RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 OR6S1Q8NH40 331 aa16.33■□□□□ 0.21
TDP2-202ENST00000378198 CCDC107Q8WV48 283 aa16.33■□□□□ 0.21
TDP2-202ENST00000378198 SLC25A44Q96H78 314 aaPredicted RBP16.33■□□□□ 0.21
TDP2-202ENST00000378198 SLC41A2Q96JW4 573 aa16.33■□□□□ 0.21
TDP2-202ENST00000378198 RDH8Q9NYR8 311 aa16.33■□□□□ 0.21
TDP2-202ENST00000378198 TAS2R4Q9NYW5 299 aa16.33■□□□□ 0.21
TDP2-202ENST00000378198 HHLA2Q9UM44 414 aa16.33■□□□□ 0.21
TDP2-202ENST00000378198 COA3Q9Y2R0 106 aaPredicted RBP16.33■□□□□ 0.21
TDP2-202ENST00000378198 A6NIZ1 184 aa16.33■□□□□ 0.2
TDP2-202ENST00000378198 ARPC5O15511 151 aa16.33■□□□□ 0.2
TDP2-202ENST00000378198 SRSF10O75494 262 aaKnown RBP16.33■□□□□ 0.2
TDP2-202ENST00000378198 RP2O75695 350 aa16.33■□□□□ 0.2
TDP2-202ENST00000378198 SIX6O95475 246 aa16.33■□□□□ 0.2
TDP2-202ENST00000378198 ITGB2P05107 769 aa16.33■□□□□ 0.2
TDP2-202ENST00000378198 GABRA1P14867 456 aa16.33■□□□□ 0.2
TDP2-202ENST00000378198 GMFBP60983 142 aa16.33■□□□□ 0.2
TDP2-202ENST00000378198 RAP1BP61224 184 aa16.33■□□□□ 0.2
TDP2-202ENST00000378198 RAP1AP62834 184 aa16.33■□□□□ 0.2
TDP2-202ENST00000378198 OR8S1Q8NH09 359 aa16.33■□□□□ 0.2
TDP2-202ENST00000378198 DUSP19Q8WTR2 217 aa16.33■□□□□ 0.2
TDP2-202ENST00000378198 TNFAIP8L1Q8WVP5 186 aa16.33■□□□□ 0.2
TDP2-202ENST00000378198 SEH1LQ96EE3 360 aa16.33■□□□□ 0.2
TDP2-202ENST00000378198 CCDC120Q96HB5 630 aa16.33■□□□□ 0.2
TDP2-202ENST00000378198 POTEKPQ9BYX7 375 aa16.33■□□□□ 0.2
TDP2-202ENST00000378198 SLCO5A1Q9H2Y9 848 aa16.33■□□□□ 0.2
TDP2-202ENST00000378198 C1orf198Q9H425 327 aa16.33■□□□□ 0.2
TDP2-202ENST00000378198 TMEM138Q9NPI0 162 aa16.33■□□□□ 0.2
TDP2-202ENST00000378198 MED9Q9NWA0 146 aa16.33■□□□□ 0.2
TDP2-202ENST00000378198 UNC80Q8N2C7 3258 aa16.32■□□□□ 0.2
TDP2-202ENST00000378198 A0A0A6YYH2 397 aa16.32■□□□□ 0.2
TDP2-202ENST00000378198 hCG_1807616A0A1W2PRN6 198 aa16.32■□□□□ 0.2
TDP2-202ENST00000378198 A6NJ64 397 aa16.32■□□□□ 0.2
TDP2-202ENST00000378198 B3GALNT1O75752 331 aa16.32■□□□□ 0.2
TDP2-202ENST00000378198 PPP3CBP16298 524 aa16.32■□□□□ 0.2
TDP2-202ENST00000378198 DNASE1L1P49184 302 aa16.32■□□□□ 0.2
TDP2-202ENST00000378198 MFSD13AQ14CX5 517 aa16.32■□□□□ 0.2
TDP2-202ENST00000378198 GLYATL3Q5SZD4 288 aa16.32■□□□□ 0.2
TDP2-202ENST00000378198 DNM1P34Q6PK57 102 aa16.32■□□□□ 0.2
TDP2-202ENST00000378198 TSSK4Q6SA08 328 aa16.32■□□□□ 0.2
TDP2-202ENST00000378198 MDGA2Q7Z553 956 aa16.32■□□□□ 0.2
TDP2-202ENST00000378198 MISPQ8IVT2 679 aa16.32■□□□□ 0.2
TDP2-202ENST00000378198 NAXDQ8IW45 347 aa16.32■□□□□ 0.2
TDP2-202ENST00000378198 PRSS58Q8IYP2 241 aa16.32■□□□□ 0.2
TDP2-202ENST00000378198 D2HGDHQ8N465 521 aa16.32■□□□□ 0.2
TDP2-202ENST00000378198 TMEM234Q8WY98 164 aa16.32■□□□□ 0.2
TDP2-202ENST00000378198 DVL3Q92997 716 aaPredicted RBP16.32■□□□□ 0.2
TDP2-202ENST00000378198 OR11A1Q9GZK7 315 aa16.32■□□□□ 0.2
TDP2-202ENST00000378198 CHRDQ9H2X0 955 aa16.32■□□□□ 0.2
TDP2-202ENST00000378198 MED11Q9P086 117 aa16.32■□□□□ 0.2
TDP2-202ENST00000378198 MKL2Q9ULH7 1088 aa16.32■□□□□ 0.2
TDP2-202ENST00000378198 KNL1Q8NG31 2342 aa16.32■□□□□ 0.2
TDP2-202ENST00000378198 EXPH5Q8NEV8 1989 aa16.32■□□□□ 0.2
TDP2-202ENST00000378198 FTCDNL1E5RQL4 147 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 RAB3DO95716 219 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 PMS2P2O95744 297 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 ISG15P05161 165 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 ZNF823P16415 610 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 ACHEP22303 614 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 OR1D5P58170 312 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 ZP4Q12836 540 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 C4orf46Q504U0 113 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 TMEM205Q6UW68 189 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 ZNF627Q7L945 461 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 GPAT4Q86UL3 456 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 PLXDC1Q8IUK5 500 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 OR13C3Q8NGS6 347 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 DPYSL5Q9BPU6 564 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 SLC25A21Q9BQT8 299 aaPredicted RBP16.31■□□□□ 0.2
TDP2-202ENST00000378198 VN1R1Q9GZP7 353 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 FREM3P0C091 2139 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 RP1P56715 2156 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 IGHV1OR21-1A0A087WYE8 117 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 SOX1O00570 391 aaPredicted RBP16.31■□□□□ 0.2
TDP2-202ENST00000378198 CALCRP30988 508 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 PTGS2P35354 604 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 ARRB1P49407 418 aaPredicted RBP16.31■□□□□ 0.2
TDP2-202ENST00000378198 OC90Q02509 493 aaPredicted RBP16.31■□□□□ 0.2
TDP2-202ENST00000378198 TDGQ13569 410 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 ADGRE4PQ86SQ3 457 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 PLPP5Q8NEB5 264 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 SCARB1Q8WTV0 552 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 ZNF107Q9UII5 783 aaPredicted RBP16.31■□□□□ 0.2
TDP2-202ENST00000378198 EMC9Q9Y3B6 208 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 SPEF1Q9Y4P9 236 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 MRPS18BQ9Y676 258 aaKnown RBP16.31■□□□□ 0.2
TDP2-202ENST00000378198 CACNA1CQ13936 2221 aa16.31■□□□□ 0.2
TDP2-202ENST00000378198 CEP192Q8TEP8 1941 aa16.3■□□□□ 0.2
TDP2-202ENST00000378198 FXYD6-FXYD2A0A087WZ82 144 aa16.3■□□□□ 0.2
TDP2-202ENST00000378198 A0A1B0GX78 115 aa16.3■□□□□ 0.2
TDP2-202ENST00000378198 H3BUI4 141 aa16.3■□□□□ 0.2
TDP2-202ENST00000378198 LDLRAD4O15165 306 aa16.3■□□□□ 0.2
TDP2-202ENST00000378198 SDC3O75056 442 aa16.3■□□□□ 0.2
TDP2-202ENST00000378198 MPZL1O95297 269 aa16.3■□□□□ 0.2
TDP2-202ENST00000378198 UBE2MP61081 183 aaKnown RBP16.3■□□□□ 0.2
TDP2-202ENST00000378198 WDR45BQ5MNZ6 344 aa16.3■□□□□ 0.2
TDP2-202ENST00000378198 TMEM65Q6PI78 240 aa16.3■□□□□ 0.2
TDP2-202ENST00000378198 C11orf88Q6PI97 169 aa16.3■□□□□ 0.2
TDP2-202ENST00000378198 ZNF704Q6ZNC4 412 aaPredicted RBP16.3■□□□□ 0.2
TDP2-202ENST00000378198 SLC26A10Q8NG04 563 aa16.3■□□□□ 0.2
TDP2-202ENST00000378198 PTX4Q96A99 478 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms