RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 NKAIN4Q8IVV8 208 aa9.68□□□□□ -0.86
PGK1-201ENST00000373316 OR1M1Q8NGA1 313 aa9.68□□□□□ -0.86
PGK1-201ENST00000373316 OR52H1Q8NGJ2 320 aa9.68□□□□□ -0.86
PGK1-201ENST00000373316 SENP5Q96HI0 755 aaPredicted RBP9.68□□□□□ -0.86
PGK1-201ENST00000373316 MED16Q9Y2X0 877 aa9.68□□□□□ -0.86
PGK1-201ENST00000373316 XRCC3O43542 346 aa9.68□□□□□ -0.86
PGK1-201ENST00000373316 XRCC2O43543 280 aa9.68□□□□□ -0.86
PGK1-201ENST00000373316 CTSLP07711 333 aa9.68□□□□□ -0.86
PGK1-201ENST00000373316 MSR1P21757 451 aa9.68□□□□□ -0.86
PGK1-201ENST00000373316 PCMT1P22061 227 aa9.68□□□□□ -0.86
PGK1-201ENST00000373316 RAE1P78406 368 aaKnown RBP9.68□□□□□ -0.86
PGK1-201ENST00000373316 ZIC1Q15915 447 aa9.68□□□□□ -0.86
PGK1-201ENST00000373316 ELP2Q6IA86 826 aa9.68□□□□□ -0.86
PGK1-201ENST00000373316 PLXDC2Q6UX71 529 aa9.68□□□□□ -0.86
PGK1-201ENST00000373316 GLYATL2Q8WU03 294 aa9.68□□□□□ -0.86
PGK1-201ENST00000373316 GNPNAT1Q96EK6 184 aaPredicted RBP9.68□□□□□ -0.86
PGK1-201ENST00000373316 ST6GALNAC5Q9BVH7 336 aa9.68□□□□□ -0.86
PGK1-201ENST00000373316 IKZF5Q9H5V7 419 aa9.68□□□□□ -0.86
PGK1-201ENST00000373316 UCK1Q9HA47 277 aa9.68□□□□□ -0.86
PGK1-201ENST00000373316 SMCO4Q9NRQ5 59 aa9.68□□□□□ -0.86
PGK1-201ENST00000373316 KCMF1Q9P0J7 381 aa9.68□□□□□ -0.86
PGK1-201ENST00000373316 ASB1Q9Y576 335 aa9.68□□□□□ -0.86
PGK1-201ENST00000373316 UPK1AO00322 258 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 MRPL33O75394 65 aaKnown RBP9.67□□□□□ -0.86
PGK1-201ENST00000373316 MGMTP16455 207 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 HOXC5Q00444 222 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 SPOCK1Q08629 439 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 DEFB133Q30KQ1 61 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 ANKRD16Q6P6B7 361 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 AAED1Q7RTV5 226 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 SLC16A14Q7RTX9 510 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 PSMF1Q92530 271 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 VOPP1Q96AW1 172 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 OXGR1Q96P68 337 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 GAREM1Q9H706 876 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 ACOXLQ9NUZ1 547 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 PCDHB10Q9UN67 800 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 MTFR2Q6P444 385 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 PARM1Q6UWI2 310 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 TMEM179BQ7Z7N9 219 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 TMEM200AQ86VY9 491 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 MSRB3Q8IXL7 192 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 MAML2Q8IZL2 1156 aaPredicted RBP9.67□□□□□ -0.86
PGK1-201ENST00000373316 CLEC1AQ8NC01 280 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 OR6S1Q8NH40 331 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 COX14Q96I36 57 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 UQCC2Q9BRT2 126 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 COL4A3Q01955 1670 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 ASPMQ8IZT6 3477 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 C2orf16Q68DN1 1984 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 ANKUB1A6NFN9 424 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 GYPBP06028 91 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 NFYBP25208 207 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 CAV2P51636 162 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 ARRDC1Q8N5I2 433 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 DUSP19Q8WTR2 217 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 NRTNQ99748 197 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 CA14Q9ULX7 337 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 F5H5K5 113 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 PIP5K1CO60331 668 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 STK17BO94768 372 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 KNG1P01042 644 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 CEACAM5P06731 702 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 FLI1Q01543 452 aaPredicted RBP9.67□□□□□ -0.86
PGK1-201ENST00000373316 TRA2AQ13595 282 aaKnown RBP eCLIP9.67□□□□□ -0.863e-9■■■■■ 33.7
PGK1-201ENST00000373316 SLC17A1Q14916 467 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 POU4F3Q15319 338 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 PLA1AQ53H76 456 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 EXOSC6Q5RKV6 272 aaKnown RBP9.67□□□□□ -0.86
PGK1-201ENST00000373316 BEND4Q6ZU67 534 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 FAM57BQ71RH2 274 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 UBL7Q96S82 380 aaPredicted RBP9.67□□□□□ -0.86
PGK1-201ENST00000373316 MYO10Q9HD67 2058 aa9.67□□□□□ -0.86
PGK1-201ENST00000373316 A0A087WUJ7 227 aa9.66□□□□□ -0.86
PGK1-201ENST00000373316 PRSS44E7EML9 344 aa9.66□□□□□ -0.86
PGK1-201ENST00000373316 PTPN6P29350 595 aa9.66□□□□□ -0.86
PGK1-201ENST00000373316 EVI2BP34910 448 aa9.66□□□□□ -0.86
PGK1-201ENST00000373316 TPMTP51580 245 aa9.66□□□□□ -0.86
PGK1-201ENST00000373316 AGERQ15109 404 aa9.66□□□□□ -0.86
PGK1-201ENST00000373316 FAHD2BQ6P2I3 314 aaPredicted RBP9.66□□□□□ -0.86
PGK1-201ENST00000373316 MOB3CQ70IA8 216 aa9.66□□□□□ -0.86
PGK1-201ENST00000373316 DPY19L4Q7Z388 723 aa9.66□□□□□ -0.86
PGK1-201ENST00000373316 DUSP18Q8NEJ0 188 aa9.66□□□□□ -0.86
PGK1-201ENST00000373316 OR10K1Q8NGX5 313 aa9.66□□□□□ -0.86
PGK1-201ENST00000373316 GCDHQ92947 438 aaPredicted RBP9.66□□□□□ -0.86
PGK1-201ENST00000373316 FAHD2AQ96GK7 314 aa9.66□□□□□ -0.86
PGK1-201ENST00000373316 FGF22Q9HCT0 170 aa9.66□□□□□ -0.86
PGK1-201ENST00000373316 A0A0B4J2E0 115 aa9.66□□□□□ -0.86
PGK1-201ENST00000373316 A0A1B0GX12 115 aa9.66□□□□□ -0.86
PGK1-201ENST00000373316 PRSS37A4D1T9 235 aa9.66□□□□□ -0.86
PGK1-201ENST00000373316 PCP4L1A6NKN8 68 aa9.66□□□□□ -0.86
PGK1-201ENST00000373316 TOX3O15405 576 aaPredicted RBP9.66□□□□□ -0.86
PGK1-201ENST00000373316 NCR1O76036 304 aa9.66□□□□□ -0.86
PGK1-201ENST00000373316 PVRP15151 417 aa9.66□□□□□ -0.86
PGK1-201ENST00000373316 PTNP21246 168 aa9.66□□□□□ -0.86
PGK1-201ENST00000373316 THBS4P35443 961 aa9.66□□□□□ -0.86
PGK1-201ENST00000373316 ZNF141Q15928 474 aa9.66□□□□□ -0.86
PGK1-201ENST00000373316 CLLU1Q5K131 121 aa9.66□□□□□ -0.86
PGK1-201ENST00000373316 LIPNQ5VXI9 398 aa9.66□□□□□ -0.86
PGK1-201ENST00000373316 GRAMD2AQ8IUY3 354 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms