RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 TOX3O15405 576 aaPredicted RBP8.47□□□□□ -1.05
SNHG3-201ENST00000413987 CHST10O43529 356 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 PCDH7O60245 1069 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 LCMT2O60294 686 aaKnown RBP8.47□□□□□ -1.05
SNHG3-201ENST00000413987 FCGR3BO75015 233 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 NKX2-2O95096 273 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 CXCL3P19876 107 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 BDKRB2P30411 391 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 THBS4P35443 961 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 CAV3P56539 151 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 C1orf61Q13536 156 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 GANABQ14697 944 aaKnown RBP8.47□□□□□ -1.05
SNHG3-201ENST00000413987 NFATC4Q14934 902 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 HES5Q5TA89 166 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 FAM198BQ6UWH4 519 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 TMEM108Q6UXF1 575 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 HSD17B13Q7Z5P4 300 aaPredicted RBP8.47□□□□□ -1.05
SNHG3-201ENST00000413987 FTMTQ8N4E7 242 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 FAM89BQ8N5H3 189 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 EIF4E3Q8N5X7 224 aaKnown RBP8.47□□□□□ -1.05
SNHG3-201ENST00000413987 GATSQ8NAP1 163 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 SYT14Q8NB59 555 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 OR4C5Q8NGB2 326 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 NEIL3Q8TAT5 605 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 PATE1Q8WXA2 126 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 CXorf40BQ96DE9 158 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 SENP5Q96HI0 755 aaPredicted RBP8.47□□□□□ -1.05
SNHG3-201ENST00000413987 HIST1H2AHQ96KK5 128 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 FOXB1Q99853 325 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 EBPLQ9BY08 206 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 ASCL3Q9NQ33 180 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 ASB6Q9NWX5 421 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 METRNQ9UJH8 293 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 ASF1AQ9Y294 204 aa8.47□□□□□ -1.05
SNHG3-201ENST00000413987 ASPMQ8IZT6 3477 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 A0A1B0GW55 424 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 GNG14A0A1W2PPG7 69 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 DCDC2BA2VCK2 349 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 CLEC18AA5D8T8 446 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 KLRC4-KLRK1H3BQV0 150 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 TERTO14746 1132 aaKnown RBP8.46□□□□□ -1.05
SNHG3-201ENST00000413987 SSNA1O43805 119 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 ZNF217O75362 1048 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 ITGA10O75578 1167 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 VAMP5O95183 116 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 C1orf105O95561 183 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 DUX4L2P0CJ85 424 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 DUX4L3P0CJ86 424 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 DUX4L4P0CJ87 422 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 DUX4L5P0CJ88 424 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 DUX4L6P0CJ89 424 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 DUX4L7P0CJ90 424 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 ACP2P11117 423 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 ELK1P19419 428 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 ACKR3P25106 362 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 CDK6Q00534 326 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 DHODHQ02127 395 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 FHL3Q13643 280 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 NDUFA9Q16795 377 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 CXorf66Q5JRM2 361 aaPredicted RBP8.46□□□□□ -1.05
SNHG3-201ENST00000413987 RNASEKQ6P5S7 137 aaKnown RBP8.46□□□□□ -1.05
SNHG3-201ENST00000413987 CLEC18BQ6UXF7 455 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 CEACAM20Q6UY09 585 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 MARCH9Q86YJ5 346 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 TMEM105Q8N8V8 129 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 AMER3Q8N944 861 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 CLEC18CQ8NCF0 446 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 OR2T35Q8NGX2 323 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 OR52N1Q8NH53 320 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 PCNPQ8WW12 178 aaKnown RBP8.46□□□□□ -1.05
SNHG3-201ENST00000413987 MARS2Q96GW9 593 aaKnown RBP8.46□□□□□ -1.05
SNHG3-201ENST00000413987 POLR2J3Q9H1A7 115 aaKnown RBP8.46□□□□□ -1.05
SNHG3-201ENST00000413987 ZNF701Q9NV72 531 aaPredicted RBP8.46□□□□□ -1.05
SNHG3-201ENST00000413987 TVP23BQ9NYZ1 205 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 VPS29Q9UBQ0 182 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 DUX4Q9UBX2 424 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 SH2B3Q9UQQ2 575 aa8.46□□□□□ -1.05
SNHG3-201ENST00000413987 ARHGEF17Q96PE2 2063 aaPredicted RBP8.46□□□□□ -1.05
SNHG3-201ENST00000413987 MBD3L5A6NJ08 208 aaPredicted RBP8.46□□□□□ -1.06
SNHG3-201ENST00000413987 SERPINE3A8MV23 424 aa8.46□□□□□ -1.06
SNHG3-201ENST00000413987 TMEM238C9JI98 176 aa8.46□□□□□ -1.06
SNHG3-201ENST00000413987 AIPO00170 330 aa8.46□□□□□ -1.06
SNHG3-201ENST00000413987 PRAMEF2O60811 474 aa8.46□□□□□ -1.06
SNHG3-201ENST00000413987 PRAF2O60831 178 aa8.46□□□□□ -1.06
SNHG3-201ENST00000413987 FGF2P09038 288 aa8.46□□□□□ -1.06
SNHG3-201ENST00000413987 ETFAP13804 333 aa8.46□□□□□ -1.06
SNHG3-201ENST00000413987 NID1P14543 1247 aa8.46□□□□□ -1.06
SNHG3-201ENST00000413987 ACADLP28330 430 aa8.46□□□□□ -1.06
SNHG3-201ENST00000413987 CALCRP30988 508 aa8.46□□□□□ -1.06
SNHG3-201ENST00000413987 BTCP35070 178 aa8.46□□□□□ -1.06
SNHG3-201ENST00000413987 C2orf80Q0P641 193 aa8.46□□□□□ -1.06
SNHG3-201ENST00000413987 PSG3Q16557 428 aa8.46□□□□□ -1.06
SNHG3-201ENST00000413987 GSG1Q2KHT4 349 aa8.46□□□□□ -1.06
SNHG3-201ENST00000413987 XKR6Q5GH73 641 aa8.46□□□□□ -1.06
SNHG3-201ENST00000413987 METRNLQ641Q3 311 aa8.46□□□□□ -1.06
SNHG3-201ENST00000413987 DCUN1D3Q8IWE4 304 aa8.46□□□□□ -1.06
SNHG3-201ENST00000413987 KLHDC8AQ8IYD2 350 aa8.46□□□□□ -1.06
SNHG3-201ENST00000413987 RNF175Q8N4F7 328 aa8.46□□□□□ -1.06
SNHG3-201ENST00000413987 WDR92Q96MX6 357 aa8.46□□□□□ -1.06
SNHG3-201ENST00000413987 ZNF582Q96NG8 517 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms