RNA–Protein interactions for RNA: ENST00000390996.1

RNU6-1009P-201, Transcript of RNA, U6 small nuclear 1009, pseudogene, humanhuman

BASIC

Gene RNU6-1009P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1009P-201ENST00000390996 RBM43Q6ZSC3 357 aaKnown RBP0.19□□□□□ -2.38
RNU6-1009P-201ENST00000390996 MAIP1Q8WWC4 291 aa0.19□□□□□ -2.38
RNU6-1009P-201ENST00000390996 NTAN1Q96AB6 310 aa0.19□□□□□ -2.38
RNU6-1009P-201ENST00000390996 CXorf40BQ96DE9 158 aa0.19□□□□□ -2.38
RNU6-1009P-201ENST00000390996 IGHV3-49A0A0A0MS15 119 aa0.18□□□□□ -2.38
RNU6-1009P-201ENST00000390996 CCDC22O60826 627 aa0.18□□□□□ -2.38
RNU6-1009P-201ENST00000390996 EIF3GO75821 320 aaKnown RBP eCLIP0.18□□□□□ -2.38
RNU6-1009P-201ENST00000390996 CCNB1P14635 433 aa0.18□□□□□ -2.38
RNU6-1009P-201ENST00000390996 RAB3BP20337 219 aa0.18□□□□□ -2.38
RNU6-1009P-201ENST00000390996 CYP2F1P24903 491 aa0.18□□□□□ -2.38
RNU6-1009P-201ENST00000390996 EPS15P42566 896 aa0.18□□□□□ -2.38
RNU6-1009P-201ENST00000390996 PDZK1IP1Q13113 114 aa0.18□□□□□ -2.38
RNU6-1009P-201ENST00000390996 MESDQ14696 234 aa0.18□□□□□ -2.38
RNU6-1009P-201ENST00000390996 DPYSL2Q16555 572 aa0.18□□□□□ -2.38
RNU6-1009P-201ENST00000390996 C10orf120Q5SQS8 335 aa0.18□□□□□ -2.38
RNU6-1009P-201ENST00000390996 AMMECR1LQ6DCA0 310 aa0.18□□□□□ -2.38
RNU6-1009P-201ENST00000390996 ZNF470Q6ECI4 717 aa0.18□□□□□ -2.38
RNU6-1009P-201ENST00000390996 CCDC80Q76M96 950 aa0.18□□□□□ -2.38
RNU6-1009P-201ENST00000390996 MUC7Q8TAX7 377 aa0.18□□□□□ -2.38
RNU6-1009P-201ENST00000390996 CHCHD7Q9BUK0 85 aa0.18□□□□□ -2.38
RNU6-1009P-201ENST00000390996 LRRN3Q9H3W5 708 aa0.18□□□□□ -2.38
RNU6-1009P-201ENST00000390996 TMED5Q9Y3A6 229 aa0.18□□□□□ -2.38
RNU6-1009P-201ENST00000390996 F8WDY8 70 aa0.17□□□□□ -2.38
RNU6-1009P-201ENST00000390996 AQP9O43315 295 aa0.17□□□□□ -2.38
RNU6-1009P-201ENST00000390996 ZNF73O43830 326 aaPredicted RBP0.17□□□□□ -2.38
RNU6-1009P-201ENST00000390996 CALM1P0DP23 149 aa0.17□□□□□ -2.38
RNU6-1009P-201ENST00000390996 CALM2P0DP24 149 aa0.17□□□□□ -2.38
RNU6-1009P-201ENST00000390996 CALM3P0DP25 149 aa0.17□□□□□ -2.38
RNU6-1009P-201ENST00000390996 LAP3P28838 519 aa0.17□□□□□ -2.38
RNU6-1009P-201ENST00000390996 RPL13AP40429 203 aaKnown RBP0.17□□□□□ -2.38
RNU6-1009P-201ENST00000390996 ARFIP1P53367 373 aa0.17□□□□□ -2.38
RNU6-1009P-201ENST00000390996 PTPN20Q4JDL3 420 aa0.17□□□□□ -2.38
RNU6-1009P-201ENST00000390996 CPTPQ5TA50 214 aa0.17□□□□□ -2.38
RNU6-1009P-201ENST00000390996 TMED8Q6PL24 325 aaPredicted RBP0.17□□□□□ -2.38
RNU6-1009P-201ENST00000390996 EGFL6Q8IUX8 553 aa0.17□□□□□ -2.38
RNU6-1009P-201ENST00000390996 METTL13Q8N6R0 699 aa0.17□□□□□ -2.38
RNU6-1009P-201ENST00000390996 HSD17B11Q8NBQ5 300 aa0.17□□□□□ -2.38
RNU6-1009P-201ENST00000390996 OR5T1Q8NG75 326 aa0.17□□□□□ -2.38
RNU6-1009P-201ENST00000390996 RNF145Q96MT1 663 aa0.17□□□□□ -2.38
RNU6-1009P-201ENST00000390996 GGTLC1Q9BX51 225 aa0.17□□□□□ -2.38
RNU6-1009P-201ENST00000390996 IGKV1D-43A0A0B4J1Z2 117 aa0.16□□□□□ -2.38
RNU6-1009P-201ENST00000390996 AIFM1O95831 613 aa0.16□□□□□ -2.38
RNU6-1009P-201ENST00000390996 IGHV3-11P01762 117 aa0.16□□□□□ -2.38
RNU6-1009P-201ENST00000390996 ATP1B3P54709 279 aa0.16□□□□□ -2.38
RNU6-1009P-201ENST00000390996 UBE2NP61088 152 aaKnown RBP0.16□□□□□ -2.38
RNU6-1009P-201ENST00000390996 BIKQ13323 160 aa0.16□□□□□ -2.38
RNU6-1009P-201ENST00000390996 FILIP1LQ4L180 1135 aa0.16□□□□□ -2.38
RNU6-1009P-201ENST00000390996 TMEM41BQ5BJD5 291 aa0.16□□□□□ -2.38
RNU6-1009P-201ENST00000390996 BLOC1S2Q6QNY1 142 aa0.16□□□□□ -2.38
RNU6-1009P-201ENST00000390996 ENPP6Q6UWR7 440 aa0.16□□□□□ -2.38
RNU6-1009P-201ENST00000390996 STK40Q8N2I9 435 aa0.16□□□□□ -2.38
RNU6-1009P-201ENST00000390996 MRPL43Q8N983 215 aaKnown RBP0.16□□□□□ -2.38
RNU6-1009P-201ENST00000390996 PIK3IP1Q96FE7 263 aa0.16□□□□□ -2.38
RNU6-1009P-201ENST00000390996 GALNT14Q96FL9 552 aa0.16□□□□□ -2.38
RNU6-1009P-201ENST00000390996 TGM7Q96PF1 710 aa0.16□□□□□ -2.38
RNU6-1009P-201ENST00000390996 HSD17B10Q99714 261 aaKnown RBP0.16□□□□□ -2.38
RNU6-1009P-201ENST00000390996 GCOM2Q9BZD3 368 aaPredicted RBP0.16□□□□□ -2.38
RNU6-1009P-201ENST00000390996 CCL21O00585 134 aa0.15□□□□□ -2.39
RNU6-1009P-201ENST00000390996 CLDN3O15551 220 aa0.15□□□□□ -2.39
RNU6-1009P-201ENST00000390996 OR7A10O76100 309 aa0.15□□□□□ -2.39
RNU6-1009P-201ENST00000390996 CPSF4O95639 269 aaKnown RBP0.15□□□□□ -2.39
RNU6-1009P-201ENST00000390996 CGB3P0DN86 165 aa0.15□□□□□ -2.39
RNU6-1009P-201ENST00000390996 YAP1P46937 504 aaKnown RBP0.15□□□□□ -2.39
RNU6-1009P-201ENST00000390996 RABIFP47224 123 aa0.15□□□□□ -2.39
RNU6-1009P-201ENST00000390996 TPBGQ13641 420 aa0.15□□□□□ -2.39
RNU6-1009P-201ENST00000390996 KLHL38Q2WGJ6 581 aa0.15□□□□□ -2.39
RNU6-1009P-201ENST00000390996 OR11H7Q8NGC8 314 aa0.15□□□□□ -2.39
RNU6-1009P-201ENST00000390996 OR10R2Q8NGX6 335 aa0.15□□□□□ -2.39
RNU6-1009P-201ENST00000390996 OR2G2Q8NGZ5 317 aa0.15□□□□□ -2.39
RNU6-1009P-201ENST00000390996 TRIM44Q96DX7 344 aaPredicted RBP0.15□□□□□ -2.39
RNU6-1009P-201ENST00000390996 IGF2BP2-AS1Q96M15 143 aa0.15□□□□□ -2.39
RNU6-1009P-201ENST00000390996 DUSP21Q9H596 190 aa0.15□□□□□ -2.39
RNU6-1009P-201ENST00000390996 BFARQ9NZS9 450 aa0.15□□□□□ -2.39
RNU6-1009P-201ENST00000390996 RPH3ALQ9UNE2 315 aa0.15□□□□□ -2.39
RNU6-1009P-201ENST00000390996 ATP6V0A2Q9Y487 856 aa0.15□□□□□ -2.39
RNU6-1009P-201ENST00000390996 MFHAS1Q9Y4C4 1052 aa0.15□□□□□ -2.39
RNU6-1009P-201ENST00000390996 LTBP2Q14767 1821 aa0.15□□□□□ -2.39
RNU6-1009P-201ENST00000390996 POLR2DO15514 142 aaKnown RBP0.14□□□□□ -2.39
RNU6-1009P-201ENST00000390996 FCMRO60667 390 aa0.14□□□□□ -2.39
RNU6-1009P-201ENST00000390996 SLC22A5O76082 557 aa0.14□□□□□ -2.39
RNU6-1009P-201ENST00000390996 CD3GP09693 182 aa0.14□□□□□ -2.39
RNU6-1009P-201ENST00000390996 CCND2P30279 289 aa0.14□□□□□ -2.39
RNU6-1009P-201ENST00000390996 CCR1P32246 355 aa0.14□□□□□ -2.39
RNU6-1009P-201ENST00000390996 ATP5C1P36542 298 aaKnown RBP0.14□□□□□ -2.39
RNU6-1009P-201ENST00000390996 CLINT1Q14677 625 aa0.14□□□□□ -2.39
RNU6-1009P-201ENST00000390996 YIF1BQ5BJH7 314 aa0.14□□□□□ -2.39
RNU6-1009P-201ENST00000390996 APOBEC3HQ6NTF7 200 aaKnown RBP0.14□□□□□ -2.39
RNU6-1009P-201ENST00000390996 CENPLQ8N0S6 344 aaPredicted RBP0.14□□□□□ -2.39
RNU6-1009P-201ENST00000390996 HSFY1Q96LI6 401 aa0.14□□□□□ -2.39
RNU6-1009P-201ENST00000390996 KCNK16Q96T55 309 aa0.14□□□□□ -2.39
RNU6-1009P-201ENST00000390996 GPA33Q99795 319 aa0.14□□□□□ -2.39
RNU6-1009P-201ENST00000390996 CSNK1G1Q9HCP0 422 aa0.14□□□□□ -2.39
RNU6-1009P-201ENST00000390996 RAB18Q9NP72 206 aa0.14□□□□□ -2.39
RNU6-1009P-201ENST00000390996 RPRD2Q5VT52 1461 aaKnown RBP0.14□□□□□ -2.39
RNU6-1009P-201ENST00000390996 TRIM64A6NGJ6 449 aa0.13□□□□□ -2.39
RNU6-1009P-201ENST00000390996 TRIM64BA6NI03 449 aa0.13□□□□□ -2.39
RNU6-1009P-201ENST00000390996 OR5H1A6NKK0 313 aa0.13□□□□□ -2.39
RNU6-1009P-201ENST00000390996 GPR89AB7ZAQ6 455 aa0.13□□□□□ -2.39
RNU6-1009P-201ENST00000390996 PRAMEF26H0Y7S4 382 aa0.13□□□□□ -2.39
RNU6-1009P-201ENST00000390996 C15orf65H3BRN8 121 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms