RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 RAB1AP62820 205 aa13.9□□□□□ -0.18
HMGA1-204ENST00000401473 PPA1Q15181 289 aa13.9□□□□□ -0.18
HMGA1-204ENST00000401473 SNCBQ16143 134 aa13.9□□□□□ -0.18
HMGA1-204ENST00000401473 MEPCEQ7L2J0 689 aaKnown RBP13.9□□□□□ -0.18
HMGA1-204ENST00000401473 MUCL1Q96DR8 90 aa13.9□□□□□ -0.18
HMGA1-204ENST00000401473 ZNF582Q96NG8 517 aaPredicted RBP13.9□□□□□ -0.18
HMGA1-204ENST00000401473 DACH2Q96NX9 599 aa13.9□□□□□ -0.18
HMGA1-204ENST00000401473 COMMD3-BMI1R4GMX3 469 aa13.9□□□□□ -0.18
HMGA1-204ENST00000401473 ENTPD6O75354 484 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 WBP4O75554 376 aaKnown RBP13.89□□□□□ -0.19
HMGA1-204ENST00000401473 FARS2O95363 451 aaKnown RBP13.89□□□□□ -0.19
HMGA1-204ENST00000401473 HRGP04196 525 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 CST2P09228 141 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 CD79AP11912 226 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 GSTT1P30711 240 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 CAPZA2P47755 286 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 UBE2NP61088 152 aaKnown RBP13.89□□□□□ -0.19
HMGA1-204ENST00000401473 LSM6P62312 80 aaKnown RBP13.89□□□□□ -0.19
HMGA1-204ENST00000401473 CORO6Q6QEF8 472 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 MEX3BQ6ZN04 569 aaKnown RBP13.89□□□□□ -0.19
HMGA1-204ENST00000401473 MDP1Q86V88 176 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 MYPOPQ86VE0 399 aaPredicted RBP13.89□□□□□ -0.19
HMGA1-204ENST00000401473 TIGD4Q8IY51 512 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 DEPDC4Q8N2C3 294 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 SMAP2Q8WU79 429 aaPredicted RBP13.89□□□□□ -0.19
HMGA1-204ENST00000401473 APOL4Q9BPW4 351 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 LHFPL6Q9Y693 200 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 APCP25054 2843 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 SIAH2O43255 324 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 EPXP11678 715 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 ZNF32P17041 273 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 HOXC12P31275 282 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 RPS7P62081 194 aaKnown RBP13.89□□□□□ -0.19
HMGA1-204ENST00000401473 IL5RAQ01344 420 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 OCLNQ16625 522 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 SMN1Q16637 294 aaKnown RBP13.89□□□□□ -0.19
HMGA1-204ENST00000401473 SLC35D3Q5M8T2 416 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 WFDC8Q8IUA0 241 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 ZNF584Q8IVC4 421 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 CCDC36Q8IYA8 594 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 SPOCK3Q9BQ16 436 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 MARCH7Q9H992 704 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 OBP2BQ9NPH6 170 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 H2AFY2Q9P0M6 372 aaPredicted RBP13.89□□□□□ -0.19
HMGA1-204ENST00000401473 ASH2LQ9UBL3 628 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 CYB5R1Q9UHQ9 305 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 AMDHD2Q9Y303 409 aa13.89□□□□□ -0.19
HMGA1-204ENST00000401473 ZNF593O00488 134 aaPredicted RBP13.88□□□□□ -0.19
HMGA1-204ENST00000401473 IGKV3-15P01624 115 aa13.88□□□□□ -0.19
HMGA1-204ENST00000401473 CELA3BP08861 270 aa13.88□□□□□ -0.19
HMGA1-204ENST00000401473 HCCSP53701 268 aa13.88□□□□□ -0.19
HMGA1-204ENST00000401473 ADAM8P78325 824 aa13.88□□□□□ -0.19
HMGA1-204ENST00000401473 PSG4Q00888 419 aa13.88□□□□□ -0.19
HMGA1-204ENST00000401473 MAD2L1BPQ15013 274 aaPredicted RBP13.88□□□□□ -0.19
HMGA1-204ENST00000401473 PCK2Q16822 640 aa13.88□□□□□ -0.19
HMGA1-204ENST00000401473 GSG1Q2KHT4 349 aa13.88□□□□□ -0.19
HMGA1-204ENST00000401473 LAIR2Q6ISS4 152 aa13.88□□□□□ -0.19
HMGA1-204ENST00000401473 LINC00346Q8IVM7 164 aa13.88□□□□□ -0.19
HMGA1-204ENST00000401473 CNIH3Q8TBE1 160 aa13.88□□□□□ -0.19
HMGA1-204ENST00000401473 MS4A3Q96HJ5 214 aa13.88□□□□□ -0.19
HMGA1-204ENST00000401473 AMBNQ9NP70 447 aa13.88□□□□□ -0.19
HMGA1-204ENST00000401473 RER1O15258 196 aa13.87□□□□□ -0.19
HMGA1-204ENST00000401473 SELENOFO60613 162 aa13.87□□□□□ -0.19
HMGA1-204ENST00000401473 CBR1P16152 277 aa13.87□□□□□ -0.19
HMGA1-204ENST00000401473 PEX19P40855 299 aa13.87□□□□□ -0.19
HMGA1-204ENST00000401473 CDH11P55287 796 aa13.87□□□□□ -0.19
HMGA1-204ENST00000401473 SLC36A2Q495M3 483 aa13.87□□□□□ -0.19
HMGA1-204ENST00000401473 DPY19L4Q7Z388 723 aa13.87□□□□□ -0.19
HMGA1-204ENST00000401473 ERI1Q8IV48 349 aaKnown RBP13.87□□□□□ -0.19
HMGA1-204ENST00000401473 CPEB3Q8NE35 698 aaKnown RBP13.87□□□□□ -0.19
HMGA1-204ENST00000401473 RASSF4Q9H2L5 321 aa13.87□□□□□ -0.19
HMGA1-204ENST00000401473 MPZL2O60487 215 aa13.87□□□□□ -0.19
HMGA1-204ENST00000401473 UBL3O95164 117 aa13.87□□□□□ -0.19
HMGA1-204ENST00000401473 WNT11O96014 354 aa13.87□□□□□ -0.19
HMGA1-204ENST00000401473 ZNF14P17017 642 aaPredicted RBP13.87□□□□□ -0.19
HMGA1-204ENST00000401473 HTR1FP30939 366 aa13.87□□□□□ -0.19
HMGA1-204ENST00000401473 ZNF83P51522 516 aa13.87□□□□□ -0.19
HMGA1-204ENST00000401473 BLVRAP53004 296 aa13.87□□□□□ -0.19
HMGA1-204ENST00000401473 IL18R1Q13478 541 aa13.87□□□□□ -0.19
HMGA1-204ENST00000401473 SYT9Q86SS6 491 aa13.87□□□□□ -0.19
HMGA1-204ENST00000401473 GID4Q8IVV7 300 aa13.87□□□□□ -0.19
HMGA1-204ENST00000401473 AKR7LQ8NHP1 331 aa13.87□□□□□ -0.19
HMGA1-204ENST00000401473 FBLIM1Q8WUP2 373 aa13.87□□□□□ -0.19
HMGA1-204ENST00000401473 ZNF184Q99676 751 aaPredicted RBP13.87□□□□□ -0.19
HMGA1-204ENST00000401473 CDADC1Q9BWV3 514 aa13.87□□□□□ -0.19
HMGA1-204ENST00000401473 RNF121Q9H920 327 aa13.87□□□□□ -0.19
HMGA1-204ENST00000401473 HAO2Q9NYQ3 351 aa13.87□□□□□ -0.19
HMGA1-204ENST00000401473 CRNNQ9UBG3 495 aaPredicted RBP13.87□□□□□ -0.19
HMGA1-204ENST00000401473 PCDHGB5Q9Y5G0 923 aa13.87□□□□□ -0.19
HMGA1-204ENST00000401473 TIMM10BQ9Y5J6 103 aa13.87□□□□□ -0.19
HMGA1-204ENST00000401473 CSMD1Q96PZ7 3565 aa13.86□□□□□ -0.19
HMGA1-204ENST00000401473 DPRXA6NFQ7 191 aa13.86□□□□□ -0.19
HMGA1-204ENST00000401473 SLC22A31A6NKX4 558 aa13.86□□□□□ -0.19
HMGA1-204ENST00000401473 C12orf71A8MTZ7 269 aa13.86□□□□□ -0.19
HMGA1-204ENST00000401473 APOL3O95236 402 aa13.86□□□□□ -0.19
HMGA1-204ENST00000401473 IGLV1-44P01699 117 aa13.86□□□□□ -0.19
HMGA1-204ENST00000401473 MRPL3P09001 348 aaKnown RBP13.86□□□□□ -0.19
HMGA1-204ENST00000401473 ZNF823P16415 610 aa13.86□□□□□ -0.19
HMGA1-204ENST00000401473 CRYGSP22914 178 aa13.86□□□□□ -0.19
HMGA1-204ENST00000401473 NAA10P41227 235 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms