RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 MAP3K8P41279 467 aa21.67■■□□□ 1.06
CSNK1E-203ENST00000396832 GPR143P51810 404 aa21.67■■□□□ 1.06
CSNK1E-203ENST00000396832 CTXN1P60606 82 aa21.67■■□□□ 1.06
CSNK1E-203ENST00000396832 TMEM229BQ8NBD8 167 aa21.67■■□□□ 1.06
CSNK1E-203ENST00000396832 AMELYQ99218 206 aa21.67■■□□□ 1.06
CSNK1E-203ENST00000396832 SMIM6P0DI80 62 aa21.66■■□□□ 1.06
CSNK1E-203ENST00000396832 SQSTM1Q13501 440 aa21.66■■□□□ 1.06
CSNK1E-203ENST00000396832 EXOSC6Q5RKV6 272 aaKnown RBP21.66■■□□□ 1.06
CSNK1E-203ENST00000396832 SKA3Q8IX90 412 aa21.66■■□□□ 1.06
CSNK1E-203ENST00000396832 PLPP7Q8NBV4 271 aa21.66■■□□□ 1.06
CSNK1E-203ENST00000396832 TSEN15Q8WW01 171 aaKnown RBP21.66■■□□□ 1.06
CSNK1E-203ENST00000396832 ZNF251Q9BRH9 671 aa21.66■■□□□ 1.06
CSNK1E-203ENST00000396832 MYOZ1Q9NP98 299 aaPredicted RBP21.66■■□□□ 1.06
CSNK1E-203ENST00000396832 LAMP5Q9UJQ1 280 aa21.66■■□□□ 1.06
CSNK1E-203ENST00000396832 A0A0A6YYC8 382 aaPredicted RBP21.66■■□□□ 1.06
CSNK1E-203ENST00000396832 OR4C45A6NMZ5 311 aa21.66■■□□□ 1.06
CSNK1E-203ENST00000396832 I3L1I5 382 aaPredicted RBP21.66■■□□□ 1.06
CSNK1E-203ENST00000396832 ZNF776Q68DI1 518 aaPredicted RBP21.66■■□□□ 1.06
CSNK1E-203ENST00000396832 SLC16A9Q7RTY1 509 aa21.66■■□□□ 1.06
CSNK1E-203ENST00000396832 ZNF595Q8IYB9 648 aa21.66■■□□□ 1.06
CSNK1E-203ENST00000396832 TCEAL3Q969E4 200 aa21.66■■□□□ 1.06
CSNK1E-203ENST00000396832 SLC22A18Q96BI1 424 aa21.66■■□□□ 1.06
CSNK1E-203ENST00000396832 RPP25Q9BUL9 199 aaKnown RBP21.66■■□□□ 1.06
CSNK1E-203ENST00000396832 NIT2Q9NQR4 276 aa21.66■■□□□ 1.06
CSNK1E-203ENST00000396832 WDR87Q6ZQQ6 2873 aa21.66■■□□□ 1.06
CSNK1E-203ENST00000396832 ZNF705EA8MWA4 302 aaPredicted RBP21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 OIP5O43482 229 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 CCKBRP32239 447 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 HABP2Q14520 560 aaPredicted RBP21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 ZCCHC12Q6PEW1 402 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 ZNF600Q6ZNG1 722 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 OR2G2Q8NGZ5 317 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 GPR148Q8TDV2 347 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 PIK3IP1Q96FE7 263 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 COMMD4Q9H0A8 199 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 TINAGQ9UJW2 476 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 ABHD16AO95870 558 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 RAB5BP61020 215 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 BTG2P78543 158 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 LINC00114Q6XXX2 140 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 ZNF627Q7L945 461 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 BPIFB2Q8N4F0 458 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 ZSCAN1Q8NBB4 408 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 C3orf49Q96BT1 292 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 ZNF524Q96C55 264 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 CTHRC1Q96CG8 243 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 CPNE2Q96FN4 548 aaPredicted RBP21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 RBM18Q96H35 190 aaKnown RBP21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 FAM60AQ9NP50 221 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 TMEM100Q9NV29 134 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 A0A087WUJ7 227 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 LOC100289279A0A1B0GTE1 492 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 CPED1A4D0V7 1026 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 ARPC3O15145 178 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 FARS2O95363 451 aaKnown RBP21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 RAB11BQ15907 218 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 CBLN3Q6UW01 205 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 ELP5Q8TE02 316 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 RNF141Q8WVD5 230 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 HRASLS2Q9NWW9 162 aa21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 NOSIPQ9Y314 301 aaKnown RBP21.65■■□□□ 1.06
CSNK1E-203ENST00000396832 ELOA3DA6NLF2 546 aaPredicted RBP21.64■■□□□ 1.05
CSNK1E-203ENST00000396832 AK1P00568 194 aa21.64■■□□□ 1.05
CSNK1E-203ENST00000396832 PLGP00747 810 aaPredicted RBP21.64■■□□□ 1.05
CSNK1E-203ENST00000396832 APODP05090 189 aa21.64■■□□□ 1.05
CSNK1E-203ENST00000396832 ZNF735P0CB33 412 aa21.64■■□□□ 1.05
CSNK1E-203ENST00000396832 PGAM2P15259 253 aa21.64■■□□□ 1.05
CSNK1E-203ENST00000396832 FCARP24071 287 aa21.64■■□□□ 1.05
CSNK1E-203ENST00000396832 KIR2DS3Q14952 304 aa21.64■■□□□ 1.05
CSNK1E-203ENST00000396832 PEA15Q15121 130 aa21.64■■□□□ 1.05
CSNK1E-203ENST00000396832 ELOA3BQ3SY89 546 aa21.64■■□□□ 1.05
CSNK1E-203ENST00000396832 ELOA3Q8NG57 546 aa21.64■■□□□ 1.05
CSNK1E-203ENST00000396832 SYT4Q9H2B2 425 aa21.64■■□□□ 1.05
CSNK1E-203ENST00000396832 LYRM4Q9HD34 91 aa21.64■■□□□ 1.05
CSNK1E-203ENST00000396832 SDK1Q7Z5N4 2213 aa21.64■■□□□ 1.05
CSNK1E-203ENST00000396832 IGKV1D-42A0A075B6H8 117 aa21.64■■□□□ 1.05
CSNK1E-203ENST00000396832 COLCA2A8K830 154 aa21.64■■□□□ 1.05
CSNK1E-203ENST00000396832 MAOAP21397 527 aa21.64■■□□□ 1.05
CSNK1E-203ENST00000396832 ECH1Q13011 328 aa21.64■■□□□ 1.05
CSNK1E-203ENST00000396832 OR13C8Q8NGS7 320 aa21.64■■□□□ 1.05
CSNK1E-203ENST00000396832 EDEM2Q9BV94 578 aa21.64■■□□□ 1.05
CSNK1E-203ENST00000396832 FAM96BQ9Y3D0 163 aa21.64■■□□□ 1.05
CSNK1E-203ENST00000396832 LINC01553A4QN01 128 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 ZNF208O43345 1280 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 ZNF432O94892 652 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 HLA-DQA2P01906 255 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 S100A8P05109 93 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 CELA2BP08218 269 aaPredicted RBP21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 ZNF28P17035 718 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 AVPR2P30518 371 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 PBX2P40425 430 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 ALG10Q5BKT4 473 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 NKAPLQ5M9Q1 402 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 RHOUQ7L0Q8 258 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 YAF2Q8IY57 180 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 TMED6Q8WW62 240 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 MCHR2Q969V1 340 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 SLC6A7Q99884 636 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 SELENOIQ9C0D9 397 aa21.63■■□□□ 1.05
CSNK1E-203ENST00000396832 TCEAL2Q9H3H9 227 aaPredicted RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms