RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 RAB39AQ14964 217 aa13.39□□□□□ -0.27
TRAPPC12-203ENST00000411973 RCN1Q15293 331 aa13.39□□□□□ -0.27
TRAPPC12-203ENST00000411973 PABPC1L2AQ5JQF8 200 aa13.39□□□□□ -0.27
TRAPPC12-203ENST00000411973 C20orf204Q6ZNR8 217 aa13.39□□□□□ -0.27
TRAPPC12-203ENST00000411973 ZNF611Q8N823 705 aa13.39□□□□□ -0.27
TRAPPC12-203ENST00000411973 PROKR2Q8NFJ6 384 aa13.39□□□□□ -0.27
TRAPPC12-203ENST00000411973 ZNRF4Q8WWF5 429 aa13.39□□□□□ -0.27
TRAPPC12-203ENST00000411973 AKAP1Q92667 903 aaKnown RBP eCLIP13.39□□□□□ -0.27
TRAPPC12-203ENST00000411973 PTP4A1Q93096 173 aa13.39□□□□□ -0.27
TRAPPC12-203ENST00000411973 OR2H1Q9GZK4 316 aa13.39□□□□□ -0.27
TRAPPC12-203ENST00000411973 MOKQ9UQ07 419 aa13.39□□□□□ -0.27
TRAPPC12-203ENST00000411973 IQCMA0A1B0GVH7 501 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 FAM171A2A8MVW0 826 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 ATP6V1G2-DDX39BF2Z307 99 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 GPANK1O95872 356 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 PAICSP22234 425 aaKnown RBP13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 CALCRP30988 508 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 PYCR1P32322 319 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 POLR2IP36954 125 aaKnown RBP13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 BLVRAP53004 296 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 RAD23AP54725 363 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 EFNB1P98172 346 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 TEKQ02763 1124 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 PLP2Q04941 152 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 SCRN3Q0VDG4 424 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 SNAPC1Q16533 368 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 C12orf73Q69YU5 71 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 ZBTB49Q6ZSB9 765 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 ALDH16A1Q8IZ83 802 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 CPEB3Q8NE35 698 aaKnown RBP13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 OR4F15Q8NGB8 312 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 OR9Q1Q8NGQ5 310 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 NRGNQ92686 78 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 NEUROG1Q92886 237 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 FBXW5Q969U6 566 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 EME1Q96AY2 570 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 SLC29A1Q99808 456 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 KCNS3Q9BQ31 491 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 HCAR1Q9BXC0 346 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 PRRG3Q9BZD7 231 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 LIME1Q9H400 295 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 MRPL22Q9NWU5 206 aaKnown RBP13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 TVP23BQ9NYZ1 205 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 CISD1Q9NZ45 108 aaKnown RBP13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 KCNG2Q9UJ96 466 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 EDARQ9UNE0 448 aa13.38□□□□□ -0.27
TRAPPC12-203ENST00000411973 FAM183AA6NL82 134 aa13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 E7EQL1 145 aa13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 PRR23D1E9PI22 279 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 E9PQ18 207 aa13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 SNAP29O95721 258 aa13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 HLA-DQA2P01906 255 aa13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 GYPBP06028 91 aa13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 PRR23D2P0DMB1 279 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 CLUP10909 449 aa13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 CDH11P55287 796 aa13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 HIST1H3AP68431 136 aa13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 MEP1BQ16820 701 aa13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 HIST2H3PS2Q5TEC6 136 aa13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 LINC01590Q5TEZ4 76 aa13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 PLBD1Q6P4A8 553 aa13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 PAMR1Q6UXH9 720 aa13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 HIST2H3AQ71DI3 136 aa13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 SLC30A7Q8NEW0 376 aa13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 NUP37Q8NFH4 326 aa13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 OR10H5Q8NGA6 315 aa13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 OR51L1Q8NGJ5 315 aa13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 PLEKHA8Q96JA3 519 aa13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 WNT5BQ9H1J7 359 aa13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 RIBC2Q9H4K1 309 aa13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 DCLRE1BQ9H816 532 aa13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 UBTD1Q9HAC8 227 aa13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 HINT3Q9NQE9 182 aaKnown RBP13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 ASH2LQ9UBL3 628 aa13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 ST6GALNAC2Q9UJ37 374 aa13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 ORC6Q9Y5N6 252 aa13.37□□□□□ -0.27
TRAPPC12-203ENST00000411973 PRODHO43272 600 aa13.36□□□□□ -0.27
TRAPPC12-203ENST00000411973 GLCEO94923 617 aa13.36□□□□□ -0.27
TRAPPC12-203ENST00000411973 COX5BP10606 129 aa13.36□□□□□ -0.27
TRAPPC12-203ENST00000411973 STOMP27105 288 aa13.36□□□□□ -0.27
TRAPPC12-203ENST00000411973 FMO3P31513 532 aa13.36□□□□□ -0.27
TRAPPC12-203ENST00000411973 GGT2P36268 569 aa13.36□□□□□ -0.27
TRAPPC12-203ENST00000411973 NKX6-1P78426 367 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC12-203ENST00000411973 HGFACQ04756 655 aa13.36□□□□□ -0.27
TRAPPC12-203ENST00000411973 PCK2Q16822 640 aa13.36□□□□□ -0.27
TRAPPC12-203ENST00000411973 TBC1D28Q2M2D7 210 aa13.36□□□□□ -0.27
TRAPPC12-203ENST00000411973 OTPQ5XKR4 325 aa13.36□□□□□ -0.27
TRAPPC12-203ENST00000411973 ZNF774Q6NX45 483 aa13.36□□□□□ -0.27
TRAPPC12-203ENST00000411973 B3GLCTQ6Y288 498 aa13.36□□□□□ -0.27
TRAPPC12-203ENST00000411973 CPOQ8IVL8 374 aa13.36□□□□□ -0.27
TRAPPC12-203ENST00000411973 GJC3Q8NFK1 279 aa13.36□□□□□ -0.27
TRAPPC12-203ENST00000411973 OR1J2Q8NGS2 313 aa13.36□□□□□ -0.27
TRAPPC12-203ENST00000411973 IGFBPL1Q8WX77 278 aa13.36□□□□□ -0.27
TRAPPC12-203ENST00000411973 NINJ1Q92982 152 aa13.36□□□□□ -0.27
TRAPPC12-203ENST00000411973 DHRS9Q9BPW9 319 aa13.36□□□□□ -0.27
TRAPPC12-203ENST00000411973 GRIP2Q9C0E4 1043 aa13.36□□□□□ -0.27
TRAPPC12-203ENST00000411973 MED20Q9H944 212 aa13.36□□□□□ -0.27
TRAPPC12-203ENST00000411973 CYB5R1Q9UHQ9 305 aa13.36□□□□□ -0.27
TRAPPC12-203ENST00000411973 POU2F3Q9UKI9 436 aa13.36□□□□□ -0.27
TRAPPC12-203ENST00000411973 LHFPL6Q9Y693 200 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms