416 aa2.29□□□□□ -2.04
APP-207ENST00000415997 TUSC2O75896 110 aa2.29□□□□□ -2.04
APP-207ENST00000415997 SEMA3DO95025 777 aa2.29□□□□□ -2.04
APP-207ENST00000415997 SNAP29O95721 258 aa2.29□□□□□ -2.04
APP-207ENST00000415997 ACP2P11117 423 aa2.29□□□□□ -2.04
APP-207ENST00000415997 LCN1P31025 176 aa2.29□□□□□ -2.04
APP-207ENST00000415997 SLC1A1P43005 524 aa2.29□□□□□ -2.04
APP-207ENST00000415997 VDAC2P45880 294 aaPredicted RBP2.29□□□□□ -2.04
APP-207ENST00000415997 MARCKSL1P49006 195 aa2.29□□□□□ -2.04
APP-207ENST00000415997 NPY4RP50391 375 aa2.29□□□□□ -2.04
APP-207ENST00000415997 INSL3P51460 131 aa2.29□□□□□ -2.04
APP-207ENST00000415997 P2RX1P51575 399 aa2.29□□□□□ -2.04
APP-207ENST00000415997 BMXP51813 675 aa2.29□□□□□ -2.04
APP-207ENST00000415997 CDH13P55290 713 aa2.29□□□□□ -2.04
APP-207ENST00000415997 UCP2P55851 309 aa2.29□□□□□ -2.04
APP-207ENST00000415997 SELENOVP59797 346 aa2.29□□□□□ -2.04
APP-207ENST00000415997 BLCAPP62952 87 aa2.29□□□□□ -2.04
APP-207ENST00000415997 EWSR1Q01844 656 aaKnown RBP eCLIP2.29□□□□□ -2.04
APP-207ENST00000415997 ACSM1Q08AH1 577 aa2.29□□□□□ -2.04
APP-207ENST00000415997 CHIT1Q13231 466 aa2.29□□□□□ -2.04
APP-207ENST00000415997 SELPLGQ14242 412 aa2.29□□□□□ -2.04
APP-207ENST00000415997 QPRTQ15274 297 aa2.29□□□□□ -2.04
APP-207ENST00000415997 RASA2Q15283 850 aa2.29□□□□□ -2.04
APP-207ENST00000415997 CNN3Q15417 329 aaKnown RBP2.29□□□□□ -2.04
APP-207ENST00000415997 CCNG2Q16589 344 aa2.29□□□□□ -2.04
APP-207ENST00000415997 PDK4Q16654 411 aa2.29□□□□□ -2.04
APP-207ENST00000415997 HIST2H2ACQ16777 129 aaPredicted RBP2.29□□□□□ -2.04
APP-207ENST00000415997 TPD52L1Q16890 204 aaPredicted RBP2.29□□□□□ -2.04
APP-207ENST00000415997 LRRC75BQ2VPJ9 315 aa2.29□□□□□ -2.04
APP-207ENST00000415997 ARHGAP11BQ3KRB8 267 aa2.29□□□□□ -2.04
APP-207ENST00000415997 KLHL26Q53HC5 615 aa2.29□□□□□ -2.04
APP-207ENST00000415997 CEP85LQ5SZL2 805 aa2.29□□□□□ -2.04
APP-207ENST00000415997 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.29□□□□□ -2.04
APP-207ENST00000415997 HIST2H2AA3Q6FI13 130 aa2.29□□□□□ -2.04
APP-207ENST00000415997 HCP5Q6MZN7 132 aa2.29□□□□□ -2.04
APP-207ENST00000415997 MED27Q6P2C8 311 aa2.29□□□□□ -2.04
APP-207ENST00000415997 LYPD2Q6UXB3 125 aa2.29□□□□□ -2.04
APP-207ENST00000415997 PPP1R21Q6ZMI0 780 aa2.29□□□□□ -2.04
APP-207ENST00000415997 LINC00322Q6ZN03 302 aaPredicted RBP2.29□□□□□ -2.04
APP-207ENST00000415997 H1FNTQ75WM6 255 aaPredicted RBP2.29□□□□□ -2.04
APP-207ENST00000415997 OR2W3Q7Z3T1 314 aa2.29□□□□□ -2.04
APP-207ENST00000415997 IGFN1Q86VF2 1251 aa2.29□□□□□ -2.04
APP-207ENST00000415997 RNF130Q86XS8 419 aa2.29□□□□□ -2.04
APP-207ENST00000415997 LYPD6Q86Y78 171 aa2.29□□□□□ -2.04
APP-207ENST00000415997 PNKDQ8N490 385 aa2.29□□□□□ -2.04
APP-207ENST00000415997 OTUD6BQ8N6M0 293 aa2.29□□□□□ -2.04
APP-207ENST00000415997 ZNF645Q8N7E2 425 aa2.29□□□□□ -2.04
APP-207ENST00000415997 Q8N7P7 452 aa2.29□□□□□ -2.04
APP-207ENST00000415997 L3MBTL4Q8NA19 623 aa2.29□□□□□ -2.04
APP-207ENST00000415997 NPEPL1Q8NDH3 523 aa2.29□□□□□ -2.04
APP-207ENST00000415997 OR52H1Q8NGJ2 320 aa2.29□□□□□ -2.04
APP-207ENST00000415997 TRPC4APQ8TEL6 797 aa2.29□□□□□ -2.04
APP-207ENST00000415997 TMED6Q8WW62 240 aa2.29□□□□□ -2.04
APP-207ENST00000415997 C11orf40Q8WZ69 217 aa2.29□□□□□ -2.04
APP-207ENST00000415997 RORBQ92753 470 aa2.29□□□□□ -2.04
APP-207ENST00000415997 UBE2E3Q969T4 207 aa2.29□□□□□ -2.04
APP-207ENST00000415997 KLHL29Q96CT2 875 aa2.29□□□□□ -2.04
APP-207ENST00000415997 ZHX1-C8orf76Q96EF9 292 aa2.29□□□□□ -2.04
APP-207ENST00000415997 MTERF1Q99551 399 aaKnown RBP2.29□□□□□ -2.04
APP-207ENST00000415997 CCDC106Q9BWC9 280 aa2.29□□□□□ -2.04
APP-207ENST00000415997 FRMD8P1Q9BZ68 369 aaPredicted RBP2.29□□□□□ -2.04
APP-207ENST00000415997 SHCBP1LQ9BZQ2 653 aa2.29□□□□□ -2.04
APP-207ENST00000415997 SEBOXQ9HB31 216 aaPredicted RBP2.29□□□□□ -2.04
APP-207ENST00000415997 RETNQ9HD89 108 aa2.29□□□□□ -2.04
APP-207ENST00000415997 Q9N2J8 555 aa2.29□□□□□ -2.04
APP-207ENST00000415997 SIRT7Q9NRC8 400 aa2.29□□□□□ -2.04
APP-207ENST00000415997 UBQLN4Q9NRR5 601 aa2.29□□□□□ -2.04
APP-207ENST00000415997 CYSLTR2Q9NS75 346 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms