RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 VSIG4Q9Y279 399 aa14.76□□□□□ -0.05
SDC4-201ENST00000372733 DCDC2BA2VCK2 349 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 SCDO00767 359 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 PHYHO14832 338 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 ZNF264O43296 627 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 GP1BAP07359 652 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 GLULP15104 373 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 PPIAP62937 165 aaKnown RBP14.75□□□□□ -0.05
SDC4-201ENST00000372733 CLVS2Q5SYC1 327 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 FDX2Q6P4F2 183 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 TAF8Q7Z7C8 310 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 PRR22Q8IZ63 422 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 PPP1R1CQ8WVI7 109 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 EDAQ92838 391 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 CMKLR1Q99788 373 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 RTN4RQ9BZR6 473 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 MRPL22Q9NWU5 206 aaKnown RBP14.75□□□□□ -0.05
SDC4-201ENST00000372733 HPF1Q9NWY4 346 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 B9D1Q9UPM9 204 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 A0A1W2PPC1 479 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 FITM1A5D6W6 292 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 MPTX1A8MV57 137 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 XKRYO14609 159 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 UTS2O95399 124 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 CAPZA1P52907 286 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 SPOCK1Q08629 439 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 FGL1Q08830 312 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 PMPCAQ10713 525 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 ZNF679Q8IYX0 411 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 RNF128Q8TEB7 428 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 ASB5Q8WWX0 329 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 GABRG3Q99928 467 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 COMMD9Q9P000 198 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 PLEKHA6Q9Y2H5 1048 aa14.75□□□□□ -0.05
SDC4-201ENST00000372733 HSPB2A8KAH6 182 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 FAM25EA8MYX2 175 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 SULT1C2O00338 296 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 TNFRSF10CO14798 259 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 OR2F2O95006 317 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 OR2F1Q13607 317 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 ZNF345Q14585 488 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 TOMM34Q15785 309 aaPredicted RBP14.74□□□□□ -0.05
SDC4-201ENST00000372733 HSPB2Q16082 182 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 CORO6Q6QEF8 472 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 ADGRE4PQ86SQ3 457 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 CD163Q86VB7 1156 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 LINC00518Q8N0U6 118 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 JAGN1Q8N5M9 183 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 FAM160A2Q8N612 972 aaPredicted RBP14.74□□□□□ -0.05
SDC4-201ENST00000372733 C19orf47Q8N9M1 422 aaKnown RBP14.74□□□□□ -0.05
SDC4-201ENST00000372733 ACBD4Q8NC06 268 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 ASB12Q8WXK4 309 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 HERVK_113Q902F9 699 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 THRSPQ92748 146 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 NKD1Q969G9 470 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 SLC25A44Q96H78 314 aaPredicted RBP14.74□□□□□ -0.05
SDC4-201ENST00000372733 SEMA6CQ9H3T2 930 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 PRMT8Q9NR22 394 aaPredicted RBP14.74□□□□□ -0.05
SDC4-201ENST00000372733 CKLFQ9UBR5 152 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 PRELID3BQ9Y3B1 194 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 KCNAB3O43448 404 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 SLC25A12O75746 678 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 AKR1C2P52895 323 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 AKR1C1Q04828 323 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 GPM6BQ13491 265 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 TOMM20Q15388 145 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 PRTGQ2VWP7 1150 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 PRAMEF17Q5VTA0 474 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 SLC18B1Q6NT16 456 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 C3orf33Q6P1S2 294 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 Q6ZSR6 202 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 OR1S2Q8NGQ3 325 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 METTL21AQ8WXB1 218 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 ZBTB8AQ96BR9 441 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 SLC25A36Q96CQ1 311 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 EDEM2Q9BV94 578 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 NXF5Q9H1B4 397 aaKnown RBP14.74□□□□□ -0.05
SDC4-201ENST00000372733 SCPEP1Q9HB40 452 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 ASF1BQ9NVP2 202 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 PCDHB10Q9UN67 800 aa14.74□□□□□ -0.05
SDC4-201ENST00000372733 VCANP13611 3396 aa14.73□□□□□ -0.05
SDC4-201ENST00000372733 FAM221BA6H8Z2 402 aa14.73□□□□□ -0.05
SDC4-201ENST00000372733 GPR31O00270 319 aa14.73□□□□□ -0.05
SDC4-201ENST00000372733 CLDN4O14493 209 aa14.73□□□□□ -0.05
SDC4-201ENST00000372733 SLC16A7O60669 478 aa14.73□□□□□ -0.05
SDC4-201ENST00000372733 TNFRSF4P43489 277 aa14.73□□□□□ -0.05
SDC4-201ENST00000372733 CCINQ13939 588 aa14.73□□□□□ -0.05
SDC4-201ENST00000372733 PABPC1L2AQ5JQF8 200 aa14.73□□□□□ -0.05
SDC4-201ENST00000372733 TEX30Q5JUR7 227 aa14.73□□□□□ -0.05
SDC4-201ENST00000372733 PAPD4Q6PIY7 484 aaKnown RBP14.73□□□□□ -0.05
SDC4-201ENST00000372733 OR13H1Q8NG92 308 aa14.73□□□□□ -0.05
SDC4-201ENST00000372733 MYOZ1Q9NP98 299 aaPredicted RBP14.73□□□□□ -0.05
SDC4-201ENST00000372733 SLC39A1Q9NY26 324 aa14.73□□□□□ -0.05
SDC4-201ENST00000372733 TTLL8A6PVC2 850 aa14.73□□□□□ -0.05
SDC4-201ENST00000372733 LMX1BO60663 402 aa14.73□□□□□ -0.05
SDC4-201ENST00000372733 OR6A2O95222 327 aa14.73□□□□□ -0.05
SDC4-201ENST00000372733 BGLAPP02818 100 aa14.73□□□□□ -0.05
SDC4-201ENST00000372733 SLC25A4P12235 298 aa14.73□□□□□ -0.05
SDC4-201ENST00000372733 CTLA4P16410 223 aa14.73□□□□□ -0.05
SDC4-201ENST00000372733 BDKRB2P30411 391 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms