RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 RNF133Q8WVZ7 376 aa22.42■■□□□ 1.18
SHOX2-201ENST00000389589 MCHR2Q969V1 340 aa22.42■■□□□ 1.18
SHOX2-201ENST00000389589 ORAI1Q96D31 301 aa22.42■■□□□ 1.18
SHOX2-201ENST00000389589 FER1L6-AS2Q96M78 137 aa22.42■■□□□ 1.18
SHOX2-201ENST00000389589 KCNJ15Q99712 375 aa22.42■■□□□ 1.18
SHOX2-201ENST00000389589 UTP23Q9BRU9 249 aaKnown RBP22.42■■□□□ 1.18
SHOX2-201ENST00000389589 CYB5R1Q9UHQ9 305 aa22.42■■□□□ 1.18
SHOX2-201ENST00000389589 IFITM5A6NNB3 132 aa22.42■■□□□ 1.18
SHOX2-201ENST00000389589 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.42■■□□□ 1.18
SHOX2-201ENST00000389589 FTH1P19P0C7X4 201 aa22.42■■□□□ 1.18
SHOX2-201ENST00000389589 SPNP16150 400 aa22.42■■□□□ 1.18
SHOX2-201ENST00000389589 ITGA3P26006 1051 aa22.42■■□□□ 1.18
SHOX2-201ENST00000389589 CARD17Q5XLA6 110 aa22.42■■□□□ 1.18
SHOX2-201ENST00000389589 CREB3L2Q70SY1 520 aa22.42■■□□□ 1.18
SHOX2-201ENST00000389589 OR4M1Q8NGD0 313 aa22.42■■□□□ 1.18
SHOX2-201ENST00000389589 TMEM106AQ96A25 262 aa22.42■■□□□ 1.18
SHOX2-201ENST00000389589 GFI1Q99684 422 aa22.42■■□□□ 1.18
SHOX2-201ENST00000389589 OR2B2Q9GZK3 357 aa22.42■■□□□ 1.18
SHOX2-201ENST00000389589 GTF2A1LQ9UNN4 478 aa22.42■■□□□ 1.18
SHOX2-201ENST00000389589 NPIPA2E9PIF3 369 aa22.41■■□□□ 1.18
SHOX2-201ENST00000389589 NPIPA3F8WFD2 350 aa22.41■■□□□ 1.18
SHOX2-201ENST00000389589 SRSF10O75494 262 aaKnown RBP22.41■■□□□ 1.18
SHOX2-201ENST00000389589 WNT11O96014 354 aa22.41■■□□□ 1.18
SHOX2-201ENST00000389589 RAC3P60763 192 aa22.41■■□□□ 1.18
SHOX2-201ENST00000389589 MADCAM1Q13477 382 aa22.41■■□□□ 1.18
SHOX2-201ENST00000389589 HIST2H2ABQ8IUE6 130 aaPredicted RBP22.41■■□□□ 1.18
SHOX2-201ENST00000389589 RDH10Q8IZV5 341 aa22.41■■□□□ 1.18
SHOX2-201ENST00000389589 ZNF433Q8N7K0 673 aaPredicted RBP22.41■■□□□ 1.18
SHOX2-201ENST00000389589 C19orf18Q8NEA5 215 aa22.41■■□□□ 1.18
SHOX2-201ENST00000389589 IL17RDQ8NFM7 739 aa22.41■■□□□ 1.18
SHOX2-201ENST00000389589 ZNF671Q8TAW3 534 aa22.41■■□□□ 1.18
SHOX2-201ENST00000389589 ADAMTS14Q8WXS8 1223 aa22.41■■□□□ 1.18
SHOX2-201ENST00000389589 FAM173AQ9BQD7 235 aa22.41■■□□□ 1.18
SHOX2-201ENST00000389589 C1orf198Q9H425 327 aa22.41■■□□□ 1.18
SHOX2-201ENST00000389589 TNFSF11O14788 317 aa22.4■■□□□ 1.18
SHOX2-201ENST00000389589 H2BFMP0C1H6 154 aa22.4■■□□□ 1.18
SHOX2-201ENST00000389589 RFPL3SP0C7P2 107 aa22.4■■□□□ 1.18
SHOX2-201ENST00000389589 SNRPBP14678 240 aaKnown RBP22.4■■□□□ 1.18
SHOX2-201ENST00000389589 PITPNBP48739 271 aa22.4■■□□□ 1.18
SHOX2-201ENST00000389589 MFGE8Q08431 387 aaPredicted RBP22.4■■□□□ 1.18
SHOX2-201ENST00000389589 TAB1Q15750 504 aa22.4■■□□□ 1.18
SHOX2-201ENST00000389589 ODF4Q2M2E3 257 aa22.4■■□□□ 1.18
SHOX2-201ENST00000389589 ASB18Q6ZVZ8 466 aa22.4■■□□□ 1.18
SHOX2-201ENST00000389589 OR10AC1Q8NH08 325 aa22.4■■□□□ 1.18
SHOX2-201ENST00000389589 TSEN15Q8WW01 171 aaKnown RBP22.4■■□□□ 1.18
SHOX2-201ENST00000389589 SLC22A13Q9Y226 551 aa22.4■■□□□ 1.18
SHOX2-201ENST00000389589 QDPRP09417 244 aa22.4■■□□□ 1.18
SHOX2-201ENST00000389589 GABREP78334 506 aa22.4■■□□□ 1.18
SHOX2-201ENST00000389589 KCNMB1Q16558 191 aa22.4■■□□□ 1.18
SHOX2-201ENST00000389589 SPINK14Q6IE38 97 aa22.4■■□□□ 1.18
SHOX2-201ENST00000389589 OR9K2Q8NGE7 335 aa22.4■■□□□ 1.18
SHOX2-201ENST00000389589 OR5H6Q8NGV6 325 aa22.4■■□□□ 1.18
SHOX2-201ENST00000389589 SFXN2Q96NB2 322 aa22.4■■□□□ 1.18
SHOX2-201ENST00000389589 SF3B5Q9BWJ5 86 aaKnown RBP22.4■■□□□ 1.18
SHOX2-201ENST00000389589 SLC22A4Q9H015 551 aa22.4■■□□□ 1.18
SHOX2-201ENST00000389589 SEC61A2Q9H9S3 476 aa22.4■■□□□ 1.18
SHOX2-201ENST00000389589 NEURL1O76050 574 aa22.39■■□□□ 1.17
SHOX2-201ENST00000389589 HNRNPCP07910 306 aaKnown RBP eCLIP22.39■■□□□ 1.17
SHOX2-201ENST00000389589 GDF1P27539 372 aa22.39■■□□□ 1.17
SHOX2-201ENST00000389589 DCTDP32321 178 aa22.39■■□□□ 1.17
SHOX2-201ENST00000389589 ESPNLQ6ZVH7 1005 aa22.39■■□□□ 1.17
SHOX2-201ENST00000389589 LRRTM1Q86UE6 522 aa22.39■■□□□ 1.17
SHOX2-201ENST00000389589 CADM3Q8N126 398 aa22.39■■□□□ 1.17
SHOX2-201ENST00000389589 CLEC1AQ8NC01 280 aa22.39■■□□□ 1.17
SHOX2-201ENST00000389589 OR51A4Q8NGJ6 313 aa22.39■■□□□ 1.17
SHOX2-201ENST00000389589 SLAMF6Q96DU3 332 aa22.39■■□□□ 1.17
SHOX2-201ENST00000389589 GLTPQ9NZD2 209 aa22.39■■□□□ 1.17
SHOX2-201ENST00000389589 A0A0G2JMP0 313 aa22.38■■□□□ 1.17
SHOX2-201ENST00000389589 A0A0X1KG70 313 aa22.38■■□□□ 1.17
SHOX2-201ENST00000389589 TRAPPC6AO75865 159 aa22.38■■□□□ 1.17
SHOX2-201ENST00000389589 FOXO1Q12778 655 aa22.38■■□□□ 1.17
SHOX2-201ENST00000389589 PYHIN1Q6K0P9 492 aa22.38■■□□□ 1.17
SHOX2-201ENST00000389589 CORO6Q6QEF8 472 aa22.38■■□□□ 1.17
SHOX2-201ENST00000389589 BAIAP2L2Q6UXY1 529 aa22.38■■□□□ 1.17
SHOX2-201ENST00000389589 NRARPQ7Z6K4 114 aa22.38■■□□□ 1.17
SHOX2-201ENST00000389589 TMPRSS12Q86WS5 348 aa22.38■■□□□ 1.17
SHOX2-201ENST00000389589 OR4M2Q8NGB6 313 aa22.38■■□□□ 1.17
SHOX2-201ENST00000389589 OR2AJ1Q8NGZ0 328 aa22.38■■□□□ 1.17
SHOX2-201ENST00000389589 UCN2Q96RP3 112 aa22.38■■□□□ 1.17
SHOX2-201ENST00000389589 CENPMQ9NSP4 180 aa22.38■■□□□ 1.17
SHOX2-201ENST00000389589 EMC9Q9Y3B6 208 aa22.38■■□□□ 1.17
SHOX2-201ENST00000389589 LINC01387J3KSC0 135 aa22.38■■□□□ 1.17
SHOX2-201ENST00000389589 CDK2AP1O14519 115 aa22.38■■□□□ 1.17
SHOX2-201ENST00000389589 NR4A2P43354 598 aa22.38■■□□□ 1.17
SHOX2-201ENST00000389589 CSNK1A1P48729 337 aa22.38■■□□□ 1.17
SHOX2-201ENST00000389589 UBE2NLQ5JXB2 153 aa22.38■■□□□ 1.17
SHOX2-201ENST00000389589 LRFN4Q6PJG9 635 aa22.38■■□□□ 1.17
SHOX2-201ENST00000389589 RHOUQ7L0Q8 258 aa22.38■■□□□ 1.17
SHOX2-201ENST00000389589 RABL2AQ9UBK7 228 aaPredicted RBP22.38■■□□□ 1.17
SHOX2-201ENST00000389589 RABL2BQ9UNT1 228 aa22.38■■□□□ 1.17
SHOX2-201ENST00000389589 POLR1DQ9Y2S0 133 aa22.38■■□□□ 1.17
SHOX2-201ENST00000389589 PHF3Q92576 2039 aaKnown RBP22.38■■□□□ 1.17
SHOX2-201ENST00000389589 IGHV3-15A0A0B4J1V0 119 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 SLC43A1O75387 559 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 F10P00742 488 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 ISG15P05161 165 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 RFX2P48378 723 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 MMP16P51512 607 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 CARD18P57730 90 aa22.37■■□□□ 1.17
SHOX2-201ENST00000389589 TCF15Q12870 199 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms