RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 TMUB2Q71RG4 321 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 SPNS2Q8IVW8 549 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 SLC22A24Q8N4F4 322 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 RASD2Q96D21 266 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 KIR3DX1Q9H7L2 352 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 LANCL2Q9NS86 450 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 LGI1O95970 557 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 SLC35A1P78382 337 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 SLC46A3Q7Z3Q1 461 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 RHOXF1Q8NHV9 184 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 GLIPR2Q9H4G4 154 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 CGGBP1Q9UFW8 167 aaPredicted RBP13.12□□□□□ -0.31
TRAF1-201ENST00000373887 IGLV3-10A0A075B6K4 115 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 ZNF814B7Z6K7 855 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 ZNF587BE7ETH6 402 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 GABREP78334 506 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 SRPXP78539 464 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 PLK5Q496M5 336 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 GLIPR1L1Q6UWM5 242 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 PDLIM5Q96HC4 596 aaKnown RBP13.12□□□□□ -0.31
TRAF1-201ENST00000373887 FBXO8Q9NRD0 319 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 ADAM23O75077 832 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 OR2C1O95371 312 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 CTSLP07711 333 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 GCAP28676 217 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 ADAM5Q6NVV9 412 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 Q6ZRG5 221 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 FAM71CQ8NEG0 241 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 C11orf54Q9H0W9 315 aaPredicted RBP13.12□□□□□ -0.31
TRAF1-201ENST00000373887 CXorf36Q9H7Y0 433 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 URB1O60287 2271 aaKnown RBP13.12□□□□□ -0.31
TRAF1-201ENST00000373887 ECM29Q5VYK3 1845 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 LGALS8O00214 317 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 ALKBH1Q13686 389 aaKnown RBP13.12□□□□□ -0.31
TRAF1-201ENST00000373887 Q499Y3 187 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 C11orf42Q8N5U0 333 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 NIT2Q9NQR4 276 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 MYH7BA7E2Y1 1941 aa13.12□□□□□ -0.31
TRAF1-201ENST00000373887 OR6C68A6NDL8 312 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 ZNF724A8MTY0 619 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 CLEC2LP0C7M8 214 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 NPPBP16860 134 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 GIPRP48546 466 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 METRNLQ641Q3 311 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 ZNF813Q6ZN06 617 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 MBOAT2Q6ZWT7 520 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 SLC38A5Q8WUX1 472 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 NUDT8Q8WV74 236 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 TRIB1Q96RU8 372 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 DCAF16Q9NXF7 216 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 RNF150Q9ULK6 438 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 IL9P15248 144 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 S100A11P31949 105 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 RAB13P51153 203 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 GFERP55789 205 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 KDM4DQ6B0I6 523 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 GATA6Q92908 595 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 MARC2Q969Z3 335 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 CDK5RAP2Q96SN8 1893 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 CSN1S1P47710 185 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 CCL7P80098 99 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 C17orf67Q0P5P2 114 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 SNTB1Q13884 538 aaKnown RBP13.11□□□□□ -0.31
TRAF1-201ENST00000373887 TBC1D28Q2M2D7 210 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 HLA-BQ31612 363 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 OR10G3Q8NGC4 313 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 OR52I1Q8NGK6 324 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 PINX1Q96BK5 328 aaKnown RBP13.11□□□□□ -0.31
TRAF1-201ENST00000373887 B4GALT3O60512 393 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 MT-ND4LP03901 98 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 TMEM123Q8N131 208 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 DEFB124Q8NES8 71 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 SLC24A4Q8NFF2 622 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 OR1M1Q8NGA1 313 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 OR10Z1Q8NGY1 313 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 FAM3DQ96BQ1 224 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 TMEM221A6NGB7 291 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 ARNTLO00327 626 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 OR2T7P0C7T2 308 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 DCXRQ7Z4W1 244 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 GMPR2Q9P2T1 348 aaKnown RBP13.11□□□□□ -0.31
TRAF1-201ENST00000373887 MOKQ9UQ07 419 aa13.11□□□□□ -0.31
TRAF1-201ENST00000373887 LOC100289279A0A1B0GTE1 492 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 PRAMEF25A6NGN4 478 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 C4orf47A7E2U8 309 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 PAPLNO95428 1278 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 FURINP09958 794 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 ZNF90Q03938 601 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 NAXDQ8IW45 347 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 OR10J5Q8NHC4 309 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 TMEM231Q9H6L2 316 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 GPR173Q9NS66 373 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 AK3Q9UIJ7 227 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 TJP1Q07157 1748 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 TRAV36DV7A0A075B6V5 113 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 TRGV8A0A0C4DH27 118 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 SLCO2B1O94956 709 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 SCG5P05408 212 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 CLEC12BQ2HXU8 276 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 BTNL8Q6UX41 500 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms