RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 SMPD2O60906 423 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 SCG5P05408 212 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 SOD3P08294 240 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 GAAP10253 952 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 ZNF35P13682 527 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 TTKP33981 857 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 DAPP51397 102 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 ART1P52961 327 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 PSG4Q00888 419 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 SNTB2Q13425 540 aaKnown RBP13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 DAG1Q14118 895 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 CRMP1Q14194 572 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 GINS1Q14691 196 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 KCNMB1Q16558 191 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 ZNF362Q5T0B9 420 aaPredicted RBP13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 UGT2A3Q6UWM9 527 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 MUC15Q8N387 334 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 ICA1LQ8NDH6 482 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 PROKR2Q8NFJ6 384 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 OR10H5Q8NGA6 315 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 IGFBPL1Q8WX77 278 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 DDOQ99489 341 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 TRAF4Q9BUZ4 470 aaPredicted RBP13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 RBM4Q9BWF3 364 aaKnown RBP13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 OSBPL10Q9BXB5 764 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 GRIP2Q9C0E4 1043 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 OR2H1Q9GZK4 316 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 ZNF442Q9H7R0 627 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 SLC25A19Q9HC21 320 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 CBLN4Q9NTU7 201 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 OAZ3Q9UMX2 235 aa13.02□□□□□ -0.33
IGHV3-53-201ENST00000390627 PLCE1Q9P212 2302 aa13.01□□□□□ -0.33
IGHV3-53-201ENST00000390627 MPZL1O95297 269 aa13.01□□□□□ -0.33
IGHV3-53-201ENST00000390627 SNAP29O95721 258 aa13.01□□□□□ -0.33
IGHV3-53-201ENST00000390627 HLA-DQA2P01906 255 aa13.01□□□□□ -0.33
IGHV3-53-201ENST00000390627 HMGN1P05114 100 aa13.01□□□□□ -0.33
IGHV3-53-201ENST00000390627 PAICSP22234 425 aaKnown RBP13.01□□□□□ -0.33
IGHV3-53-201ENST00000390627 NR4A1P22736 598 aa13.01□□□□□ -0.33
IGHV3-53-201ENST00000390627 STOMP27105 288 aa13.01□□□□□ -0.33
IGHV3-53-201ENST00000390627 APEX1P27695 318 aaKnown RBP13.01□□□□□ -0.33
IGHV3-53-201ENST00000390627 SLC25A1P53007 311 aa13.01□□□□□ -0.33
IGHV3-53-201ENST00000390627 RPS23P62266 143 aaKnown RBP13.01□□□□□ -0.33
IGHV3-53-201ENST00000390627 ESRRGP62508 458 aa13.01□□□□□ -0.33
IGHV3-53-201ENST00000390627 CDK5Q00535 292 aa13.01□□□□□ -0.33
IGHV3-53-201ENST00000390627 HGFACQ04756 655 aa13.01□□□□□ -0.33
IGHV3-53-201ENST00000390627 KDM4DQ6B0I6 523 aa13.01□□□□□ -0.33
IGHV3-53-201ENST00000390627 KRT80Q6KB66 452 aa13.01□□□□□ -0.33
IGHV3-53-201ENST00000390627 VHLLQ6RSH7 139 aa13.01□□□□□ -0.33
IGHV3-53-201ENST00000390627 SLC26A10Q8NG04 563 aa13.01□□□□□ -0.33
IGHV3-53-201ENST00000390627 AKR7LQ8NHP1 331 aa13.01□□□□□ -0.33
IGHV3-53-201ENST00000390627 STMN2Q93045 179 aa13.01□□□□□ -0.33
IGHV3-53-201ENST00000390627 PKP2Q99959 881 aa13.01□□□□□ -0.33
IGHV3-53-201ENST00000390627 PRRG3Q9BZD7 231 aa13.01□□□□□ -0.33
IGHV3-53-201ENST00000390627 WNT5BQ9H1J7 359 aa13.01□□□□□ -0.33
IGHV3-53-201ENST00000390627 S100A14Q9HCY8 104 aa13.01□□□□□ -0.33
IGHV3-53-201ENST00000390627 ASH2LQ9UBL3 628 aa13.01□□□□□ -0.33
IGHV3-53-201ENST00000390627 SAC3D1A6NKF1 404 aa13□□□□□ -0.33
IGHV3-53-201ENST00000390627 SGCEO43556 437 aa13□□□□□ -0.33
IGHV3-53-201ENST00000390627 DOK2O60496 412 aa13□□□□□ -0.33
IGHV3-53-201ENST00000390627 COX5BP10606 129 aa13□□□□□ -0.33
IGHV3-53-201ENST00000390627 BMP4P12644 408 aa13□□□□□ -0.33
IGHV3-53-201ENST00000390627 IGFBP5P24593 272 aa13□□□□□ -0.33
IGHV3-53-201ENST00000390627 GDI2P50395 445 aaKnown RBP13□□□□□ -0.33
IGHV3-53-201ENST00000390627 BLVRAP53004 296 aa13□□□□□ -0.33
IGHV3-53-201ENST00000390627 CRISP1P54107 249 aa13□□□□□ -0.33
IGHV3-53-201ENST00000390627 NKX6-1P78426 367 aaPredicted RBP13□□□□□ -0.33
IGHV3-53-201ENST00000390627 TEKQ02763 1124 aa13□□□□□ -0.33
IGHV3-53-201ENST00000390627 ACSM5Q6NUN0 579 aa13□□□□□ -0.33
IGHV3-53-201ENST00000390627 ZSCAN2Q7Z7L9 614 aaPredicted RBP13□□□□□ -0.33
IGHV3-53-201ENST00000390627 LRRC75A-AS1Q8N1F1 130 aa13□□□□□ -0.33
IGHV3-53-201ENST00000390627 CPEB3Q8NE35 698 aaKnown RBP13□□□□□ -0.33
IGHV3-53-201ENST00000390627 OR9Q1Q8NGQ5 310 aa13□□□□□ -0.33
IGHV3-53-201ENST00000390627 PLEKHA8Q96JA3 519 aa13□□□□□ -0.33
IGHV3-53-201ENST00000390627 RBM4BQ9BQ04 359 aaKnown RBP13□□□□□ -0.33
IGHV3-53-201ENST00000390627 GSX2Q9BZM3 304 aa13□□□□□ -0.33
IGHV3-53-201ENST00000390627 NMNAT2Q9BZQ4 307 aa13□□□□□ -0.33
IGHV3-53-201ENST00000390627 CXXC4Q9H2H0 198 aa13□□□□□ -0.33
IGHV3-53-201ENST00000390627 PLEK2Q9NYT0 353 aa13□□□□□ -0.33
IGHV3-53-201ENST00000390627 KCNG2Q9UJ96 466 aa13□□□□□ -0.33
IGHV3-53-201ENST00000390627 NDRG4Q9ULP0 352 aaKnown RBP13□□□□□ -0.33
IGHV3-53-201ENST00000390627 FAM171A2A8MVW0 826 aa12.99□□□□□ -0.33
IGHV3-53-201ENST00000390627 OVOL3O00110 214 aa12.99□□□□□ -0.33
IGHV3-53-201ENST00000390627 SURF4O15260 269 aa12.99□□□□□ -0.33
IGHV3-53-201ENST00000390627 GPANK1O95872 356 aa12.99□□□□□ -0.33
IGHV3-53-201ENST00000390627 OR4A8P0C604 315 aa12.99□□□□□ -0.33
IGHV3-53-201ENST00000390627 CCL2P13500 99 aa12.99□□□□□ -0.33
IGHV3-53-201ENST00000390627 PAX1P15863 534 aa12.99□□□□□ -0.33
IGHV3-53-201ENST00000390627 ZNF823P16415 610 aa12.99□□□□□ -0.33
IGHV3-53-201ENST00000390627 SPI1P17947 270 aa12.99□□□□□ -0.33
IGHV3-53-201ENST00000390627 CCNOP22674 350 aa12.99□□□□□ -0.33
IGHV3-53-201ENST00000390627 PYCR1P32322 319 aa12.99□□□□□ -0.33
IGHV3-53-201ENST00000390627 THBS4P35443 961 aa12.99□□□□□ -0.33
IGHV3-53-201ENST00000390627 GLRXP35754 106 aa12.99□□□□□ -0.33
IGHV3-53-201ENST00000390627 SERPINF1P36955 418 aa12.99□□□□□ -0.33
IGHV3-53-201ENST00000390627 HTR5AP47898 357 aa12.99□□□□□ -0.33
IGHV3-53-201ENST00000390627 ADIPOQQ15848 244 aa12.99□□□□□ -0.33
IGHV3-53-201ENST00000390627 MEP1BQ16820 701 aa12.99□□□□□ -0.33
IGHV3-53-201ENST00000390627 C11orf71Q6IPW1 123 aa12.99□□□□□ -0.33
IGHV3-53-201ENST00000390627 ZNF774Q6NX45 483 aa12.99□□□□□ -0.33
IGHV3-53-201ENST00000390627 UNQ6126/PRO20091Q6UXV3 157 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms