RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 OR56B2PQ8NGI1 322 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 OR5J2Q8NH18 312 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 OSTF1Q92882 214 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 TMEM54Q969K7 222 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 DUS3LQ96G46 650 aaKnown RBP3.3□□□□□ -1.88
UBE3A-202ENST00000397954 DDOQ99489 341 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 PAIP2Q9BPZ3 127 aaKnown RBP3.3□□□□□ -1.88
UBE3A-202ENST00000397954 C1orf50Q9BV19 199 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 HES7Q9BYE0 225 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 TRIM36Q9NQ86 728 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 SLC17A5Q9NRA2 495 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 FBXL2Q9UKC9 423 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 ZNF337Q9Y3M9 751 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 FKBP7Q9Y680 259 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 CEPT1Q9Y6K0 416 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 SPTBP11277 2137 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 UQCRHLA0A096LP55 91 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 A0A0G2JMM0 328 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 A0A1W2PPB8 328 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 A0A1W2PRS3 328 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 OR5H1A6NKK0 313 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 KIR3DP1A8MWS1 328 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 HS3ST1O14792 307 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 SNX3O60493 162 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 CPSF4O95639 269 aaKnown RBP3.3□□□□□ -1.88
UBE3A-202ENST00000397954 FAM107AO95990 144 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 IGLV1-44P01699 117 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 APOC1P02654 83 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 FCGR1AP12314 374 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 NCF2P19878 526 aaPredicted RBP3.3□□□□□ -1.88
UBE3A-202ENST00000397954 CRATP43155 626 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 PGGT1BP53609 377 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 PRKCDQ05655 676 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 DGCR6Q14129 220 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 ACKR1Q16570 336 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 HIST3H3Q16695 136 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 AGKQ53H12 422 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 FGD3Q5JSP0 725 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.3□□□□□ -1.88
UBE3A-202ENST00000397954 AGAP6Q5VW22 663 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 PTCHD4Q6ZW05 846 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 TMPRSS11FQ6ZWK6 438 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 YTHDF3Q7Z739 585 aaKnown RBP3.3□□□□□ -1.88
UBE3A-202ENST00000397954 KLBQ86Z14 1044 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 C20orf196Q8IYI0 205 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 C9orf106Q8NAJ2 232 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 TSPAN14Q8NG11 270 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 CDC26Q8NHZ8 85 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 NEU4Q8WWR8 484 aaPredicted RBP3.3□□□□□ -1.88
UBE3A-202ENST00000397954 PIK3R3Q92569 461 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 FAM46BQ96A09 425 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 ZC3HAV1LQ96H79 300 aaKnown RBP3.3□□□□□ -1.88
UBE3A-202ENST00000397954 KIRREL1Q96J84 757 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 TMEM68Q96MH6 324 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 SH3GL3Q99963 347 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 DHRS9Q9BPW9 319 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 ECSITQ9BQ95 431 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 C20orf27Q9GZN8 174 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 EGLN1Q9GZT9 426 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 KCNN2Q9H2S1 579 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 RNPEPL1Q9HAU8 725 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 CRLF2Q9HC73 371 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 IL1RAPQ9NPH3 570 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 ASB6Q9NWX5 421 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 SMPD3Q9NY59 655 aaPredicted RBP3.3□□□□□ -1.88
UBE3A-202ENST00000397954 EXTL2Q9UBQ6 330 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 SLC7A8Q9UHI5 535 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 TINAGQ9UJW2 476 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 NOSIPQ9Y314 301 aaKnown RBP3.3□□□□□ -1.88
UBE3A-202ENST00000397954 RNF115Q9Y4L5 304 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 FLVCR1Q9Y5Y0 555 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 PMF1-BGLAPU3KQ54 211 aa3.3□□□□□ -1.88
UBE3A-202ENST00000397954 UBR5O95071 2799 aaPredicted RBP3.29□□□□□ -1.88
UBE3A-202ENST00000397954 USP34Q70CQ2 3546 aa3.29□□□□□ -1.88
UBE3A-202ENST00000397954 CACNA1BQ00975 2339 aa3.29□□□□□ -1.88
UBE3A-202ENST00000397954 GTF3C1Q12789 2109 aa3.29□□□□□ -1.88
UBE3A-202ENST00000397954 NR5A2O00482 541 aa3.29□□□□□ -1.88
UBE3A-202ENST00000397954 SMAD9O15198 467 aaKnown RBP3.29□□□□□ -1.88
UBE3A-202ENST00000397954 PLPP2O43688 288 aa3.29□□□□□ -1.88
UBE3A-202ENST00000397954 GMFGO60234 142 aa3.29□□□□□ -1.88
UBE3A-202ENST00000397954 ZG16O60844 167 aa3.29□□□□□ -1.88
UBE3A-202ENST00000397954 MRPL33O75394 65 aaKnown RBP3.29□□□□□ -1.88
UBE3A-202ENST00000397954 LRATO95237 230 aa3.29□□□□□ -1.88
UBE3A-202ENST00000397954 BGLAPP02818 100 aa3.29□□□□□ -1.88
UBE3A-202ENST00000397954 SEMG1P04279 462 aa3.29□□□□□ -1.88
UBE3A-202ENST00000397954 IFNW1P05000 195 aa3.29□□□□□ -1.88
UBE3A-202ENST00000397954 BCHEP06276 602 aa3.29□□□□□ -1.88
UBE3A-202ENST00000397954 COX4I1P13073 169 aa3.29□□□□□ -1.88
UBE3A-202ENST00000397954 CBR1P16152 277 aa3.29□□□□□ -1.88
UBE3A-202ENST00000397954 SELEP16581 610 aa3.29□□□□□ -1.88
UBE3A-202ENST00000397954 GGT1P19440 569 aa3.29□□□□□ -1.88
UBE3A-202ENST00000397954 IL32P24001 234 aa3.29□□□□□ -1.88
UBE3A-202ENST00000397954 DUSP1P28562 367 aa3.29□□□□□ -1.88
UBE3A-202ENST00000397954 MAGEA2P43356 314 aa3.29□□□□□ -1.88
UBE3A-202ENST00000397954 MAGEB1P43366 347 aa3.29□□□□□ -1.88
UBE3A-202ENST00000397954 ZNF84P51523 738 aa3.29□□□□□ -1.88
UBE3A-202ENST00000397954 HMGA2P52926 109 aa3.29□□□□□ -1.88
UBE3A-202ENST00000397954 RGS8P57771 180 aaPredicted RBP3.29□□□□□ -1.88
UBE3A-202ENST00000397954 SUMO2P61956 95 aaKnown RBP3.29□□□□□ -1.88
UBE3A-202ENST00000397954 RPS4XP62701 263 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms