RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 KLF3P57682 345 aaPredicted RBP13.67□□□□□ -0.22
CUX2-202ENST00000397643 PUDPQ08623 228 aa13.67□□□□□ -0.22
CUX2-202ENST00000397643 PIN1Q13526 163 aaPredicted RBP13.67□□□□□ -0.22
CUX2-202ENST00000397643 ALG10BQ5I7T1 473 aa13.67□□□□□ -0.22
CUX2-202ENST00000397643 TMEM154Q6P9G4 183 aa13.67□□□□□ -0.22
CUX2-202ENST00000397643 USP51Q70EK9 711 aa13.67□□□□□ -0.22
CUX2-202ENST00000397643 DOK3Q7L591 496 aa13.67□□□□□ -0.22
CUX2-202ENST00000397643 SLC30A7Q8NEW0 376 aa13.67□□□□□ -0.22
CUX2-202ENST00000397643 OR6N1Q8NGY5 312 aa13.67□□□□□ -0.22
CUX2-202ENST00000397643 FNDC11Q9BVV2 318 aa13.67□□□□□ -0.22
CUX2-202ENST00000397643 CHID1Q9BWS9 393 aa13.67□□□□□ -0.22
CUX2-202ENST00000397643 UNKLQ9H9P5 680 aaKnown RBP13.67□□□□□ -0.22
CUX2-202ENST00000397643 MRPL39Q9NYK5 338 aaKnown RBP13.67□□□□□ -0.22
CUX2-202ENST00000397643 RIMS3Q9UJD0 308 aa13.67□□□□□ -0.22
CUX2-202ENST00000397643 A0A0B4J2E0 115 aa13.66□□□□□ -0.22
CUX2-202ENST00000397643 A0A0G2JK05 382 aa13.66□□□□□ -0.22
CUX2-202ENST00000397643 A0A1B0GX12 115 aa13.66□□□□□ -0.22
CUX2-202ENST00000397643 DNAJC9-AS1A6NH13 148 aa13.66□□□□□ -0.22
CUX2-202ENST00000397643 CHP2O43745 196 aa13.66□□□□□ -0.22
CUX2-202ENST00000397643 CCL2P13500 99 aa13.66□□□□□ -0.22
CUX2-202ENST00000397643 PRTN3P24158 256 aa13.66□□□□□ -0.22
CUX2-202ENST00000397643 FPR2P25090 351 aa13.66□□□□□ -0.22
CUX2-202ENST00000397643 MAGEA2P43356 314 aa13.66□□□□□ -0.22
CUX2-202ENST00000397643 CSNK1A1P48729 337 aa13.66□□□□□ -0.22
CUX2-202ENST00000397643 CDH12P55289 794 aa13.66□□□□□ -0.22
CUX2-202ENST00000397643 SMIM11AP58511 58 aa13.66□□□□□ -0.22
CUX2-202ENST00000397643 ST3GAL3Q11203 375 aa13.66□□□□□ -0.22
CUX2-202ENST00000397643 PAPD5Q8NDF8 572 aaKnown RBP13.66□□□□□ -0.22
CUX2-202ENST00000397643 DEFB108BQ8NET1 73 aa13.66□□□□□ -0.22
CUX2-202ENST00000397643 SYNPRQ8TBG9 265 aa13.66□□□□□ -0.22
CUX2-202ENST00000397643 DUS3LQ96G46 650 aaKnown RBP13.66□□□□□ -0.22
CUX2-202ENST00000397643 MPP4Q96JB8 637 aa13.66□□□□□ -0.22
CUX2-202ENST00000397643 DUX5Q96PT3 197 aa13.66□□□□□ -0.22
CUX2-202ENST00000397643 OR51B6Q9H340 312 aa13.66□□□□□ -0.22
CUX2-202ENST00000397643 A4GNTQ9UNA3 340 aa13.66□□□□□ -0.22
CUX2-202ENST00000397643 AP4S1Q9Y587 144 aa13.66□□□□□ -0.22
CUX2-202ENST00000397643 WNK1Q9H4A3 2382 aa13.65□□□□□ -0.22
CUX2-202ENST00000397643 J3KTA2 159 aa13.65□□□□□ -0.22
CUX2-202ENST00000397643 PLPP3O14495 311 aa13.65□□□□□ -0.22
CUX2-202ENST00000397643 FKBP6O75344 327 aa13.65□□□□□ -0.22
CUX2-202ENST00000397643 SNAP29O95721 258 aa13.65□□□□□ -0.22
CUX2-202ENST00000397643 MT-ND1P03886 318 aa13.65□□□□□ -0.22
CUX2-202ENST00000397643 RAD52P43351 418 aa13.65□□□□□ -0.22
CUX2-202ENST00000397643 LCN2P80188 198 aa13.65□□□□□ -0.22
CUX2-202ENST00000397643 TEKQ02763 1124 aa13.65□□□□□ -0.22
CUX2-202ENST00000397643 MIDNQ504T8 468 aa13.65□□□□□ -0.22
CUX2-202ENST00000397643 TMEM255AQ5JRV8 349 aa13.65□□□□□ -0.22
CUX2-202ENST00000397643 ZFP1Q6P2D0 407 aa13.65□□□□□ -0.22
CUX2-202ENST00000397643 TSEN54Q7Z6J9 526 aaKnown RBP13.65□□□□□ -0.22
CUX2-202ENST00000397643 PXKQ7Z7A4 578 aa13.65□□□□□ -0.22
CUX2-202ENST00000397643 OFCC1Q8IZS5 231 aa13.65□□□□□ -0.22
CUX2-202ENST00000397643 SLC22A24Q8N4F4 322 aa13.65□□□□□ -0.22
CUX2-202ENST00000397643 ZNF519Q8TB69 540 aa13.65□□□□□ -0.22
CUX2-202ENST00000397643 SNX33Q8WV41 574 aa13.65□□□□□ -0.22
CUX2-202ENST00000397643 TMEM54Q969K7 222 aa13.65□□□□□ -0.22
CUX2-202ENST00000397643 ZNF48Q96MX3 618 aaPredicted RBP13.65□□□□□ -0.22
CUX2-202ENST00000397643 ASPNQ9BXN1 380 aa13.65□□□□□ -0.22
CUX2-202ENST00000397643 SAP30LQ9HAJ7 183 aa13.65□□□□□ -0.22
CUX2-202ENST00000397643 TMEM38BQ9NVV0 291 aa13.65□□□□□ -0.22
CUX2-202ENST00000397643 SLCO1C1Q9NYB5 712 aa13.65□□□□□ -0.22
CUX2-202ENST00000397643 GPR160Q9UJ42 338 aa13.65□□□□□ -0.22
CUX2-202ENST00000397643 SLC7A7Q9UM01 511 aa13.65□□□□□ -0.22
CUX2-202ENST00000397643 TANC2Q9HCD6 1990 aa13.64□□□□□ -0.23
CUX2-202ENST00000397643 PPIAL4EA0A075B759 164 aa13.64□□□□□ -0.23
CUX2-202ENST00000397643 PPIAL4CA0A0B4J2A2 164 aa13.64□□□□□ -0.23
CUX2-202ENST00000397643 SLC22A23A1A5C7 686 aa13.64□□□□□ -0.23
CUX2-202ENST00000397643 ZNF726A6NNF4 738 aa13.64□□□□□ -0.23
CUX2-202ENST00000397643 PPIAL4DF5H284 164 aa13.64□□□□□ -0.23
CUX2-202ENST00000397643 FFAR1O14842 300 aa13.64□□□□□ -0.23
CUX2-202ENST00000397643 DIRAS1O95057 198 aa13.64□□□□□ -0.23
CUX2-202ENST00000397643 H1F0P07305 194 aaKnown RBP13.64□□□□□ -0.23
CUX2-202ENST00000397643 PPIAL4FP0DN26 164 aa13.64□□□□□ -0.23
CUX2-202ENST00000397643 MAKP20794 623 aa13.64□□□□□ -0.23
CUX2-202ENST00000397643 ZFP36P26651 326 aaKnown RBP13.64□□□□□ -0.23
CUX2-202ENST00000397643 BIDP55957 195 aa13.64□□□□□ -0.23
CUX2-202ENST00000397643 SPIBQ01892 262 aa13.64□□□□□ -0.23
CUX2-202ENST00000397643 GLO1Q04760 184 aa13.64□□□□□ -0.23
CUX2-202ENST00000397643 PMS2P3Q13401 168 aa13.64□□□□□ -0.23
CUX2-202ENST00000397643 TRAM2Q15035 370 aa13.64□□□□□ -0.23
CUX2-202ENST00000397643 HFEQ30201 348 aa13.64□□□□□ -0.23
CUX2-202ENST00000397643 KLF17Q5JT82 389 aaPredicted RBP13.64□□□□□ -0.23
CUX2-202ENST00000397643 LRFN4Q6PJG9 635 aa13.64□□□□□ -0.23
CUX2-202ENST00000397643 TSPYL5Q86VY4 417 aaPredicted RBP13.64□□□□□ -0.23
CUX2-202ENST00000397643 BCL6BQ8N143 479 aaPredicted RBP13.64□□□□□ -0.23
CUX2-202ENST00000397643 TAF15Q92804 592 aaKnown RBP eCLIP13.64□□□□□ -0.23
CUX2-202ENST00000397643 STMN2Q93045 179 aa13.64□□□□□ -0.23
CUX2-202ENST00000397643 SLCO4A1Q96BD0 722 aa13.64□□□□□ -0.23
CUX2-202ENST00000397643 SH3GL3Q99963 347 aa13.64□□□□□ -0.23
CUX2-202ENST00000397643 GAL3ST1Q99999 423 aa13.64□□□□□ -0.23
CUX2-202ENST00000397643 ANKRD19PQ9H560 264 aa13.64□□□□□ -0.23
CUX2-202ENST00000397643 NMNAT1Q9HAN9 279 aaPredicted RBP13.64□□□□□ -0.23
CUX2-202ENST00000397643 ARMC1Q9NVT9 282 aa13.64□□□□□ -0.23
CUX2-202ENST00000397643 RHCGQ9UBD6 479 aa13.64□□□□□ -0.23
CUX2-202ENST00000397643 ZNF69Q9UC07 566 aa13.64□□□□□ -0.23
CUX2-202ENST00000397643 GNGT2O14610 69 aa13.63□□□□□ -0.23
CUX2-202ENST00000397643 ENTPD5O75356 428 aa13.63□□□□□ -0.23
CUX2-202ENST00000397643 SERPINI2O75830 405 aa13.63□□□□□ -0.23
CUX2-202ENST00000397643 KRT36O76013 467 aa13.63□□□□□ -0.23
CUX2-202ENST00000397643 LYPD3O95274 346 aa13.63□□□□□ -0.23
CUX2-202ENST00000397643 CST1P01037 141 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms