RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 ZDHHC8Q9ULC8 765 aa10.75□□□□□ -0.69
CHRNA1-203ENST00000409219 POMT1Q9Y6A1 747 aa10.75□□□□□ -0.69
CHRNA1-203ENST00000409219 LOC100653049A0A140TA62 436 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 C5orf63A6NC05 138 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 PLPP3O14495 311 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 DHHO43323 396 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 KRT34O76011 436 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 ANP32DO95626 131 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 MMP7P09237 267 aaPredicted RBP10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 VSIG8P0DPA2 414 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 THRBP10828 461 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 AHCYP23526 432 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 CLNS1AP54105 237 aaKnown RBP10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 PLP2Q04941 152 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 MAPRE2Q15555 327 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 RUSC1-AS1Q66K80 236 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 LRFN4Q6PJG9 635 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 C16orf89Q6UX73 402 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 ZNF620Q6ZNG0 422 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 RFPL4BQ6ZWI9 263 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 DPPA2Q7Z7J5 298 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 RAB40AQ8WXH6 277 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 CYSLTR2Q9NS75 346 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 KLHL21Q9UJP4 597 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 ZNF232Q9UNY5 417 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 C11orf98E9PRG8 122 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 UBDO15205 165 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 GPR137BO60478 399 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 WNT2P09544 360 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 CSF1P09603 554 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 LIPAP38571 399 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 MDH2P40926 338 aaKnown RBP10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 MRPL19P49406 292 aaKnown RBP10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 DSTNP60981 165 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 MELKQ14680 651 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 ZMAT1Q5H9K5 638 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 VAX1Q5SQQ9 334 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 COMTD1Q86VU5 262 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 DEFB107AQ8IZN7 70 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 PGAM4Q8N0Y7 254 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 OR6X1Q8NH79 312 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 DNAJA4Q8WW22 397 aaPredicted RBP10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 DYRK2Q92630 601 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 STMN2Q93045 179 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 CLPTM1LQ96KA5 538 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 NANOGQ9H9S0 305 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 CACYBPQ9HB71 228 aaKnown RBP10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 IFT52Q9Y366 437 aa10.74□□□□□ -0.69
CHRNA1-203ENST00000409219 A0A0G2JPF8 293 aa10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 HNRNPCL2B2RXH8 293 aa10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 HNRNPCL3B7ZW38 293 aa10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 FKBP6O75344 327 aa10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 KRT36O76013 467 aa10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 KRT75O95678 551 aa10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 PGA4P0DJD7 388 aa10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 PGA3P0DJD8 388 aa10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 HNRNPCL4P0DMR1 293 aa10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 ADORA3P0DMS8 318 aa10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 RPS2P15880 293 aaKnown RBP10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 CRATP43155 626 aa10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 HSF2Q03933 536 aa10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 SLC34A1Q06495 639 aa10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 PABPC1L2AQ5JQF8 200 aa10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 GPR157Q5UAW9 335 aa10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 C1orf146Q5VVC0 180 aa10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 SLC35D2Q76EJ3 337 aa10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 LRRC18Q8N456 261 aa10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 SSMEM1Q8WWF3 244 aa10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 ZNF566Q969W8 418 aa10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 SLC47A1Q96FL8 570 aa10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 FAM71F1Q96KD3 344 aaPredicted RBP10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 POM121L2Q96KW2 1035 aa10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 EPYCQ99645 322 aa10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 SLC19A3Q9BZV2 496 aa10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 EFCAB1Q9HAE3 211 aa10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 LRRC42Q9Y546 428 aa10.73□□□□□ -0.69
CHRNA1-203ENST00000409219 NOTCH3Q9UM47 2321 aa10.72□□□□□ -0.69
CHRNA1-203ENST00000409219 LOC100509620A0A075B734 347 aa10.72□□□□□ -0.69
CHRNA1-203ENST00000409219 OPN1MWP04001 364 aa10.72□□□□□ -0.69
CHRNA1-203ENST00000409219 QDPRP09417 244 aa10.72□□□□□ -0.69
CHRNA1-203ENST00000409219 OPN1MW2P0DN77 364 aa10.72□□□□□ -0.69
CHRNA1-203ENST00000409219 OPN1MW3P0DN78 364 aa10.72□□□□□ -0.69
CHRNA1-203ENST00000409219 STOMP27105 288 aa10.72□□□□□ -0.69
CHRNA1-203ENST00000409219 IL12AP29459 219 aa10.72□□□□□ -0.69
CHRNA1-203ENST00000409219 NUDT2P50583 147 aa10.72□□□□□ -0.69
CHRNA1-203ENST00000409219 NME5P56597 212 aa10.72□□□□□ -0.69
CHRNA1-203ENST00000409219 LOXL3P58215 753 aa10.72□□□□□ -0.69
CHRNA1-203ENST00000409219 BPIFB3P59826 476 aa10.72□□□□□ -0.69
CHRNA1-203ENST00000409219 UFM1P61960 85 aa10.72□□□□□ -0.69
CHRNA1-203ENST00000409219 PPP1CBP62140 327 aa10.72□□□□□ -0.69
CHRNA1-203ENST00000409219 GNB2P62879 340 aa10.72□□□□□ -0.69
CHRNA1-203ENST00000409219 RCN1Q15293 331 aa10.72□□□□□ -0.69
CHRNA1-203ENST00000409219 NRN1LQ496H8 165 aa10.72□□□□□ -0.69
CHRNA1-203ENST00000409219 PDCD4Q53EL6 469 aaKnown RBP10.72□□□□□ -0.69
CHRNA1-203ENST00000409219 MTX3Q5HYI7 312 aa10.72□□□□□ -0.69
CHRNA1-203ENST00000409219 OGFOD2Q6N063 350 aa10.72□□□□□ -0.69
CHRNA1-203ENST00000409219 ULK3Q6PHR2 472 aa10.72□□□□□ -0.69
CHRNA1-203ENST00000409219 KLBQ86Z14 1044 aa10.72□□□□□ -0.69
CHRNA1-203ENST00000409219 C1orf174Q8IYL3 243 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms