RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 GCM2O75603 506 aaPredicted RBP8.5□□□□□ -1.05
PTPRA-204ENST00000380393 PGA4P0DJD7 388 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 PGA5P0DJD9 388 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 APOBEC3AP31941 199 aaPredicted RBP8.5□□□□□ -1.05
PTPRA-204ENST00000380393 NSG1P42857 185 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 PGFP49763 221 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 CCL23P55773 120 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 ELOBQ15370 118 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 TRIM61Q5EBN2 209 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 UBE2NLQ5JXB2 153 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 LYPLAL1Q5VWZ2 237 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 TCTN3Q6NUS6 607 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 C17orf64Q86WR6 236 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 KIR2DL5AQ8N109 375 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 EID2Q8N6I1 236 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 OR4K17Q8NGC6 315 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 CSGALNACT1Q8TDX6 532 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 C16orf58Q96GQ5 468 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 PRRX2Q99811 253 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 P2RY12Q9H244 342 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 MTIF3Q9H2K0 278 aaKnown RBP8.5□□□□□ -1.05
PTPRA-204ENST00000380393 MYNNQ9NPC7 610 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 APOBEC3BQ9UH17 382 aaKnown RBP8.5□□□□□ -1.05
PTPRA-204ENST00000380393 NOP16Q9Y3C1 178 aaKnown RBP8.5□□□□□ -1.05
PTPRA-204ENST00000380393 LOC730098B7Z3J9 87 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 YY2O15391 372 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 SLC25A17O43808 307 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 LRP3O75074 770 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 PNLIPP16233 465 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 EFNA3P52797 238 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 PRKAG1P54619 331 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 PRPS1P60891 318 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 MTAPQ13126 283 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 LDLRAD2Q5SZI1 272 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 SLC35D2Q76EJ3 337 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 GRINAQ7Z429 371 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 MRPL41Q8IXM3 137 aaKnown RBP8.5□□□□□ -1.05
PTPRA-204ENST00000380393 METTL27Q8N6F8 245 aaPredicted RBP8.5□□□□□ -1.05
PTPRA-204ENST00000380393 DCUN1D4Q92564 292 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 CMBLQ96DG6 245 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 TECTBQ96PL2 329 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 SIRT4Q9Y6E7 314 aaPredicted RBP8.5□□□□□ -1.05
PTPRA-204ENST00000380393 ARRDC5A6NEK1 342 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 HPRT1P00492 218 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 TDGF1P13385 188 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 TUBG1P23258 451 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 MC4RP32245 332 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 PNPLA4P41247 253 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 RPL34P49207 117 aaKnown RBP8.5□□□□□ -1.05
PTPRA-204ENST00000380393 DCAF7P61962 342 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 NIPAL3Q6P499 406 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 ZNF322Q6U7Q0 402 aaPredicted RBP8.5□□□□□ -1.05
PTPRA-204ENST00000380393 BTNL8Q6UX41 500 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 Q6ZRG5 221 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 CATSPERDQ86XM0 798 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 RNF175Q8N4F7 328 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 ZNF615Q8N8J6 731 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 LMNTD1Q8N9Z9 388 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 PLPP5Q8NEB5 264 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 OR4C16Q8NGL9 310 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 OR9A4Q8NGU2 314 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 SFXN5Q8TD22 340 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 SMIM12Q96EX1 92 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 SLC35E1Q96K37 410 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 ZNF649Q9BS31 505 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 ISG20L2Q9H9L3 353 aaKnown RBP8.5□□□□□ -1.05
PTPRA-204ENST00000380393 POPDC3Q9HBV1 291 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 TUBG2Q9NRH3 451 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 MRPS18AQ9NVS2 196 aaKnown RBP8.5□□□□□ -1.05
PTPRA-204ENST00000380393 OR52A1Q9UKL2 312 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 HS3ST4Q9Y661 456 aa8.5□□□□□ -1.05
PTPRA-204ENST00000380393 IFNW1P05000 195 aa8.49□□□□□ -1.05
PTPRA-204ENST00000380393 UMODP07911 640 aa8.49□□□□□ -1.05
PTPRA-204ENST00000380393 MELTFP08582 738 aa8.49□□□□□ -1.05
PTPRA-204ENST00000380393 OR13C7P0DN81 318 aa8.49□□□□□ -1.05
PTPRA-204ENST00000380393 ACVRL1P37023 503 aa8.49□□□□□ -1.05
PTPRA-204ENST00000380393 P2RX1P51575 399 aa8.49□□□□□ -1.05
PTPRA-204ENST00000380393 CEBPGP53567 150 aa8.49□□□□□ -1.05
PTPRA-204ENST00000380393 MRPS6P82932 125 aaKnown RBP8.49□□□□□ -1.05
PTPRA-204ENST00000380393 TMEM69Q5SWH9 247 aa8.49□□□□□ -1.05
PTPRA-204ENST00000380393 PRSS57Q6UWY2 283 aa8.49□□□□□ -1.05
PTPRA-204ENST00000380393 OR14L1PQ8NHC6 308 aa8.49□□□□□ -1.05
PTPRA-204ENST00000380393 ADAMTS17Q8TE56 1095 aa8.49□□□□□ -1.05
PTPRA-204ENST00000380393 SMPDL3BQ92485 455 aa8.49□□□□□ -1.05
PTPRA-204ENST00000380393 FAM71F1Q96KD3 344 aaPredicted RBP8.49□□□□□ -1.05
PTPRA-204ENST00000380393 TBL1XR1Q9BZK7 514 aa8.49□□□□□ -1.05
PTPRA-204ENST00000380393 PDE7BQ9NP56 450 aa8.49□□□□□ -1.05
PTPRA-204ENST00000380393 SLC2A8Q9NY64 477 aa8.49□□□□□ -1.05
PTPRA-204ENST00000380393 LRFN1Q9P244 771 aa8.49□□□□□ -1.05
PTPRA-204ENST00000380393 SERGEFQ9UGK8 458 aa8.49□□□□□ -1.05
PTPRA-204ENST00000380393 REV3LO60673 3130 aa8.49□□□□□ -1.05
PTPRA-204ENST00000380393 FGF10O15520 208 aaPredicted RBP8.49□□□□□ -1.05
PTPRA-204ENST00000380393 FFAR2O15552 330 aa8.49□□□□□ -1.05
PTPRA-204ENST00000380393 KLK8O60259 260 aa8.49□□□□□ -1.05
PTPRA-204ENST00000380393 TSPAN15O95858 294 aa8.49□□□□□ -1.05
PTPRA-204ENST00000380393 ASGR2P07307 311 aa8.49□□□□□ -1.05
PTPRA-204ENST00000380393 EPCAMP16422 314 aa8.49□□□□□ -1.05
PTPRA-204ENST00000380393 HSD3B2P26439 372 aa8.49□□□□□ -1.05
PTPRA-204ENST00000380393 CD34P28906 385 aa8.49□□□□□ -1.05
PTPRA-204ENST00000380393 GPR4P46093 362 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms