RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 NCCRP1Q6ZVX7 275 aaPredicted RBP13.43□□□□□ -0.26
GPC3-202ENST00000394299 SIAH3Q8IW03 269 aa13.43□□□□□ -0.26
GPC3-202ENST00000394299 DND1Q8IYX4 353 aaKnown RBP13.43□□□□□ -0.26
GPC3-202ENST00000394299 RBP7Q96R05 134 aa13.43□□□□□ -0.26
GPC3-202ENST00000394299 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.43□□□□□ -0.266e-9■□□□□ 8.2
GPC3-202ENST00000394299 SLITRK2Q9H156 845 aa13.43□□□□□ -0.26
GPC3-202ENST00000394299 AKAP7Q9P0M2 348 aaPredicted RBP13.43□□□□□ -0.26
GPC3-202ENST00000394299 RBMX2Q9Y388 322 aaKnown RBP13.43□□□□□ -0.26
GPC3-202ENST00000394299 ALG5Q9Y673 324 aa13.43□□□□□ -0.26
GPC3-202ENST00000394299 A0A1W2PNV4 684 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 CENPBD1B2RD01 187 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 FAM47E-STBD1D6RA91 191 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 SRSF10O75494 262 aaKnown RBP13.42□□□□□ -0.26
GPC3-202ENST00000394299 LIFP15018 202 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 MAPK3P27361 379 aaPredicted RBP13.42□□□□□ -0.26
GPC3-202ENST00000394299 CLRN1P58418 232 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 GPR85P60893 370 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 MRPL28Q13084 256 aaKnown RBP13.42□□□□□ -0.26
GPC3-202ENST00000394299 LINGO2Q7L985 606 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 PLPP7Q8NBV4 271 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 OR1J4Q8NGS1 313 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 ASB5Q8WWX0 329 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 ADAMTS14Q8WXS8 1223 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 ZNF775Q96BV0 537 aaPredicted RBP13.42□□□□□ -0.26
GPC3-202ENST00000394299 ZC3HAV1LQ96H79 300 aaKnown RBP13.42□□□□□ -0.26
GPC3-202ENST00000394299 FYTTD1Q96QD9 318 aaKnown RBP13.42□□□□□ -0.26
GPC3-202ENST00000394299 UCN2Q96RP3 112 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 SH2D2AQ9NP31 389 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 CAMK2AQ9UQM7 478 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 N6AMT1Q9Y5N5 214 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 OR2M5A3KFT3 312 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 JMJD7P0C870 316 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 ZNF883P0CG24 379 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 PGA4P0DJD7 388 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 PGA3P0DJD8 388 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 ANOS1P23352 680 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 MAP2K6P52564 334 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 PLA2G2CQ5R387 149 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 TMPPEQ6ZT21 453 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 OR10S1Q8NGN2 331 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 FANCFQ9NPI8 374 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 G6PC2Q9NQR9 355 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 FARSAQ9Y285 508 aaKnown RBP13.42□□□□□ -0.26
GPC3-202ENST00000394299 MRPS18BQ9Y676 258 aaKnown RBP13.42□□□□□ -0.26
GPC3-202ENST00000394299 CACNG2Q9Y698 323 aa13.42□□□□□ -0.26
GPC3-202ENST00000394299 TRAV6A0A075B6T7 132 aa13.41□□□□□ -0.26
GPC3-202ENST00000394299 TMEM269A0A1B0GVZ9 245 aa13.41□□□□□ -0.26
GPC3-202ENST00000394299 A0A1W2PQ72 361 aa13.41□□□□□ -0.26
GPC3-202ENST00000394299 ZNF43P17038 809 aa13.41□□□□□ -0.26
GPC3-202ENST00000394299 SLC6A1P30531 599 aa13.41□□□□□ -0.26
GPC3-202ENST00000394299 MMP15P51511 669 aa13.41□□□□□ -0.26
GPC3-202ENST00000394299 CCR9P51686 369 aa13.41□□□□□ -0.26
GPC3-202ENST00000394299 EFNB2P52799 333 aa13.41□□□□□ -0.26
GPC3-202ENST00000394299 CLDN20P56880 219 aa13.41□□□□□ -0.26
GPC3-202ENST00000394299 PCK2Q16822 640 aa13.41□□□□□ -0.26
GPC3-202ENST00000394299 DNM1P34Q6PK57 102 aa13.41□□□□□ -0.26
GPC3-202ENST00000394299 TOMM5Q8N4H5 51 aa13.41□□□□□ -0.26
GPC3-202ENST00000394299 OR51D1Q8NGF3 324 aa13.41□□□□□ -0.26
GPC3-202ENST00000394299 SLC25A44Q96H78 314 aaPredicted RBP13.41□□□□□ -0.26
GPC3-202ENST00000394299 RANGRFQ9HD47 186 aaPredicted RBP13.41□□□□□ -0.26
GPC3-202ENST00000394299 KLK11Q9UBX7 282 aa13.41□□□□□ -0.26
GPC3-202ENST00000394299 HMX3A6NHT5 357 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 MT-ND4P03905 459 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 ITGA5P08648 1049 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 CDK2P24941 298 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 EIF1P41567 113 aaKnown RBP13.4□□□□□ -0.26
GPC3-202ENST00000394299 CCR6P51684 374 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 CLDN17P56750 224 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 CD83Q01151 205 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 ZNF528Q3MIS6 628 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 PLA1AQ53H76 456 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 TIGD3Q6B0B8 471 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 CFAP77Q6ZQR2 320 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 YRDCQ86U90 279 aaKnown RBP13.4□□□□□ -0.26
GPC3-202ENST00000394299 BIVMQ86UB2 503 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 GTPBP8Q8N3Z3 284 aaPredicted RBP13.4□□□□□ -0.26
GPC3-202ENST00000394299 ZNF454Q8N9F8 522 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 OR51A2Q8NGJ7 313 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 MIB2Q96AX9 1013 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 MARVELD1Q9BSK0 173 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 TAS2R4Q9NYW5 299 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 NPAP1Q9NZP6 1156 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 ZNF221Q9UK13 617 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 OR52A1Q9UKL2 312 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 FOXJ3Q9UPW0 622 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 DHDHQ9UQ10 334 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 R4GMQ9 66 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 NPIPB13A6NJU9 1138 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 NPIPB4C9JG80 1138 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 P2RY10O00398 339 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 ORC5O43913 435 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 ZNF432O94892 652 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 RAF1P04049 648 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 QDPRP09417 244 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 H2BFMP0C1H6 154 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 RFPL3SP0C7P2 107 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 ADH6P28332 368 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 LAP3P28838 519 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 PTH2RP49190 550 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 HYAL4Q2M3T9 481 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms