RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 LSSP48449 732 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 DIO1P49895 249 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 PRMT2P55345 433 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 MFGE8Q08431 387 aaPredicted RBP4.89□□□□□ -1.63
ATG4A-204ENST00000372246 FABP9Q0Z7S8 132 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 SLC9A3R2Q15599 337 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 ZIC1Q15915 447 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 TMEM44Q2T9K0 475 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 MST1LQ2TV78 715 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 ARHGAP11BQ3KRB8 267 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 GLYATL3Q5SZD4 288 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 AVPI1Q5T686 147 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 STX12Q86Y82 276 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 GJD3Q8N144 294 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF619Q8N2I2 560 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 KDM8Q8N371 416 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 GTPBP8Q8N3Z3 284 aaPredicted RBP4.89□□□□□ -1.63
ATG4A-204ENST00000372246 OR5AP2Q8NGF4 316 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 MAFIPQ8WZ33 124 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 DCUN1D4Q92564 292 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 CCDC74AQ96AQ1 378 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 SEH1LQ96EE3 360 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 MRPL48Q96GC5 212 aaKnown RBP4.89□□□□□ -1.63
ATG4A-204ENST00000372246 AKR1E2Q96JD6 320 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 JSRP1Q96MG2 331 aaPredicted RBP4.89□□□□□ -1.63
ATG4A-204ENST00000372246 SMIM3Q9BZL3 60 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 SEMA6CQ9H3T2 930 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 DPEP2Q9H4A9 486 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 GAREM1Q9H706 876 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 CRLF2Q9HC73 371 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 BIN3Q9NQY0 253 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 OR5AC2Q9NZP5 309 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 CALML5Q9NZT1 146 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 B9D1Q9UPM9 204 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 SLC5A6Q9Y289 635 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 CSAG2Q9Y5P2 127 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 MRPS18BQ9Y676 258 aaKnown RBP4.89□□□□□ -1.63
ATG4A-204ENST00000372246 MED12Q93074 2177 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 KIAA1549LQ6ZVL6 1849 aa4.89□□□□□ -1.63
ATG4A-204ENST00000372246 SDK1Q7Z5N4 2213 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 TICRRQ7Z2Z1 1910 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 A0A0B4J2E0 115 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 A0A1B0GX12 115 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 NAP1L6A6NFF2 107 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 COLCA2A8K830 154 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 EFCAB7A8K855 629 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 XRCC3O43542 346 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 SSX5O60225 188 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 ITGA10O75578 1167 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 AQP8O94778 261 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 HLA-DQA2P01906 255 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 KLK3P07288 261 aaPredicted RBP4.88□□□□□ -1.63
ATG4A-204ENST00000372246 HEXBP07686 556 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 AKAIN1P0CW23 69 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 HOXB4P17483 251 aaPredicted RBP4.88□□□□□ -1.63
ATG4A-204ENST00000372246 ANOS1P23352 680 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 HOXC12P31275 282 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 SLC6A6P31641 620 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 CD80P33681 288 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 PRSS3P35030 304 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 TSFMP43897 325 aaKnown RBP4.88□□□□□ -1.63
ATG4A-204ENST00000372246 FHITP49789 147 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 ADPRHP54922 357 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 CXADRP78310 365 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 DMWDQ09019 674 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 ALKBH1Q13686 389 aaKnown RBP4.88□□□□□ -1.63
ATG4A-204ENST00000372246 RSPO4Q2I0M5 234 aaPredicted RBP4.88□□□□□ -1.63
ATG4A-204ENST00000372246 Q499Y3 187 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 CDNFQ49AH0 187 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 PDZD11Q5EBL8 140 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 WDR38Q5JTN6 314 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 FAM78AQ5JUQ0 283 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 NKAPLQ5M9Q1 402 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 CBLN3Q6UW01 205 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 SLC39A5Q6ZMH5 540 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 TTLL10Q6ZVT0 673 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 GRASPQ7Z6J2 395 aaPredicted RBP4.88□□□□□ -1.63
ATG4A-204ENST00000372246 JAZF1Q86VZ6 243 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 NRROSQ86YC3 692 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 DMRTC2Q8IXT2 367 aaPredicted RBP4.88□□□□□ -1.63
ATG4A-204ENST00000372246 SLC39A11Q8N1S5 342 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 SVBPQ8N300 66 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 BPIFB2Q8N4F0 458 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 PAQR4Q8N4S7 273 aaPredicted RBP4.88□□□□□ -1.63
ATG4A-204ENST00000372246 KCNRGQ8N5I3 272 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 C12orf76Q8N812 135 aaPredicted RBP4.88□□□□□ -1.63
ATG4A-204ENST00000372246 ZSCAN4Q8NAM6 433 aaPredicted RBP4.88□□□□□ -1.63
ATG4A-204ENST00000372246 KREMEN2Q8NCW0 462 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 OR1M1Q8NGA1 313 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 OR52R1Q8NGF1 315 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 FAM3DQ96BQ1 224 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 ZBTB8AQ96BR9 441 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 TOX2Q96NM4 488 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 NECAB3Q96P71 396 aaPredicted RBP4.88□□□□□ -1.63
ATG4A-204ENST00000372246 CMKLR1Q99788 373 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 C19orf43Q9BQ61 176 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 ZNF350Q9GZX5 532 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 SYT4Q9H2B2 425 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 RXFP3Q9NSD7 469 aa4.88□□□□□ -1.63
ATG4A-204ENST00000372246 TAS2R4Q9NYW5 299 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms