RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 NCKAP5O14513 1909 aa13.67□□□□□ -0.22
RAB3IP-204ENST00000378815 TRBV5-7A0A0A0MS05 114 aa13.67□□□□□ -0.22
RAB3IP-204ENST00000378815 CDK2AP1O14519 115 aa13.67□□□□□ -0.22
RAB3IP-204ENST00000378815 TM4SF5O14894 197 aa13.67□□□□□ -0.22
RAB3IP-204ENST00000378815 NR2C1P13056 603 aa13.67□□□□□ -0.22
RAB3IP-204ENST00000378815 ATF1P18846 271 aa13.67□□□□□ -0.22
RAB3IP-204ENST00000378815 ELK1P19419 428 aa13.67□□□□□ -0.22
RAB3IP-204ENST00000378815 AZGP1P25311 298 aaKnown RBP13.67□□□□□ -0.22
RAB3IP-204ENST00000378815 APEX1P27695 318 aaKnown RBP13.67□□□□□ -0.22
RAB3IP-204ENST00000378815 SUCLG1P53597 346 aaKnown RBP13.67□□□□□ -0.22
RAB3IP-204ENST00000378815 CARD18P57730 90 aa13.67□□□□□ -0.22
RAB3IP-204ENST00000378815 BAK1Q16611 211 aa13.67□□□□□ -0.22
RAB3IP-204ENST00000378815 CORO6Q6QEF8 472 aa13.67□□□□□ -0.22
RAB3IP-204ENST00000378815 TMEM123Q8N131 208 aa13.67□□□□□ -0.22
RAB3IP-204ENST00000378815 OR8H2Q8N162 312 aa13.67□□□□□ -0.22
RAB3IP-204ENST00000378815 ZIC4Q8N9L1 334 aa13.67□□□□□ -0.22
RAB3IP-204ENST00000378815 POC5Q8NA72 575 aa13.67□□□□□ -0.22
RAB3IP-204ENST00000378815 OR10AC1Q8NH08 325 aa13.67□□□□□ -0.22
RAB3IP-204ENST00000378815 TMEM54Q969K7 222 aa13.67□□□□□ -0.22
RAB3IP-204ENST00000378815 GFI1Q99684 422 aa13.67□□□□□ -0.22
RAB3IP-204ENST00000378815 TIGARQ9NQ88 270 aa13.67□□□□□ -0.22
RAB3IP-204ENST00000378815 GLTPQ9NZD2 209 aa13.67□□□□□ -0.22
RAB3IP-204ENST00000378815 AK6Q9Y3D8 172 aaKnown RBP13.67□□□□□ -0.22
RAB3IP-204ENST00000378815 R4GMQ9 66 aa13.67□□□□□ -0.22
RAB3IP-204ENST00000378815 ARPC4-TTLL3A0A0A6YYG9 625 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 ANKRD61A6NGH8 418 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 LINC01387J3KSC0 135 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 RAF1P04049 648 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 LIPCP11150 499 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 CEACAM1P13688 526 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 PTBP1P26599 531 aaKnown RBP eCLIP13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 STARP49675 285 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 PSMD7P51665 324 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 CLDN15P56746 228 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 SOX8P57073 446 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 KCNMB1Q16558 191 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 ZNF544Q6NX49 715 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 LRRC28Q86X40 367 aaPredicted RBP13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 MDS2Q8NDY4 140 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 OR51A4Q8NGJ6 313 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 SP140LQ9H930 580 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 SEC61A2Q9H9S3 476 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 B4GALT7Q9UBV7 327 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 FBXL3Q9UKT7 428 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 SLC22A13Q9Y226 551 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 ARGFXA6NJG6 315 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 PDCD5O14737 125 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 HPNP05981 417 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 IL7P13232 177 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 POU3F2P20265 443 aaPredicted RBP13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 CDAP32320 146 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 SOX2P48431 317 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 ZNF133P52736 654 aaPredicted RBP13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 ODF4Q2M2E3 257 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 OR2V1Q8NHB1 315 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 TRMT10AQ8TBZ6 339 aaKnown RBP13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 IRF2BPLQ9H1B7 796 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 SLC25A18Q9H1K4 315 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 EMC7Q9NPA0 242 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 CYSLTR2Q9NS75 346 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 LHFPL6Q9Y693 200 aa13.66□□□□□ -0.22
RAB3IP-204ENST00000378815 PAHP00439 452 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 CSNK1A1P48729 337 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 RRADP55042 308 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 DEFA1P59665 94 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 DEFA3P59666 94 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 RIN1Q13671 783 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 STAC2Q6ZMT1 411 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 VASH2Q86V25 355 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 UBQLNLQ8IYU4 475 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 SAMD12Q8N8I0 201 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 OR10S1Q8NGN2 331 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 OR10D3Q8NH80 312 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 ABTB1Q969K4 478 aaPredicted RBP13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 SLAMF6Q96DU3 332 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 TTTY12Q9BZ98 90 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 C1orf198Q9H425 327 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 ABRACLQ9P1F3 81 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 OR5H15A6NDH6 313 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 CXCL13O43927 109 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 NME2P1O60361 137 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 PTTG1O95997 202 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 NPR2P20594 1047 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 NME2P22392 152 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 RFC3P40938 356 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 CDC20Q12834 499 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 PYDC2Q56P42 97 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 C10orf128Q5T292 105 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 AGAP7PQ5VUJ5 663 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 TMPRSS7Q7RTY8 843 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 THRSPQ92748 146 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 PPP1R14AQ96A00 147 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 TMEM106AQ96A25 262 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 AGAP4Q96P64 663 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 G6PC2Q9NQR9 355 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 GDF2Q9UK05 429 aaPredicted RBP13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 TBC1D24Q9ULP9 559 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 GTF2A1LQ9UNN4 478 aa13.65□□□□□ -0.22
RAB3IP-204ENST00000378815 EMC9Q9Y3B6 208 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms