RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 IMPA2O14732 288 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 MGST1P10620 155 aaKnown RBP10.36□□□□□ -0.75
TTC28-201ENST00000397906 SHPKQ9UHJ6 478 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 GPR55Q9Y2T6 319 aaPredicted RBP10.36□□□□□ -0.75
TTC28-201ENST00000397906 IL1AP01583 271 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 RNF4P78317 190 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 EBPQ15125 230 aaKnown RBP10.36□□□□□ -0.75
TTC28-201ENST00000397906 SPRED3Q2MJR0 410 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 BTLAQ7Z6A9 289 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 LIN37Q96GY3 246 aaPredicted RBP10.36□□□□□ -0.75
TTC28-201ENST00000397906 MED6O75586 246 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 PTTG1O95997 202 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 GPR3P46089 330 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 SELENBP1Q13228 472 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 ACKR1Q16570 336 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 PDCD1LG2Q9BQ51 273 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 TAS2R4Q9NYW5 299 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 SLC23A1Q9UHI7 598 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 IGLV3-27P01718 113 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 ZNF133P52736 654 aaPredicted RBP10.36□□□□□ -0.75
TTC28-201ENST00000397906 SPCS2Q15005 226 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 TMEM92Q6UXU6 159 aa10.36□□□□□ -0.75
TTC28-201ENST00000397906 C19orf53Q9UNZ5 99 aaPredicted RBP10.36□□□□□ -0.75
TTC28-201ENST00000397906 SLC2A10O95528 541 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 FPR3P25089 353 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 SLC35A2P78381 396 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 BATFQ16520 125 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 H2BFWTQ7Z2G1 175 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 RIMS4Q9H426 269 aaPredicted RBP10.35□□□□□ -0.75
TTC28-201ENST00000397906 WNT16Q9UBV4 365 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 FAM221AA4D161 298 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 SMAP2Q8WU79 429 aaPredicted RBP10.35□□□□□ -0.75
TTC28-201ENST00000397906 TSPAN12O95859 305 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 SRMP19623 302 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 SOX18P35713 384 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 ZNF74Q16587 644 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 YIF1BQ5BJH7 314 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 GDPGP1Q6ZNW5 385 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 PFDN5Q99471 154 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 NCBP2LA6PVI3 153 aaKnown RBP10.35□□□□□ -0.75
TTC28-201ENST00000397906 SH2D1BO14796 132 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 CCDC28AQ8IWP9 274 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 K7EPK0 472 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 M0R135 149 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 FAM71E2Q8N5Q1 922 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 RDH5Q92781 318 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 ZNF799Q96GE5 643 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 ALKBH3Q96Q83 286 aaPredicted RBP10.35□□□□□ -0.75
TTC28-201ENST00000397906 CRYABP02511 175 aaKnown RBP10.35□□□□□ -0.75
TTC28-201ENST00000397906 RBP2P50120 134 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 TEX101Q9BY14 249 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 SDHBP21912 280 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 RBMS2Q15434 407 aaKnown RBP10.35□□□□□ -0.75
TTC28-201ENST00000397906 SOWAHCQ53LP3 525 aaPredicted RBP10.35□□□□□ -0.75
TTC28-201ENST00000397906 WIPI1Q5MNZ9 446 aaPredicted RBP10.35□□□□□ -0.75
TTC28-201ENST00000397906 ST8SIA4Q92187 359 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 SLAMF6Q96DU3 332 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 PPM1DO15297 605 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 THEM4Q5T1C6 240 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 MAVSQ7Z434 540 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 FBXL14Q8N1E6 418 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 TMEM38AQ9H6F2 299 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 FBXL4Q9UKA2 621 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 PUS1Q9Y606 427 aaKnown RBP eCLIP10.35□□□□□ -0.75
TTC28-201ENST00000397906 FOLR1P15328 257 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 TGM1P22735 817 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 KCNJ8Q15842 424 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 PLA1AQ53H76 456 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 ACTBL2Q562R1 376 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 ZNF385BQ569K4 471 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 ZNF546Q86UE3 836 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 I6L893 689 aaPredicted RBP10.35□□□□□ -0.75
TTC28-201ENST00000397906 MMP11P24347 488 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 ZNF83P51522 516 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 IHHQ14623 411 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.35□□□□□ -0.75
TTC28-201ENST00000397906 UBQLN3Q9H347 655 aa10.35□□□□□ -0.75
TTC28-201ENST00000397906 CSF3P09919 207 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 RAB5BP61020 215 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 DPPA2Q7Z7J5 298 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 WDR5BQ86VZ2 330 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 TMEM174Q8WUU8 243 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 KIRREL1Q96J84 757 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 DUSP22Q9NRW4 184 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 MEIKINA0A087WXM9 373 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 SLC22A23A1A5C7 686 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 BHLHE40O14503 412 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 TAS2R30P59541 319 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 CMTM2Q8TAZ6 248 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 POMT2Q9UKY4 750 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 CDC14BO60729 498 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 CDAP32320 146 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 MEOX1P50221 254 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 NLRC3Q7RTR2 1065 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 ADGRE4PQ86SQ3 457 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 TMEM104Q8NE00 496 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 TNFSF8P32971 234 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 RPS27P42677 84 aaKnown RBP10.34□□□□□ -0.75
TTC28-201ENST00000397906 TESK1Q15569 626 aa10.34□□□□□ -0.75
TTC28-201ENST00000397906 LRRC56Q8IYG6 542 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms