RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 TMPRSS12Q86WS5 348 aa11.31□□□□□ -0.6
VPS16-202ENST00000380445 DND1Q8IYX4 353 aaKnown RBP11.31□□□□□ -0.6
VPS16-202ENST00000380445 BMPERQ8N8U9 685 aa11.31□□□□□ -0.6
VPS16-202ENST00000380445 OR2I1PQ8NGU4 316 aa11.31□□□□□ -0.6
VPS16-202ENST00000380445 SYNPRQ8TBG9 265 aa11.31□□□□□ -0.6
VPS16-202ENST00000380445 MR1Q95460 341 aa11.31□□□□□ -0.6
VPS16-202ENST00000380445 HAVCR1Q96D42 359 aa11.31□□□□□ -0.6
VPS16-202ENST00000380445 FOXN4Q96NZ1 517 aa11.31□□□□□ -0.6
VPS16-202ENST00000380445 OR5V1Q9UGF6 321 aa11.31□□□□□ -0.6
VPS16-202ENST00000380445 B3GALT1Q9Y5Z6 326 aa11.31□□□□□ -0.6
VPS16-202ENST00000380445 ALPK2Q86TB3 2170 aa11.31□□□□□ -0.6
VPS16-202ENST00000380445 GABARAPH6UMI1 98 aa11.31□□□□□ -0.6
VPS16-202ENST00000380445 LDOC1O95751 146 aaPredicted RBP11.31□□□□□ -0.6
VPS16-202ENST00000380445 HRGP04196 525 aa11.31□□□□□ -0.6
VPS16-202ENST00000380445 MAS1P04201 325 aa11.31□□□□□ -0.6
VPS16-202ENST00000380445 CD2P06729 351 aa11.31□□□□□ -0.6
VPS16-202ENST00000380445 EIF1P41567 113 aaKnown RBP11.31□□□□□ -0.6
VPS16-202ENST00000380445 MC2RQ01718 297 aa11.31□□□□□ -0.6
VPS16-202ENST00000380445 SNTB2Q13425 540 aaKnown RBP11.31□□□□□ -0.6
VPS16-202ENST00000380445 PCOLCEQ15113 449 aa11.31□□□□□ -0.6
VPS16-202ENST00000380445 HDDC2Q7Z4H3 204 aa11.31□□□□□ -0.6
VPS16-202ENST00000380445 CDH24Q86UP0 819 aa11.31□□□□□ -0.6
VPS16-202ENST00000380445 SIAH3Q8IW03 269 aa11.31□□□□□ -0.6
VPS16-202ENST00000380445 GALNT11Q8NCW6 608 aa11.31□□□□□ -0.6
VPS16-202ENST00000380445 ADPRHL1Q8NDY3 354 aa11.31□□□□□ -0.6
VPS16-202ENST00000380445 SLC26A10Q8NG04 563 aa11.31□□□□□ -0.6
VPS16-202ENST00000380445 SLC25A43Q8WUT9 341 aaPredicted RBP11.31□□□□□ -0.6
VPS16-202ENST00000380445 SLC25A38Q96DW6 304 aa11.31□□□□□ -0.6
VPS16-202ENST00000380445 RBP7Q96R05 134 aa11.31□□□□□ -0.6
VPS16-202ENST00000380445 AKIRIN1Q9H9L7 192 aaPredicted RBP11.31□□□□□ -0.6
VPS16-202ENST00000380445 ZNF275Q9NSD4 429 aaPredicted RBP11.31□□□□□ -0.6
VPS16-202ENST00000380445 KLHL9Q9P2J3 617 aa11.31□□□□□ -0.6
VPS16-202ENST00000380445 STEAP1Q9UHE8 339 aa11.31□□□□□ -0.6
VPS16-202ENST00000380445 GTF2A1LQ9UNN4 478 aa11.31□□□□□ -0.6
VPS16-202ENST00000380445 FAM25EA8MYX2 175 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 PATE3B3GLJ2 98 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 I3L521 148 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 ADRA2CP18825 462 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 CFPP27918 469 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 BTCP35070 178 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 TMEM69Q5SWH9 247 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 OPN5Q6U736 354 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 LIX1LQ8IVB5 337 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 MAML2Q8IZL2 1156 aaPredicted RBP11.3□□□□□ -0.6
VPS16-202ENST00000380445 OR4K17Q8NGC6 315 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 FCAMRQ8WWV6 532 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 RELTQ969Z4 430 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 PLEKHA1Q9HB21 404 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 CKLFQ9UBR5 152 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 PISDQ9UG56 409 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 LRP12Q9Y561 859 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 ADAMTS9Q9P2N4 1935 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 A0A087WV48 116 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 TCRBP04435 133 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 GDNFP39905 211 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 MNDAP41218 407 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 RAG2P55895 527 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 CLDN12P56749 244 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 MYBPHQ13203 477 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 PCK2Q16822 640 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 ODF4Q2M2E3 257 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 OR7E24Q6IFN5 339 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 OR2M3Q8NG83 312 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 TRAF4Q9BUZ4 470 aaPredicted RBP11.3□□□□□ -0.6
VPS16-202ENST00000380445 GTPBP2Q9BX10 602 aaKnown RBP11.3□□□□□ -0.6
VPS16-202ENST00000380445 CACNG6Q9BXT2 260 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 ACTR6Q9GZN1 396 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 ZNF700Q9H0M5 742 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 MCUBQ9NWR8 336 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 CDV3Q9UKY7 258 aaKnown RBP11.3□□□□□ -0.6
VPS16-202ENST00000380445 DHDHQ9UQ10 334 aa11.3□□□□□ -0.6
VPS16-202ENST00000380445 TRAV8-7A0A075B6U6 113 aa11.29□□□□□ -0.6
VPS16-202ENST00000380445 IGHV1-45A0A0A0MS14 117 aa11.29□□□□□ -0.6
VPS16-202ENST00000380445 NAP1L6A6NFF2 107 aa11.29□□□□□ -0.6
VPS16-202ENST00000380445 TTLL8A6PVC2 850 aa11.29□□□□□ -0.6
VPS16-202ENST00000380445 DKK1O94907 266 aa11.29□□□□□ -0.6
VPS16-202ENST00000380445 ZNF28P17035 718 aa11.29□□□□□ -0.6
VPS16-202ENST00000380445 GZMKP49863 264 aa11.29□□□□□ -0.6
VPS16-202ENST00000380445 MAB21L1Q13394 359 aa11.29□□□□□ -0.6
VPS16-202ENST00000380445 TNK1Q13470 666 aa11.29□□□□□ -0.6
VPS16-202ENST00000380445 RNASE12Q5GAN4 147 aaKnown RBP11.29□□□□□ -0.6
VPS16-202ENST00000380445 TMEM81Q6P7N7 255 aa11.29□□□□□ -0.6
VPS16-202ENST00000380445 PRSS45Q7RTY3 260 aa11.29□□□□□ -0.6
VPS16-202ENST00000380445 CATSPERDQ86XM0 798 aa11.29□□□□□ -0.6
VPS16-202ENST00000380445 OR51A4Q8NGJ6 313 aa11.29□□□□□ -0.6
VPS16-202ENST00000380445 OR10AC1Q8NH08 325 aa11.29□□□□□ -0.6
VPS16-202ENST00000380445 M1APQ8TC57 530 aa11.29□□□□□ -0.6
VPS16-202ENST00000380445 ULBP3Q9BZM4 244 aa11.29□□□□□ -0.6
VPS16-202ENST00000380445 RYDENQ9NUL5 291 aaKnown RBP11.29□□□□□ -0.6
VPS16-202ENST00000380445 NUDT15Q9NV35 164 aa11.29□□□□□ -0.6
VPS16-202ENST00000380445 FOXJ3Q9UPW0 622 aa11.29□□□□□ -0.6
VPS16-202ENST00000380445 PTRH2Q9Y3E5 179 aaKnown RBP11.29□□□□□ -0.6
VPS16-202ENST00000380445 R4GMQ9 66 aa11.29□□□□□ -0.6
VPS16-202ENST00000380445 TOR1AO14656 332 aa11.29□□□□□ -0.6
VPS16-202ENST00000380445 KRT33AO76009 404 aa11.29□□□□□ -0.6
VPS16-202ENST00000380445 ZNF250P15622 560 aa11.29□□□□□ -0.6
VPS16-202ENST00000380445 KLF9Q13886 244 aaPredicted RBP11.29□□□□□ -0.6
VPS16-202ENST00000380445 THEM4Q5T1C6 240 aa11.29□□□□□ -0.6
VPS16-202ENST00000380445 GLB1L2Q8IW92 636 aa11.29□□□□□ -0.6
VPS16-202ENST00000380445 UEVLDQ8IX04 471 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms