RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 CD1AP06126 327 aa7.66□□□□□ -1.18
TDP1-203ENST00000393454 H2BFMP0C1H6 154 aa7.66□□□□□ -1.18
TDP1-203ENST00000393454 ZNF24P17028 368 aa7.66□□□□□ -1.18
TDP1-203ENST00000393454 ZNF84P51523 738 aa7.66□□□□□ -1.18
TDP1-203ENST00000393454 ROM1Q03395 351 aa7.66□□□□□ -1.18
TDP1-203ENST00000393454 DCTN2Q13561 401 aaKnown RBP7.66□□□□□ -1.18
TDP1-203ENST00000393454 INAQ16352 499 aa7.66□□□□□ -1.18
TDP1-203ENST00000393454 BCL2A1Q16548 175 aa7.66□□□□□ -1.18
TDP1-203ENST00000393454 ABLIM2Q6H8Q1 611 aa7.66□□□□□ -1.18
TDP1-203ENST00000393454 PAMR1Q6UXH9 720 aa7.66□□□□□ -1.18
TDP1-203ENST00000393454 C20orf196Q8IYI0 205 aa7.66□□□□□ -1.18
TDP1-203ENST00000393454 OR2G2Q8NGZ5 317 aa7.66□□□□□ -1.18
TDP1-203ENST00000393454 S100ZQ8WXG8 99 aa7.66□□□□□ -1.18
TDP1-203ENST00000393454 INTS12Q96CB8 462 aaKnown RBP7.66□□□□□ -1.18
TDP1-203ENST00000393454 MED18Q9BUE0 208 aa7.66□□□□□ -1.18
TDP1-203ENST00000393454 BARHL1Q9BZE3 327 aa7.66□□□□□ -1.18
TDP1-203ENST00000393454 NXF2Q9GZY0 626 aaKnown RBP7.66□□□□□ -1.18
TDP1-203ENST00000393454 COMMD4Q9H0A8 199 aa7.66□□□□□ -1.18
TDP1-203ENST00000393454 HMG20AQ9NP66 347 aa7.66□□□□□ -1.18
TDP1-203ENST00000393454 FRRS1LQ9P0K9 344 aa7.66□□□□□ -1.18
TDP1-203ENST00000393454 CRNNQ9UBG3 495 aaPredicted RBP7.66□□□□□ -1.18
TDP1-203ENST00000393454 LRP12Q9Y561 859 aa7.66□□□□□ -1.18
TDP1-203ENST00000393454 ASPMQ8IZT6 3477 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 A0A087WV48 116 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 HSPB2A8KAH6 182 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 CLDN25C9JDP6 229 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 H3BSH0 61 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 RGS5O15539 181 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 DHHO43323 396 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 INHBBP09529 407 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 ZNF846Q147U1 533 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 TAF13Q15543 124 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 HSPB2Q16082 182 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 PCK2Q16822 640 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 YIF1BQ5BJH7 314 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 ZMAT1Q5H9K5 638 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 ZNF544Q6NX49 715 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.65□□□□□ -1.18
TDP1-203ENST00000393454 GPR137CQ8N3F9 429 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 PRSS35Q8N3Z0 413 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 ST7LQ8TDW4 575 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 RNF128Q8TEB7 428 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 RNF166Q96A37 237 aaPredicted RBP7.65□□□□□ -1.18
TDP1-203ENST00000393454 SLAMF6Q96DU3 332 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 CEP19Q96LK0 163 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 DACH2Q96NX9 599 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 DCBLD2Q96PD2 775 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 OR14A2Q96R54 314 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 PPIL3Q9H2H8 161 aaKnown RBP7.65□□□□□ -1.18
TDP1-203ENST00000393454 C1orf198Q9H425 327 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 SMURF1Q9HCE7 757 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 B3GAT2Q9NPZ5 323 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 POLE4Q9NR33 117 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 PAQR5Q9NXK6 330 aaPredicted RBP7.65□□□□□ -1.18
TDP1-203ENST00000393454 CYB5R1Q9UHQ9 305 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 RCE1Q9Y256 329 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 PEX16Q9Y5Y5 336 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 A3GALT2U3KPV4 340 aa7.65□□□□□ -1.18
TDP1-203ENST00000393454 SHISA3A0PJX4 238 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 J3QRK9 145 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 CTDSP2O14595 271 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 MRPL33O75394 65 aaKnown RBP7.64□□□□□ -1.19
TDP1-203ENST00000393454 KRT33AO76009 404 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 BMP4P12644 408 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 MSR1P21757 451 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 NTF4P34130 210 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 MAGEB1P43366 347 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 MTNR1BP49286 362 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 RPS11P62280 158 aaKnown RBP eCLIP7.64□□□□□ -1.19
TDP1-203ENST00000393454 ZNF829Q3KNS6 432 aaPredicted RBP7.64□□□□□ -1.19
TDP1-203ENST00000393454 C10orf128Q5T292 105 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 C16orf87Q6PH81 154 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 KLHL24Q6TFL4 600 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 LINC00299Q6ZSB3 139 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 MCEMP1Q8IX19 187 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 RDH10Q8IZV5 341 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 LRRC18Q8N456 261 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 FNDC9Q8TBE3 224 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 MAP6Q96JE9 813 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 WDR12Q9GZL7 423 aaKnown RBP7.64□□□□□ -1.19
TDP1-203ENST00000393454 ZDHHC11Q9H8X9 412 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 CALHM2Q9HA72 323 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 BRD7Q9NPI1 651 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 EMC3Q9P0I2 261 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 SPRR3Q9UBC9 169 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 ASH2LQ9UBL3 628 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 FOXD3Q9UJU5 478 aaPredicted RBP7.64□□□□□ -1.19
TDP1-203ENST00000393454 GDF2Q9UK05 429 aaPredicted RBP7.64□□□□□ -1.19
TDP1-203ENST00000393454 FBXL3Q9UKT7 428 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 CLEC4AQ9UMR7 237 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 NOSIPQ9Y314 301 aaKnown RBP7.64□□□□□ -1.19
TDP1-203ENST00000393454 EMC9Q9Y3B6 208 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 MSRB2Q9Y3D2 182 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 UGT2A1Q9Y4X1 527 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 LHFPL6Q9Y693 200 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 CEP295Q9C0D2 2601 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 ZFHX4Q86UP3 3567 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 A0A075B6Q4 140 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 ACOD1A6NK06 481 aa7.64□□□□□ -1.19
TDP1-203ENST00000393454 TMEM212A6NML5 194 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms