RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 RHEBL1Q8TAI7 183 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 PIFOQ8TCI5 191 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 MAGEE2Q8TD90 523 aaPredicted RBP0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 CXorf40AQ8TE69 158 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 TBRG4Q969Z0 631 aaKnown RBP eCLIP0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 GALNT14Q96FL9 552 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 IP6K3Q96PC2 410 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 MS4A4EQ96PG1 132 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 TMEM237Q96Q45 408 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 COPS8Q99627 209 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 RHOXF2Q9BQY4 288 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 THUMPD2Q9BTF0 503 aaKnown RBP0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 OR52D1Q9H346 318 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 DBNDD1Q9H9R9 158 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 CSNK1G1Q9HCP0 422 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 C21orf62Q9NYP8 219 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 SLC7A8Q9UHI5 535 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 SH3BGRL2Q9UJC5 107 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 ODF2LQ9ULJ1 636 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 POLDIP2Q9Y2S7 368 aa0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 AHDC1Q5TGY3 1603 aaPredicted RBP0.48□□□□□ -2.33
SNORD28B-201ENST00000390993 TNS2Q63HR2 1409 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 MAPK8IP3Q9UPT6 1336 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 IGLV3-22A0A075B6J6 115 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 IGHV3-49A0A0A0MS15 119 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 IGHV1-3A0A0C4DH29 117 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 IGHV7-4-1A0A0J9YVY3 117 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 MBLAC1A4D2B0 266 aaPredicted RBP0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 METTL21EPA6NDL7 271 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 GOLGA6L4A6NEF3 574 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 E7EQL1 145 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 H0YJW9 148 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 MFNGO00587 321 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 FCMRO60667 390 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 REM1O75628 298 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 PALMO75781 387 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 OR7A10O76100 309 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 IGLV7-43P04211 117 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 UGT2B4P06133 528 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 PFN1P07737 140 aaKnown RBP0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 OR8U9P0C7N5 309 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 IFI30P13284 250 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 RAB3AP20336 220 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 IFNA8P32881 189 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 FBXW4P57775 412 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 KRTAP12-1P59990 96 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 CCNA1P78396 465 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 CDK5Q00535 292 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 TNFRSF9Q07011 255 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 PPIDQ08752 370 aaKnown RBP0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 PDK4Q16654 411 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 IMMTQ16891 758 aaKnown RBP0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 USH1GQ495M9 461 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 PYDC2Q56P42 97 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 AVPI1Q5T686 147 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 CPTPQ5TA50 214 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 TTC23Q5W5X9 447 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 APOBEC3HQ6NTF7 200 aaKnown RBP0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 PRSS54Q6PEW0 395 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 CNSTQ6PJW8 725 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 PLET1Q6UQ28 207 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 C16orf47Q6ZP98 133 aaPredicted RBP0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 Q6ZPB1 254 aaPredicted RBP0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 TMEM136Q6ZRR5 245 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 ZSCAN30Q86W11 494 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 TMEM123Q8N131 208 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 ZNF713Q8N859 430 aaPredicted RBP0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 ANKFN1Q8N957 763 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 FAM83FQ8NEG4 500 aaPredicted RBP0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 OR10R2Q8NGX6 335 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 UBE2Q2Q8WVN8 375 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 RLN3Q8WXF3 142 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 PIBF1Q8WXW3 757 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 EMG1Q92979 244 aaKnown RBP0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 DCPSQ96C86 337 aaKnown RBP0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 MRPL38Q96DV4 380 aaKnown RBP0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 NEURL3Q96EH8 262 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 SERPINB12Q96P63 405 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 NPY6RQ99463 290 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 PKMYT1Q99640 499 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 SEC22CQ9BRL7 303 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 SLC39A3Q9BRY0 314 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 TCHPQ9BT92 498 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 CHCHD7Q9BUK0 85 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 PPA2Q9H2U2 334 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 RIBC2Q9H4K1 309 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 ZSCAN16Q9H4T2 348 aaPredicted RBP0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 NIPAL2Q9H841 368 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 FN3KRPQ9HA64 309 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 EDA2RQ9HAV5 297 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 NMRAL1Q9HBL8 299 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 KCNJ16Q9NPI9 418 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 ASF1BQ9NVP2 202 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 YARS2Q9Y2Z4 477 aaKnown RBP0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 MEMO1Q9Y316 297 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 GOLT1BQ9Y3E0 138 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 FBN3Q75N90 2809 aa0.47□□□□□ -2.33
SNORD28B-201ENST00000390993 SVILO95425 2214 aa0.46□□□□□ -2.34
SNORD28B-201ENST00000390993 ZBED9Q6R2W3 1325 aa0.46□□□□□ -2.34
SNORD28B-201ENST00000390993 CEACAM18A8MTB9 384 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms