RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 J3QRE1 110 aa11.67□□□□□ -0.54
SEC13-209ENST00000397117 SELENOFO60613 162 aa11.67□□□□□ -0.54
SEC13-209ENST00000397117 KRT33AO76009 404 aa11.67□□□□□ -0.54
SEC13-209ENST00000397117 IGHA1P01876 353 aa11.67□□□□□ -0.54
SEC13-209ENST00000397117 GABRA1P14867 456 aa11.67□□□□□ -0.54
SEC13-209ENST00000397117 GUCA1AP43080 201 aaPredicted RBP11.67□□□□□ -0.54
SEC13-209ENST00000397117 TBCEQ15813 527 aaPredicted RBP11.67□□□□□ -0.54
SEC13-209ENST00000397117 ETFDHQ16134 617 aa11.67□□□□□ -0.54
SEC13-209ENST00000397117 ACSF3Q4G176 576 aaPredicted RBP11.67□□□□□ -0.54
SEC13-209ENST00000397117 RNLSQ5VYX0 342 aa11.67□□□□□ -0.54
SEC13-209ENST00000397117 SLC16A9Q7RTY1 509 aa11.67□□□□□ -0.54
SEC13-209ENST00000397117 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.67□□□□□ -0.54
SEC13-209ENST00000397117 ADGRE4PQ86SQ3 457 aa11.67□□□□□ -0.54
SEC13-209ENST00000397117 SLC35F2Q8IXU6 374 aa11.67□□□□□ -0.54
SEC13-209ENST00000397117 GPR137CQ8N3F9 429 aa11.67□□□□□ -0.54
SEC13-209ENST00000397117 FCGR1BQ92637 280 aa11.67□□□□□ -0.54
SEC13-209ENST00000397117 RORBQ92753 470 aa11.67□□□□□ -0.54
SEC13-209ENST00000397117 WNT2BQ93097 391 aa11.67□□□□□ -0.54
SEC13-209ENST00000397117 GMPPAQ96IJ6 420 aaPredicted RBP11.67□□□□□ -0.54
SEC13-209ENST00000397117 FOXN4Q96NZ1 517 aa11.67□□□□□ -0.54
SEC13-209ENST00000397117 INTS14Q96SY0 518 aa11.67□□□□□ -0.54
SEC13-209ENST00000397117 TBX5Q99593 518 aa11.67□□□□□ -0.54
SEC13-209ENST00000397117 ULBP2Q9BZM5 246 aa11.67□□□□□ -0.54
SEC13-209ENST00000397117 ACOT13Q9NPJ3 140 aa11.67□□□□□ -0.54
SEC13-209ENST00000397117 TAS2R16Q9NYV7 291 aa11.67□□□□□ -0.54
SEC13-209ENST00000397117 Q9UFV3 132 aa11.67□□□□□ -0.54
SEC13-209ENST00000397117 SMIM31A0A1B0GVY4 71 aa11.66□□□□□ -0.54
SEC13-209ENST00000397117 A0A1W2PPL8 197 aa11.66□□□□□ -0.54
SEC13-209ENST00000397117 OR6C65A6NJZ3 312 aa11.66□□□□□ -0.54
SEC13-209ENST00000397117 WDR1O75083 606 aa11.66□□□□□ -0.54
SEC13-209ENST00000397117 GPANK1O95872 356 aa11.66□□□□□ -0.54
SEC13-209ENST00000397117 ADRA2AP08913 450 aa11.66□□□□□ -0.54
SEC13-209ENST00000397117 OR2T7P0C7T2 308 aa11.66□□□□□ -0.54
SEC13-209ENST00000397117 FOSL1P15407 271 aa11.66□□□□□ -0.54
SEC13-209ENST00000397117 ZNF823P16415 610 aa11.66□□□□□ -0.54
SEC13-209ENST00000397117 JUNBP17275 347 aaPredicted RBP11.66□□□□□ -0.54
SEC13-209ENST00000397117 PCMT1P22061 227 aa11.66□□□□□ -0.54
SEC13-209ENST00000397117 ETV1P50549 477 aa11.66□□□□□ -0.54
SEC13-209ENST00000397117 ZNF84P51523 738 aa11.66□□□□□ -0.54
SEC13-209ENST00000397117 IRF3Q14653 427 aa11.66□□□□□ -0.54
SEC13-209ENST00000397117 XAF1Q6GPH4 301 aa11.66□□□□□ -0.54
SEC13-209ENST00000397117 OR2A2Q6IF42 318 aa11.66□□□□□ -0.54
SEC13-209ENST00000397117 LRFN4Q6PJG9 635 aa11.66□□□□□ -0.54
SEC13-209ENST00000397117 SLC25A47Q6Q0C1 308 aa11.66□□□□□ -0.54
SEC13-209ENST00000397117 LYPD4Q6UWN0 246 aa11.66□□□□□ -0.54
SEC13-209ENST00000397117 LHFPL3Q86UP9 236 aa11.66□□□□□ -0.54
SEC13-209ENST00000397117 OR2T27Q8NH04 317 aa11.66□□□□□ -0.54
SEC13-209ENST00000397117 NMD3Q96D46 503 aaKnown RBP11.66□□□□□ -0.54
SEC13-209ENST00000397117 JAM3Q9BX67 310 aa11.66□□□□□ -0.54
SEC13-209ENST00000397117 SEC61A2Q9H9S3 476 aa11.66□□□□□ -0.54
SEC13-209ENST00000397117 ERVK13-1Q9NX77 482 aa11.66□□□□□ -0.54
SEC13-209ENST00000397117 NDUFA13Q9P0J0 144 aa11.66□□□□□ -0.54
SEC13-209ENST00000397117 CLEC2DQ9UHP7 191 aa11.66□□□□□ -0.54
SEC13-209ENST00000397117 FOXD3Q9UJU5 478 aaPredicted RBP11.66□□□□□ -0.54
SEC13-209ENST00000397117 IGKV1D-43A0A0B4J1Z2 117 aa11.65□□□□□ -0.54
SEC13-209ENST00000397117 LAP3P28838 519 aa11.65□□□□□ -0.54
SEC13-209ENST00000397117 NTF4P34130 210 aa11.65□□□□□ -0.54
SEC13-209ENST00000397117 ADAM8P78325 824 aa11.65□□□□□ -0.54
SEC13-209ENST00000397117 HSF2Q03933 536 aa11.65□□□□□ -0.54
SEC13-209ENST00000397117 MED22Q15528 200 aa11.65□□□□□ -0.54
SEC13-209ENST00000397117 TMPRSS11AQ6ZMR5 421 aa11.65□□□□□ -0.54
SEC13-209ENST00000397117 TIGD4Q8IY51 512 aa11.65□□□□□ -0.54
SEC13-209ENST00000397117 ZNF100Q8IYN0 542 aa11.65□□□□□ -0.54
SEC13-209ENST00000397117 KLHL36Q8N4N3 616 aa11.65□□□□□ -0.54
SEC13-209ENST00000397117 OR10H5Q8NGA6 315 aa11.65□□□□□ -0.54
SEC13-209ENST00000397117 OR6N2Q8NGY6 317 aa11.65□□□□□ -0.54
SEC13-209ENST00000397117 SMAP2Q8WU79 429 aaPredicted RBP11.65□□□□□ -0.54
SEC13-209ENST00000397117 APH1AQ96BI3 265 aa11.65□□□□□ -0.54
SEC13-209ENST00000397117 MRPL48Q96GC5 212 aaKnown RBP11.65□□□□□ -0.54
SEC13-209ENST00000397117 MNTQ99583 582 aa11.65□□□□□ -0.54
SEC13-209ENST00000397117 TM9SF2Q99805 663 aa11.65□□□□□ -0.54
SEC13-209ENST00000397117 RBM24Q9BX46 236 aaKnown RBP11.65□□□□□ -0.54
SEC13-209ENST00000397117 YIPF3Q9GZM5 350 aa11.65□□□□□ -0.54
SEC13-209ENST00000397117 RBM38Q9H0Z9 239 aaKnown RBP11.65□□□□□ -0.54
SEC13-209ENST00000397117 SLCO5A1Q9H2Y9 848 aa11.65□□□□□ -0.54
SEC13-209ENST00000397117 WDR76Q9H967 626 aa11.65□□□□□ -0.54
SEC13-209ENST00000397117 LAMP5Q9UJQ1 280 aa11.65□□□□□ -0.54
SEC13-209ENST00000397117 TMEM14AQ9Y6G1 99 aa11.65□□□□□ -0.54
SEC13-209ENST00000397117 NSD1Q96L73 2696 aaPredicted RBP11.65□□□□□ -0.55
SEC13-209ENST00000397117 A0A1W2PQL4 384 aaPredicted RBP11.64□□□□□ -0.55
SEC13-209ENST00000397117 TMEM129A0AVI4 362 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 CD8B2A6NJW9 211 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 ZNF99A8MXY4 864 aaPredicted RBP11.64□□□□□ -0.55
SEC13-209ENST00000397117 ZNF670-ZNF695F2Z2N8 137 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 ZNF593O00488 134 aaPredicted RBP11.64□□□□□ -0.55
SEC13-209ENST00000397117 SS18L1O75177 396 aaPredicted RBP11.64□□□□□ -0.55
SEC13-209ENST00000397117 UPK3AO75631 287 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 PTHP01270 115 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 TFP02787 698 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 HRGP04196 525 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 LIMS3P0CW19 117 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 LIMS4P0CW20 117 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 PSMB9P28065 219 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 AGTR1P30556 359 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 ENTPD1P49961 510 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 HCCSP53701 268 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 SLC25A35Q3KQZ1 300 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 PHYHD1Q5SRE7 291 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 C10orf128Q5T292 105 aa11.64□□□□□ -0.55
SEC13-209ENST00000397117 C1orf185Q5T7R7 199 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms