RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 PRDX6P30041 224 aa13.1□□□□□ -0.31
TPM1-207ENST00000403994 LIMS1P48059 325 aa13.1□□□□□ -0.31
TPM1-207ENST00000403994 DVL1P1P54792 670 aaPredicted RBP13.1□□□□□ -0.31
TPM1-207ENST00000403994 TMEM33P57088 247 aa13.1□□□□□ -0.31
TPM1-207ENST00000403994 PCBD1P61457 104 aa13.1□□□□□ -0.31
TPM1-207ENST00000403994 DGCR6Q14129 220 aa13.1□□□□□ -0.31
TPM1-207ENST00000403994 KRTAP24-1Q3LI83 254 aa13.1□□□□□ -0.31
TPM1-207ENST00000403994 ZBED5Q49AG3 693 aa13.1□□□□□ -0.31
TPM1-207ENST00000403994 FGD3Q5JSP0 725 aa13.1□□□□□ -0.31
TPM1-207ENST00000403994 ZNF774Q6NX45 483 aa13.1□□□□□ -0.31
TPM1-207ENST00000403994 UGT2A3Q6UWM9 527 aa13.1□□□□□ -0.31
TPM1-207ENST00000403994 ABHD4Q8TB40 342 aa13.1□□□□□ -0.31
TPM1-207ENST00000403994 MARS2Q96GW9 593 aaKnown RBP13.1□□□□□ -0.31
TPM1-207ENST00000403994 Q96M85 177 aa13.1□□□□□ -0.31
TPM1-207ENST00000403994 NDEL1Q9GZM8 345 aa13.1□□□□□ -0.31
TPM1-207ENST00000403994 EMC7Q9NPA0 242 aa13.1□□□□□ -0.31
TPM1-207ENST00000403994 NDUFAF4Q9P032 175 aa13.1□□□□□ -0.31
TPM1-207ENST00000403994 GRHPRQ9UBQ7 328 aa13.1□□□□□ -0.31
TPM1-207ENST00000403994 TEX13CA0A0J9YWL9 993 aa13.09□□□□□ -0.31
TPM1-207ENST00000403994 PRSS37A4D1T9 235 aa13.09□□□□□ -0.31
TPM1-207ENST00000403994 B4DSR2 109 aa13.09□□□□□ -0.31
TPM1-207ENST00000403994 FAM157AC9JC47 383 aa13.09□□□□□ -0.31
TPM1-207ENST00000403994 XKRYO14609 159 aa13.09□□□□□ -0.31
TPM1-207ENST00000403994 CDC14BO60729 498 aa13.09□□□□□ -0.31
TPM1-207ENST00000403994 SCG5P05408 212 aa13.09□□□□□ -0.31
TPM1-207ENST00000403994 CTLA4P16410 223 aa13.09□□□□□ -0.31
TPM1-207ENST00000403994 GUCA1AP43080 201 aaPredicted RBP13.09□□□□□ -0.31
TPM1-207ENST00000403994 SRSF2Q01130 221 aaKnown RBP13.09□□□□□ -0.31
TPM1-207ENST00000403994 KRR1Q13601 381 aaKnown RBP13.09□□□□□ -0.31
TPM1-207ENST00000403994 MBNL2Q5VZF2 373 aaKnown RBP13.09□□□□□ -0.31
TPM1-207ENST00000403994 RINLQ6ZS11 566 aa13.09□□□□□ -0.31
TPM1-207ENST00000403994 GLCCI1Q86VQ1 547 aa13.09□□□□□ -0.31
TPM1-207ENST00000403994 SLC25A40Q8TBP6 338 aa13.09□□□□□ -0.31
TPM1-207ENST00000403994 RASD2Q96D21 266 aa13.09□□□□□ -0.31
TPM1-207ENST00000403994 RSRC1Q96IZ7 334 aaKnown RBP13.09□□□□□ -0.31
TPM1-207ENST00000403994 C7orf34Q96L11 122 aa13.09□□□□□ -0.31
TPM1-207ENST00000403994 GPX7Q96SL4 187 aaPredicted RBP13.09□□□□□ -0.31
TPM1-207ENST00000403994 OR2J1Q9GZK6 312 aa13.09□□□□□ -0.31
TPM1-207ENST00000403994 SAP30LQ9HAJ7 183 aa13.09□□□□□ -0.31
TPM1-207ENST00000403994 DCAF13Q9NV06 445 aaKnown RBP13.09□□□□□ -0.31
TPM1-207ENST00000403994 EIF3KQ9UBQ5 218 aaKnown RBP13.09□□□□□ -0.31
TPM1-207ENST00000403994 TMEFF2Q9UIK5 374 aaPredicted RBP13.09□□□□□ -0.31
TPM1-207ENST00000403994 SIGLEC7Q9Y286 467 aa13.09□□□□□ -0.31
TPM1-207ENST00000403994 TIMM10BQ9Y5J6 103 aa13.09□□□□□ -0.31
TPM1-207ENST00000403994 IGHV1-69-2A0A0G2JMI3 117 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 TRBV4-1A0A0J9YWV2 114 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 ZSCAN5BA6NJL1 495 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 C12orf71A8MTZ7 269 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 H3BSA7 217 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 SNX3O60493 162 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 DOK2O60496 412 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 GAAP10253 952 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 RHCEP18577 417 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 GCH1P30793 250 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 SDHAP31040 664 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 ZNF81P51508 661 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 MMP15P51511 669 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 FXYD6P3P58550 94 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 LMO4P61968 165 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 PPP1CBP62140 327 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 SEC23BQ15437 767 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 MOGQ16653 247 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 ZNF718Q3SXZ3 478 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 AVPI1Q5T686 147 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 UNQ6126/PRO20091Q6UXV3 157 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 THSD4Q6ZMP0 1018 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 USP51Q70EK9 711 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 RRM2BQ7LG56 351 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 SYT9Q86SS6 491 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 ALDH16A1Q8IZ83 802 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 RNF148Q8N7C7 305 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 KLF14Q8TD94 323 aaPredicted RBP13.08□□□□□ -0.32
TPM1-207ENST00000403994 DHRS1Q96LJ7 313 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 LPAR2Q9HBW0 351 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 TREM2Q9NZC2 230 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 ADA2Q9NZK5 511 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 IL20RAQ9UHF4 553 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 SAMD4AQ9UPU9 718 aaKnown RBP13.08□□□□□ -0.32
TPM1-207ENST00000403994 CACNG2Q9Y698 323 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 V9GYQ6 96 aa13.08□□□□□ -0.32
TPM1-207ENST00000403994 PLSCR5A0PG75 271 aa13.07□□□□□ -0.32
TPM1-207ENST00000403994 TPD52L2O43399 206 aaKnown RBP13.07□□□□□ -0.32
TPM1-207ENST00000403994 AHCYL1O43865 530 aa13.07□□□□□ -0.32
TPM1-207ENST00000403994 DIRAS1O95057 198 aa13.07□□□□□ -0.32
TPM1-207ENST00000403994 NDUFB2O95178 105 aa13.07□□□□□ -0.32
TPM1-207ENST00000403994 NGFP01138 241 aa13.07□□□□□ -0.32
TPM1-207ENST00000403994 IGHV1-46P01743 117 aa13.07□□□□□ -0.32
TPM1-207ENST00000403994 SEMG1P04279 462 aa13.07□□□□□ -0.32
TPM1-207ENST00000403994 MSMBP08118 114 aa13.07□□□□□ -0.32
TPM1-207ENST00000403994 PCMT1P22061 227 aa13.07□□□□□ -0.32
TPM1-207ENST00000403994 CRYBB2P43320 205 aa13.07□□□□□ -0.32
TPM1-207ENST00000403994 OMPP47874 163 aa13.07□□□□□ -0.32
TPM1-207ENST00000403994 TSTQ16762 297 aaKnown RBP13.07□□□□□ -0.32
TPM1-207ENST00000403994 FAM209AQ5JX71 171 aa13.07□□□□□ -0.32
TPM1-207ENST00000403994 GLYATQ6IB77 296 aa13.07□□□□□ -0.32
TPM1-207ENST00000403994 C1orf174Q8IYL3 243 aa13.07□□□□□ -0.32
TPM1-207ENST00000403994 TMEM186Q96B77 213 aa13.07□□□□□ -0.32
TPM1-207ENST00000403994 FUZQ9BT04 418 aa13.07□□□□□ -0.32
TPM1-207ENST00000403994 NSRP1Q9H0G5 558 aaKnown RBP13.07□□□□□ -0.32
TPM1-207ENST00000403994 SYT4Q9H2B2 425 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms