RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 CLDN15P56746 228 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 TATDN3Q17R31 274 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 OR2W3Q7Z3T1 314 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 LILRA2Q8N149 483 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 GIMAP1Q8WWP7 306 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 IL1F10Q8WWZ1 152 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 ZNF649Q9BS31 505 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 OR14J1Q9UGF5 321 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 TUBAL3A6NHL2 446 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 AIPO00170 330 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 RNF4P78317 190 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 ASAH1Q13510 395 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 OR2G6Q5TZ20 316 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 CREB3L2Q70SY1 520 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 SLC35G3Q8N808 338 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 DTWD2Q8NBA8 298 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 ZIC5Q96T25 663 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 NUDT22Q9BRQ3 303 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 GPR87Q9BY21 358 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 LIN7CQ9NUP9 197 aaKnown RBP14.26□□□□□ -0.13
GNE-202ENST00000396594 ANKRD34BA5PLL1 514 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 NPIPB8E9PQR5 432 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 BMI1P35226 326 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 ISL1P61371 349 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 SSPNQ14714 243 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 SPCS2Q15005 226 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 TMEM200AQ86VY9 491 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 SPSB1Q96BD6 273 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 OR11A1Q9GZK7 315 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 POM121BA6NF01 834 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 AGAP14A8MT82 685 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 MBP02144 154 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 APOC3P02656 99 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 GIPP09681 153 aaPredicted RBP14.26□□□□□ -0.13
GNE-202ENST00000396594 HLA-DMAP28067 261 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 CCSMST1Q4G0I0 132 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 GLIPR1L1Q6UWM5 242 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 C16orf52Q8NHV5 167 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 NUDT16L1Q9BRJ7 211 aaKnown RBP14.26□□□□□ -0.13
GNE-202ENST00000396594 DUSP21Q9H596 190 aa14.26□□□□□ -0.13
GNE-202ENST00000396594 ECM29Q5VYK3 1845 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 NARSO43776 548 aaKnown RBP14.25□□□□□ -0.13
GNE-202ENST00000396594 RAD1O60671 282 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 UBE2MP61081 183 aaKnown RBP14.25□□□□□ -0.13
GNE-202ENST00000396594 LAIR1Q6GTX8 287 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 RIMKLAQ8IXN7 391 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 OR10J5Q8NHC4 309 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 LRRC61Q9BV99 259 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 CXCL16Q9H2A7 254 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 COA3Q9Y2R0 106 aaPredicted RBP14.25□□□□□ -0.13
GNE-202ENST00000396594 MYO5AQ9Y4I1 1855 aaKnown RBP14.25□□□□□ -0.13
GNE-202ENST00000396594 TEX51A0A1B0GUA7 166 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 PPP2CBP62714 309 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 PPP2CAP67775 309 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 FUT7Q11130 342 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 OR8B8Q15620 311 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 RTL8BQ17RB0 113 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 PRSS36Q5K4E3 855 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 C1orf174Q8IYL3 243 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 OR52N5Q8NH56 324 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 APOBEC3DQ96AK3 386 aaPredicted RBP14.25□□□□□ -0.13
GNE-202ENST00000396594 FGGYQ96C11 551 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 SMIM19Q96E16 107 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 DLL4Q9NR61 685 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 K7ESM1 405 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 SMAD9O15198 467 aaKnown RBP14.25□□□□□ -0.13
GNE-202ENST00000396594 PNLIPP16233 465 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 RAB13P51153 203 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 LYPD4Q6UWN0 246 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 TMIGD2Q96BF3 282 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 GNPNAT1Q96EK6 184 aaPredicted RBP14.25□□□□□ -0.13
GNE-202ENST00000396594 TAAR6Q96RI8 345 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 NIPSNAP1Q9BPW8 284 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 CXXC1Q9P0U4 656 aaPredicted RBP14.25□□□□□ -0.13
GNE-202ENST00000396594 TCRBV5S2A0A599 114 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 MT-ND4P03905 459 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 DUSP1P28562 367 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 PMPCAQ10713 525 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 LEXMQ3ZCV2 418 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 TRMT12Q53H54 448 aaKnown RBP14.25□□□□□ -0.13
GNE-202ENST00000396594 CD300LDQ6UXZ3 194 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 CALHM3Q86XJ0 350 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 SP7Q8TDD2 431 aaPredicted RBP14.25□□□□□ -0.13
GNE-202ENST00000396594 SLC38A1Q9H2H9 487 aa14.25□□□□□ -0.13
GNE-202ENST00000396594 STRAPQ9Y3F4 350 aaKnown RBP14.25□□□□□ -0.13
GNE-202ENST00000396594 M0R135 149 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 SOCS6O14544 535 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 STK17BO94768 372 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 TOXO94900 526 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 PEX11BO96011 259 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 CTSLP07711 333 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 METTL15P1P0C7V9 234 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 MAKP20794 623 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 SOX18P35713 384 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 ACKR1Q16570 336 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 NLRC3Q7RTR2 1065 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 PRSS42Q7Z5A4 293 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 ETFBKMTQ8IXQ9 262 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 NOXO1Q8NFA2 376 aa14.24□□□□□ -0.13
GNE-202ENST00000396594 ZNF799Q96GE5 643 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms