RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 PABPC1L2AQ5JQF8 200 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 SLX4IPQ5VYV7 408 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 UGT2A3Q6UWM9 527 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 CDH24Q86UP0 819 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 MYPOPQ86VE0 399 aaPredicted RBP11.48□□□□□ -0.57
CKAP2-202ENST00000378034 ZNF584Q8IVC4 421 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 OR10H5Q8NGA6 315 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 FOXN4Q96NZ1 517 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 FAIMQ9NVQ4 179 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 SPEF1Q9Y4P9 236 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 ATP23Q9Y6H3 246 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 PRR23D1E9PI22 279 aaPredicted RBP11.48□□□□□ -0.57
CKAP2-202ENST00000378034 EI24O14681 340 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 MPZL1O95297 269 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 PRR23D2P0DMB1 279 aaPredicted RBP11.48□□□□□ -0.57
CKAP2-202ENST00000378034 COX5BP10606 129 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 CALCRP30988 508 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 SNAPC1Q16533 368 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 TBC1D28Q2M2D7 210 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 TMEM236Q5W0B7 351 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 ZNF544Q6NX49 715 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 CBR4Q8N4T8 237 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 SLC30A7Q8NEW0 376 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 NUP37Q8NFH4 326 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 EME1Q96AY2 570 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 MS4A3Q96HJ5 214 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 DHRS9Q9BPW9 319 aa11.48□□□□□ -0.57
CKAP2-202ENST00000378034 E7EQL1 145 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 SNAP29O95721 258 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 HLA-DQA2P01906 255 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 TFP02787 698 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 ANPEPP15144 967 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 ZNF823P16415 610 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 DNASE1P24855 282 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 FMO3P31513 532 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 PYCR1P32322 319 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 APLNRP35414 380 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 C12orf73Q69YU5 71 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 ZBTB49Q6ZSB9 765 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 GJC3Q8NFK1 279 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 OR9Q1Q8NGQ5 310 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 NEUROG1Q92886 237 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 PTP4A1Q93096 173 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 PIGTQ969N2 578 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 WNT5BQ9H1J7 359 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 C8orf4Q9NR00 106 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 TVP23BQ9NYZ1 205 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 ASH2LQ9UBL3 628 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 ATPIF1Q9UII2 106 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 POLR1DQ9Y2S0 133 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 CADP27708 2225 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 TACC2O95359 2948 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 FAM171A2A8MVW0 826 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 VSTM5A8MXK1 200 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 PRODHO43272 600 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 ATE1O95260 518 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 NR4A1P22736 598 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 STOMP27105 288 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 HIST1H3AP68431 136 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 ELF3P78545 371 aaPredicted RBP11.47□□□□□ -0.57
CKAP2-202ENST00000378034 GALK2Q01415 458 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 KEAP1Q14145 624 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 RCN1Q15293 331 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 SLC35D3Q5M8T2 416 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 HIST2H3PS2Q5TEC6 136 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 HIST2H3AQ71DI3 136 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 CPEB3Q8NE35 698 aaKnown RBP11.47□□□□□ -0.57
CKAP2-202ENST00000378034 SMAP2Q8WU79 429 aaPredicted RBP11.47□□□□□ -0.57
CKAP2-202ENST00000378034 NRGNQ92686 78 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 CDADC1Q9BWV3 514 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 GRIP2Q9C0E4 1043 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 LIME1Q9H400 295 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 RIBC2Q9H4K1 309 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 DCLRE1BQ9H816 532 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 CDH20Q9HBT6 801 aa11.47□□□□□ -0.57
CKAP2-202ENST00000378034 NDRG4Q9ULP0 352 aaKnown RBP11.47□□□□□ -0.57
CKAP2-202ENST00000378034 FAM183AA6NL82 134 aa11.46□□□□□ -0.58
CKAP2-202ENST00000378034 CYSRT1A8MQ03 144 aa11.46□□□□□ -0.58
CKAP2-202ENST00000378034 SGCEO43556 437 aa11.46□□□□□ -0.58
CKAP2-202ENST00000378034 GLCEO94923 617 aa11.46□□□□□ -0.58
CKAP2-202ENST00000378034 GPANK1O95872 356 aa11.46□□□□□ -0.58
CKAP2-202ENST00000378034 APEX1P27695 318 aaKnown RBP11.46□□□□□ -0.58
CKAP2-202ENST00000378034 PCSK6P29122 969 aa11.46□□□□□ -0.58
CKAP2-202ENST00000378034 APOBEC3AP31941 199 aaPredicted RBP11.46□□□□□ -0.58
CKAP2-202ENST00000378034 GDI2P50395 445 aaKnown RBP11.46□□□□□ -0.58
CKAP2-202ENST00000378034 HGFACQ04756 655 aa11.46□□□□□ -0.58
CKAP2-202ENST00000378034 MEP1BQ16820 701 aa11.46□□□□□ -0.58
CKAP2-202ENST00000378034 TEX30Q5JUR7 227 aa11.46□□□□□ -0.58
CKAP2-202ENST00000378034 PLBD1Q6P4A8 553 aa11.46□□□□□ -0.58
CKAP2-202ENST00000378034 B3GLCTQ6Y288 498 aa11.46□□□□□ -0.58
CKAP2-202ENST00000378034 CPOQ8IVL8 374 aa11.46□□□□□ -0.58
CKAP2-202ENST00000378034 OR2AJ1Q8NGZ0 328 aa11.46□□□□□ -0.58
CKAP2-202ENST00000378034 AKR7LQ8NHP1 331 aa11.46□□□□□ -0.58
CKAP2-202ENST00000378034 OTULINQ96BN8 352 aa11.46□□□□□ -0.58
CKAP2-202ENST00000378034 MBD6Q96DN6 1003 aa11.46□□□□□ -0.58
CKAP2-202ENST00000378034 POM121L2Q96KW2 1035 aa11.46□□□□□ -0.58
CKAP2-202ENST00000378034 ZNF442Q9H7R0 627 aa11.46□□□□□ -0.58
CKAP2-202ENST00000378034 MRPL22Q9NWU5 206 aaKnown RBP11.46□□□□□ -0.58
CKAP2-202ENST00000378034 CYB5R1Q9UHQ9 305 aa11.46□□□□□ -0.58
CKAP2-202ENST00000378034 LHFPL6Q9Y693 200 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms